RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 RASGRF1Q13972 1273 aa20.26■□□□□ 0.83
TNXB-205ENST00000486148 ALX1Q15699 326 aa20.26■□□□□ 0.83
TNXB-205ENST00000486148 SGMS1Q86VZ5 419 aa20.26■□□□□ 0.83
TNXB-205ENST00000486148 ZNF34Q8IZ26 560 aa20.26■□□□□ 0.83
TNXB-205ENST00000486148 IFNL3Q8IZI9 196 aa20.26■□□□□ 0.83
TNXB-205ENST00000486148 CCAR2Q8N163 923 aaKnown RBP20.26■□□□□ 0.83
TNXB-205ENST00000486148 ZSWIM5Q9P217 1185 aa20.26■□□□□ 0.83
TNXB-205ENST00000486148 LRP5O75197 1615 aa20.25■□□□□ 0.83
TNXB-205ENST00000486148 MROH5Q6ZUA9 1318 aa20.25■□□□□ 0.83
TNXB-205ENST00000486148 PATL2C9JE40 543 aaKnown RBP20.25■□□□□ 0.83
TNXB-205ENST00000486148 GSDMDP57764 484 aa20.25■□□□□ 0.83
TNXB-205ENST00000486148 CLIC6Q96NY7 704 aa20.25■□□□□ 0.83
TNXB-205ENST00000486148 ARMT1Q9H993 441 aa20.25■□□□□ 0.83
TNXB-205ENST00000486148 ERVV-1B6SEH8 477 aa20.25■□□□□ 0.83
TNXB-205ENST00000486148 PPP6R2O75170 966 aa20.25■□□□□ 0.83
TNXB-205ENST00000486148 PTPN14Q15678 1187 aa20.25■□□□□ 0.83
TNXB-205ENST00000486148 TMC6Q7Z403 805 aa20.25■□□□□ 0.83
TNXB-205ENST00000486148 IMPACTQ9P2X3 320 aa20.25■□□□□ 0.83
TNXB-205ENST00000486148 TIGD1Q96MW7 591 aa20.24■□□□□ 0.83
TNXB-205ENST00000486148 NAPBQ9H115 298 aa20.24■□□□□ 0.83
TNXB-205ENST00000486148 DDX41Q9UJV9 622 aaKnown RBP20.24■□□□□ 0.83
TNXB-205ENST00000486148 DISP2A7MBM2 1401 aa20.24■□□□□ 0.83
TNXB-205ENST00000486148 ARMCX5Q6P1M9 558 aa20.24■□□□□ 0.83
TNXB-205ENST00000486148 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.24■□□□□ 0.83
TNXB-205ENST00000486148 HSD3B7Q9H2F3 369 aa20.24■□□□□ 0.83
TNXB-205ENST00000486148 LMOD1P29536 600 aaPredicted RBP20.23■□□□□ 0.83
TNXB-205ENST00000486148 SLC26A6Q9BXS9 759 aa20.23■□□□□ 0.83
TNXB-205ENST00000486148 TUBE1Q9UJT0 475 aa20.23■□□□□ 0.83
TNXB-205ENST00000486148 ARAP2Q8WZ64 1704 aa20.23■□□□□ 0.83
TNXB-205ENST00000486148 IFIT3O14879 490 aaKnown RBP20.23■□□□□ 0.83
TNXB-205ENST00000486148 PRKAB2O43741 272 aa20.23■□□□□ 0.83
TNXB-205ENST00000486148 IL6STP40189 918 aaPredicted RBP20.23■□□□□ 0.83
TNXB-205ENST00000486148 SEC31BQ9NQW1 1179 aa20.23■□□□□ 0.83
TNXB-205ENST00000486148 GSG1L2A8MUP6 293 aa20.22■□□□□ 0.83
TNXB-205ENST00000486148 SLC5A1P13866 664 aa20.22■□□□□ 0.83
TNXB-205ENST00000486148 MAP3K12Q12852 859 aa20.22■□□□□ 0.83
TNXB-205ENST00000486148 PNOCQ13519 176 aa20.22■□□□□ 0.83
TNXB-205ENST00000486148 SUSD4Q5VX71 490 aa20.22■□□□□ 0.83
TNXB-205ENST00000486148 RESP18Q5W5W9 173 aa20.22■□□□□ 0.83
TNXB-205ENST00000486148 JMYQ8N9B5 988 aa20.22■□□□□ 0.83
TNXB-205ENST00000486148 SLC12A7Q9Y666 1083 aa20.22■□□□□ 0.83
TNXB-205ENST00000486148 ATP1A3P13637 1013 aa20.22■□□□□ 0.83
TNXB-205ENST00000486148 LIFRP42702 1097 aa20.22■□□□□ 0.83
TNXB-205ENST00000486148 TRIM29Q14134 588 aa20.22■□□□□ 0.83
TNXB-205ENST00000486148 SYCP1Q15431 976 aa20.22■□□□□ 0.83
TNXB-205ENST00000486148 KCND1Q9NSA2 647 aa20.22■□□□□ 0.83
TNXB-205ENST00000486148 FAM237AA0A1B0GTK4 181 aa20.21■□□□□ 0.83
TNXB-205ENST00000486148 GUCY1A2P33402 732 aa20.21■□□□□ 0.83
TNXB-205ENST00000486148 CHD4Q14839 1912 aa20.21■□□□□ 0.83
TNXB-205ENST00000486148 IKBKBO14920 756 aa20.21■□□□□ 0.83
TNXB-205ENST00000486148 TPM4P67936 248 aa20.21■□□□□ 0.83
TNXB-205ENST00000486148 AKNAD1Q5T1N1 836 aa20.21■□□□□ 0.83
TNXB-205ENST00000486148 PLCD3Q8N3E9 789 aa20.21■□□□□ 0.83
TNXB-205ENST00000486148 DOCK2Q92608 1830 aa20.21■□□□□ 0.83
TNXB-205ENST00000486148 FANCCQ00597 558 aa20.2■□□□□ 0.82
TNXB-205ENST00000486148 SSRP1Q08945 709 aaKnown RBP20.2■□□□□ 0.82
TNXB-205ENST00000486148 E4F1Q66K89 784 aaPredicted RBP20.2■□□□□ 0.82
TNXB-205ENST00000486148 LCORLQ8N3X6 602 aa20.2■□□□□ 0.82
TNXB-205ENST00000486148 ZKSCAN3Q9BRR0 538 aa20.2■□□□□ 0.82
TNXB-205ENST00000486148 FMNL1O95466 1100 aaPredicted RBP20.2■□□□□ 0.82
TNXB-205ENST00000486148 LONRF3Q496Y0 759 aa20.2■□□□□ 0.82
TNXB-205ENST00000486148 RRP12Q5JTH9 1297 aaKnown RBP20.2■□□□□ 0.82
TNXB-205ENST00000486148 METTL16Q86W50 562 aaKnown RBP20.2■□□□□ 0.82
TNXB-205ENST00000486148 STK11IPQ8N1F8 1099 aa20.2■□□□□ 0.82
TNXB-205ENST00000486148 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.2■□□□□ 0.82
TNXB-205ENST00000486148 MORC2Q9Y6X9 1032 aaPredicted RBP20.2■□□□□ 0.82
TNXB-205ENST00000486148 STRCQ7RTU9 1775 aa20.2■□□□□ 0.82
TNXB-205ENST00000486148 TERF2Q15554 542 aa20.2■□□□□ 0.82
TNXB-205ENST00000486148 CCDC150Q8NCX0 1101 aa20.2■□□□□ 0.82
TNXB-205ENST00000486148 MPHOSPH8Q99549 860 aa20.2■□□□□ 0.82
TNXB-205ENST00000486148 NHSL1Q5SYE7 1610 aa20.19■□□□□ 0.82
TNXB-205ENST00000486148 STK36Q9NRP7 1315 aa20.19■□□□□ 0.82
TNXB-205ENST00000486148 BTBD18B2RXH4 712 aa20.19■□□□□ 0.82
TNXB-205ENST00000486148 CDK11BP21127 795 aaKnown RBP20.19■□□□□ 0.82
TNXB-205ENST00000486148 BCAMP50895 628 aa20.19■□□□□ 0.82
TNXB-205ENST00000486148 MFSD6Q6ZSS7 791 aa20.19■□□□□ 0.82
TNXB-205ENST00000486148 FOXP4Q8IVH2 680 aaPredicted RBP20.19■□□□□ 0.82
TNXB-205ENST00000486148 TIAM2Q8IVF5 1701 aa20.19■□□□□ 0.82
TNXB-205ENST00000486148 CUTAO60888 179 aa20.19■□□□□ 0.82
TNXB-205ENST00000486148 IFNAR1P17181 557 aa20.19■□□□□ 0.82
TNXB-205ENST00000486148 SPECC1Q5M775 1068 aa20.19■□□□□ 0.82
TNXB-205ENST00000486148 DPF2Q92785 391 aa20.19■□□□□ 0.82
TNXB-205ENST00000486148 SFPQP23246 707 aaKnown RBP eCLIP20.18■□□□□ 0.82
TNXB-205ENST00000486148 NOSTRINQ8IVI9 506 aa20.18■□□□□ 0.82
TNXB-205ENST00000486148 KRT23Q9C075 422 aa20.18■□□□□ 0.82
TNXB-205ENST00000486148 CNNM2Q9H8M5 875 aa20.18■□□□□ 0.82
TNXB-205ENST00000486148 TOMM22Q9NS69 142 aa20.18■□□□□ 0.82
TNXB-205ENST00000486148 KCNH3Q9ULD8 1083 aa20.18■□□□□ 0.82
TNXB-205ENST00000486148 KCNJ14Q9UNX9 436 aa20.18■□□□□ 0.82
TNXB-205ENST00000486148 SLC4A4Q9Y6R1 1079 aa20.18■□□□□ 0.82
TNXB-205ENST00000486148 EXOC5O00471 708 aa20.18■□□□□ 0.82
TNXB-205ENST00000486148 TDO2P48775 406 aa20.18■□□□□ 0.82
TNXB-205ENST00000486148 TOB1P50616 345 aaPredicted RBP20.18■□□□□ 0.82
TNXB-205ENST00000486148 CMTR1Q8N1G2 835 aaKnown RBP20.18■□□□□ 0.82
TNXB-205ENST00000486148 KIF18AQ8NI77 898 aa20.18■□□□□ 0.82
TNXB-205ENST00000486148 AK7Q96M32 723 aa20.18■□□□□ 0.82
TNXB-205ENST00000486148 ZNF215Q9UL58 517 aaPredicted RBP20.18■□□□□ 0.82
TNXB-205ENST00000486148 FOXN1O15353 648 aa20.17■□□□□ 0.82
TNXB-205ENST00000486148 EIF5P55010 431 aaKnown RBP20.17■□□□□ 0.82
TNXB-205ENST00000486148 KRBA2Q6ZNG9 492 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms