RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 POTEHQ6S545 545 aa11.27□□□□□ -0.61
SHROOM3-207ENST00000485780 CERS3Q8IU89 383 aa11.27□□□□□ -0.61
SHROOM3-207ENST00000485780 MAGEB6Q8N7X4 407 aa11.27□□□□□ -0.61
SHROOM3-207ENST00000485780 RIOK1Q9BRS2 568 aaKnown RBP11.27□□□□□ -0.61
SHROOM3-207ENST00000485780 IDI2Q9BXS1 227 aa11.27□□□□□ -0.61
SHROOM3-207ENST00000485780 VEZTQ9HBM0 779 aa11.27□□□□□ -0.61
SHROOM3-207ENST00000485780 ZNF70Q9UC06 446 aaPredicted RBP11.27□□□□□ -0.61
SHROOM3-207ENST00000485780 ZNF532Q9HCE3 1301 aa11.27□□□□□ -0.61
SHROOM3-207ENST00000485780 CLRN2A0PK11 232 aa11.26□□□□□ -0.61
SHROOM3-207ENST00000485780 CAPN15O75808 1086 aa11.26□□□□□ -0.61
SHROOM3-207ENST00000485780 CHGBP05060 677 aa11.26□□□□□ -0.61
SHROOM3-207ENST00000485780 LRRFIP1Q32MZ4 808 aaKnown RBP11.26□□□□□ -0.61
SHROOM3-207ENST00000485780 BMP2KLQ5H9B9 411 aa11.26□□□□□ -0.61
SHROOM3-207ENST00000485780 CDC42EP5Q6NZY7 148 aa11.26□□□□□ -0.61
SHROOM3-207ENST00000485780 ARMC9Q7Z3E5 817 aa11.26□□□□□ -0.61
SHROOM3-207ENST00000485780 SKAP1Q86WV1 359 aa11.26□□□□□ -0.61
SHROOM3-207ENST00000485780 TDRD3Q9H7E2 651 aaKnown RBP11.26□□□□□ -0.61
SHROOM3-207ENST00000485780 PPP2R3BQ9Y5P8 575 aa11.26□□□□□ -0.61
SHROOM3-207ENST00000485780 LAMB1P07942 1786 aa11.26□□□□□ -0.61
SHROOM3-207ENST00000485780 BAZ2AQ9UIF9 1905 aaKnown RBP11.25□□□□□ -0.61
SHROOM3-207ENST00000485780 FAM155AB1AL88 458 aaPredicted RBP11.25□□□□□ -0.61
SHROOM3-207ENST00000485780 UBE2Q2LH0YL09 131 aa11.25□□□□□ -0.61
SHROOM3-207ENST00000485780 RNF113AO15541 343 aaKnown RBP11.25□□□□□ -0.61
SHROOM3-207ENST00000485780 WDHD1O75717 1129 aaPredicted RBP11.25□□□□□ -0.61
SHROOM3-207ENST00000485780 SLC10A3P09131 477 aa11.25□□□□□ -0.61
SHROOM3-207ENST00000485780 PLCG2P16885 1265 aa11.25□□□□□ -0.61
SHROOM3-207ENST00000485780 KIF23Q02241 960 aaPredicted RBP11.25□□□□□ -0.61
SHROOM3-207ENST00000485780 TNFAIP1Q13829 316 aa11.25□□□□□ -0.61
SHROOM3-207ENST00000485780 PRKG1Q13976 671 aa11.25□□□□□ -0.61
SHROOM3-207ENST00000485780 ZMYM1Q5SVZ6 1142 aa11.25□□□□□ -0.61
SHROOM3-207ENST00000485780 FAM83AQ86UY5 434 aa11.25□□□□□ -0.61
SHROOM3-207ENST00000485780 APPBP2Q92624 585 aa11.25□□□□□ -0.61
SHROOM3-207ENST00000485780 FSD1Q9BTV5 496 aa11.25□□□□□ -0.61
SHROOM3-207ENST00000485780 DEFB129Q9H1M3 183 aa11.25□□□□□ -0.61
SHROOM3-207ENST00000485780 TSKSQ9UJT2 592 aa11.25□□□□□ -0.61
SHROOM3-207ENST00000485780 ATRNL1Q5VV63 1379 aa11.25□□□□□ -0.61
SHROOM3-207ENST00000485780 OTOFQ9HC10 1997 aa11.25□□□□□ -0.61
SHROOM3-207ENST00000485780 SSC5DA1L4H1 1573 aa11.24□□□□□ -0.61
SHROOM3-207ENST00000485780 BAG3O95817 575 aa11.24□□□□□ -0.61
SHROOM3-207ENST00000485780 SDSP20132 328 aa11.24□□□□□ -0.61
SHROOM3-207ENST00000485780 SLFNL1Q499Z3 407 aa11.24□□□□□ -0.61
SHROOM3-207ENST00000485780 MOB2Q70IA6 237 aa11.24□□□□□ -0.61
SHROOM3-207ENST00000485780 RASAL3Q86YV0 1011 aa11.24□□□□□ -0.61
SHROOM3-207ENST00000485780 OSBP2Q969R2 916 aa11.24□□□□□ -0.61
SHROOM3-207ENST00000485780 ZIC5Q96T25 663 aa11.24□□□□□ -0.61
SHROOM3-207ENST00000485780 AATFQ9NY61 560 aaKnown RBP eCLIP11.24□□□□□ -0.61
SHROOM3-207ENST00000485780 FAM198AQ9UFP1 575 aa11.24□□□□□ -0.61
SHROOM3-207ENST00000485780 GTF3C3Q9Y5Q9 886 aa11.24□□□□□ -0.61
SHROOM3-207ENST00000485780 TRIM6-TRIM34B2RNG4 842 aa11.23□□□□□ -0.61
SHROOM3-207ENST00000485780 PPP1R12BO60237 982 aaPredicted RBP11.23□□□□□ -0.61
SHROOM3-207ENST00000485780 ENTPD3O75355 529 aa11.23□□□□□ -0.61
SHROOM3-207ENST00000485780 NFIAQ12857 509 aa11.23□□□□□ -0.61
SHROOM3-207ENST00000485780 SUPT20HL1Q3ZLR7 823 aa11.23□□□□□ -0.61
SHROOM3-207ENST00000485780 REM2Q8IYK8 340 aaPredicted RBP11.23□□□□□ -0.61
SHROOM3-207ENST00000485780 MIGA1Q8NAN2 632 aa11.23□□□□□ -0.61
SHROOM3-207ENST00000485780 SH3RF3Q8TEJ3 882 aaPredicted RBP11.23□□□□□ -0.61
SHROOM3-207ENST00000485780 TEPSINQ96N21 525 aa11.23□□□□□ -0.61
SHROOM3-207ENST00000485780 PUS7LQ9H0K6 701 aaKnown RBP11.23□□□□□ -0.61
SHROOM3-207ENST00000485780 DDX4Q9NQI0 724 aaKnown RBP11.23□□□□□ -0.61
SHROOM3-207ENST00000485780 USP40Q9NVE5 1235 aa11.23□□□□□ -0.61
SHROOM3-207ENST00000485780 TMOD2Q9NZR1 351 aa11.23□□□□□ -0.61
SHROOM3-207ENST00000485780 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.23□□□□□ -0.61
SHROOM3-207ENST00000485780 ANGEL1Q9UNK9 670 aaKnown RBP11.23□□□□□ -0.61
SHROOM3-207ENST00000485780 LAMA4Q16363 1823 aa11.23□□□□□ -0.61
SHROOM3-207ENST00000485780 MAGEB6P1A0A0J9YX57 407 aa11.22□□□□□ -0.61
SHROOM3-207ENST00000485780 HIP1O00291 1037 aa11.22□□□□□ -0.61
SHROOM3-207ENST00000485780 MBD4O95243 580 aa11.22□□□□□ -0.61
SHROOM3-207ENST00000485780 FLT1P17948 1338 aa11.22□□□□□ -0.61
SHROOM3-207ENST00000485780 TNNI2P48788 182 aa11.22□□□□□ -0.61
SHROOM3-207ENST00000485780 RGS3P49796 1198 aa11.22□□□□□ -0.61
SHROOM3-207ENST00000485780 DYNLL1P63167 89 aaKnown RBP11.22□□□□□ -0.61
SHROOM3-207ENST00000485780 LCORLQ8N3X6 602 aa11.22□□□□□ -0.61
SHROOM3-207ENST00000485780 FAM151AQ8WW52 585 aa11.22□□□□□ -0.61
SHROOM3-207ENST00000485780 NOL10Q9BSC4 688 aaKnown RBP11.22□□□□□ -0.61
SHROOM3-207ENST00000485780 HELLSQ9NRZ9 838 aa11.22□□□□□ -0.61
SHROOM3-207ENST00000485780 RAD50Q92878 1312 aa11.21□□□□□ -0.61
SHROOM3-207ENST00000485780 A0A0D9SFI3 127 aa11.21□□□□□ -0.61
SHROOM3-207ENST00000485780 M0R2C6 588 aa11.21□□□□□ -0.61
SHROOM3-207ENST00000485780 CACNB3P54284 484 aa11.21□□□□□ -0.61
SHROOM3-207ENST00000485780 C1QBPQ07021 282 aaKnown RBP11.21□□□□□ -0.61
SHROOM3-207ENST00000485780 MKRN3Q13064 507 aaKnown RBP11.21□□□□□ -0.61
SHROOM3-207ENST00000485780 RASA3Q14644 834 aa11.21□□□□□ -0.61
SHROOM3-207ENST00000485780 TEX11Q8IYF3 940 aa11.21□□□□□ -0.61
SHROOM3-207ENST00000485780 RILPL2Q969X0 211 aa11.21□□□□□ -0.61
SHROOM3-207ENST00000485780 STRBPQ96SI9 672 aaKnown RBP11.21□□□□□ -0.61
SHROOM3-207ENST00000485780 OSBPL5Q9H0X9 879 aaPredicted RBP11.21□□□□□ -0.61
SHROOM3-207ENST00000485780 SAGE1Q9NXZ1 904 aa11.21□□□□□ -0.61
SHROOM3-207ENST00000485780 MYH8P13535 1937 aa11.21□□□□□ -0.62
SHROOM3-207ENST00000485780 TCP10L2B9ZVM9 353 aa11.2□□□□□ -0.62
SHROOM3-207ENST00000485780 FOXP2O15409 715 aa11.2□□□□□ -0.62
SHROOM3-207ENST00000485780 GPAA1O43292 621 aa11.2□□□□□ -0.62
SHROOM3-207ENST00000485780 TRPA1O75762 1119 aa11.2□□□□□ -0.62
SHROOM3-207ENST00000485780 CHMLP26374 656 aa11.2□□□□□ -0.62
SHROOM3-207ENST00000485780 IREB2P48200 963 aaKnown RBP11.2□□□□□ -0.62
SHROOM3-207ENST00000485780 SREBF2Q12772 1141 aa11.2□□□□□ -0.62
SHROOM3-207ENST00000485780 NMIQ13287 307 aaPredicted RBP11.2□□□□□ -0.62
SHROOM3-207ENST00000485780 NBPF12Q5TAG4 269 aaPredicted RBP11.2□□□□□ -0.62
SHROOM3-207ENST00000485780 SH3BP5LQ7L8J4 393 aa11.2□□□□□ -0.62
SHROOM3-207ENST00000485780 SLC10A4Q96EP9 437 aa11.2□□□□□ -0.62
SHROOM3-207ENST00000485780 FAM227BQ96M60 508 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms