RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 SNRPBP14678 240 aaKnown RBP7.3□□□□□ -1.24
NHLRC3-205ENST00000485407 NOS2P35228 1153 aa7.3□□□□□ -1.24
NHLRC3-205ENST00000485407 TEAD4Q15561 434 aa7.3□□□□□ -1.24
NHLRC3-205ENST00000485407 PI16Q6UXB8 463 aa7.3□□□□□ -1.24
NHLRC3-205ENST00000485407 TREML4Q6UXN2 200 aa7.3□□□□□ -1.24
NHLRC3-205ENST00000485407 TREML1Q86YW5 311 aa7.3□□□□□ -1.24
NHLRC3-205ENST00000485407 MPNDQ8N594 471 aa7.3□□□□□ -1.24
NHLRC3-205ENST00000485407 XAGE2Q96GT9 111 aa7.3□□□□□ -1.24
NHLRC3-205ENST00000485407 OSBPL7Q9BZF2 842 aa7.3□□□□□ -1.24
NHLRC3-205ENST00000485407 SENP2Q9HC62 589 aa7.3□□□□□ -1.24
NHLRC3-205ENST00000485407 METTL14Q9HCE5 456 aaKnown RBP7.3□□□□□ -1.24
NHLRC3-205ENST00000485407 FAM13BQ9NYF5 915 aa7.3□□□□□ -1.24
NHLRC3-205ENST00000485407 PARP3Q9Y6F1 533 aa7.3□□□□□ -1.24
NHLRC3-205ENST00000485407 LTN1O94822 1766 aa7.3□□□□□ -1.24
NHLRC3-205ENST00000485407 COL5A2P05997 1499 aaPredicted RBP7.3□□□□□ -1.24
NHLRC3-205ENST00000485407 MAP3K19Q56UN5 1328 aa7.29□□□□□ -1.24
NHLRC3-205ENST00000485407 SPATA31A1Q5TZJ5 1347 aa7.29□□□□□ -1.24
NHLRC3-205ENST00000485407 WDR17Q8IZU2 1322 aa7.29□□□□□ -1.24
NHLRC3-205ENST00000485407 PLSCR1O15162 318 aa7.29□□□□□ -1.24
NHLRC3-205ENST00000485407 USP17L7P0C7H9 530 aa7.29□□□□□ -1.24
NHLRC3-205ENST00000485407 XRCC5P13010 732 aaKnown RBP7.29□□□□□ -1.24
NHLRC3-205ENST00000485407 AMPHP49418 695 aa7.29□□□□□ -1.24
NHLRC3-205ENST00000485407 TCP11L2Q8N4U5 519 aa7.29□□□□□ -1.24
NHLRC3-205ENST00000485407 EPS8L3Q8TE67 593 aaKnown RBP7.29□□□□□ -1.24
NHLRC3-205ENST00000485407 PHACTR1Q9C0D0 580 aa7.29□□□□□ -1.24
NHLRC3-205ENST00000485407 FAM8A1Q9UBU6 413 aa7.29□□□□□ -1.24
NHLRC3-205ENST00000485407 NOP58Q9Y2X3 529 aaKnown RBP7.29□□□□□ -1.24
NHLRC3-205ENST00000485407 ADCY9O60503 1353 aa7.29□□□□□ -1.24
NHLRC3-205ENST00000485407 CRB1P82279 1406 aa7.28□□□□□ -1.24
NHLRC3-205ENST00000485407 TNS2Q63HR2 1409 aa7.28□□□□□ -1.24
NHLRC3-205ENST00000485407 LILRA1O75019 489 aa7.28□□□□□ -1.24
NHLRC3-205ENST00000485407 IL2RAP01589 272 aa7.28□□□□□ -1.24
NHLRC3-205ENST00000485407 HOXC9P31274 260 aa7.28□□□□□ -1.24
NHLRC3-205ENST00000485407 IRS1P35568 1242 aa7.28□□□□□ -1.24
NHLRC3-205ENST00000485407 ST13P50502 369 aaKnown RBP7.28□□□□□ -1.24
NHLRC3-205ENST00000485407 HIRAP54198 1017 aaPredicted RBP7.28□□□□□ -1.24
NHLRC3-205ENST00000485407 USPL1Q5W0Q7 1092 aa7.28□□□□□ -1.24
NHLRC3-205ENST00000485407 MORC1Q86VD1 984 aa7.28□□□□□ -1.24
NHLRC3-205ENST00000485407 DHX37Q8IY37 1157 aaKnown RBP7.28□□□□□ -1.24
NHLRC3-205ENST00000485407 ZNF526Q8TF50 670 aaPredicted RBP7.28□□□□□ -1.24
NHLRC3-205ENST00000485407 CNKSR1Q969H4 720 aa7.28□□□□□ -1.24
NHLRC3-205ENST00000485407 KIFC2Q96AC6 838 aa7.28□□□□□ -1.24
NHLRC3-205ENST00000485407 CCDC74AQ96AQ1 378 aa7.28□□□□□ -1.24
NHLRC3-205ENST00000485407 CARD10Q9BWT7 1032 aa7.28□□□□□ -1.24
NHLRC3-205ENST00000485407 COPRSQ9NQ92 184 aa7.28□□□□□ -1.24
NHLRC3-205ENST00000485407 STRN4Q9NRL3 753 aa7.28□□□□□ -1.24
NHLRC3-205ENST00000485407 FLT4P35916 1363 aa7.28□□□□□ -1.24
NHLRC3-205ENST00000485407 RGPD3A6NKT7 1758 aaPredicted RBP7.28□□□□□ -1.24
NHLRC3-205ENST00000485407 RGPD4Q7Z3J3 1758 aa7.28□□□□□ -1.24
NHLRC3-205ENST00000485407 RGPD5Q99666 1765 aa7.28□□□□□ -1.24
NHLRC3-205ENST00000485407 CAPN5O15484 640 aaPredicted RBP7.27□□□□□ -1.25
NHLRC3-205ENST00000485407 ADD1P35611 737 aaKnown RBP7.27□□□□□ -1.25
NHLRC3-205ENST00000485407 NNTQ13423 1086 aa7.27□□□□□ -1.25
NHLRC3-205ENST00000485407 RRS1Q15050 365 aaKnown RBP7.27□□□□□ -1.25
NHLRC3-205ENST00000485407 PPP1R26Q5T8A7 1209 aaPredicted RBP7.27□□□□□ -1.25
NHLRC3-205ENST00000485407 NBPF6Q5VWK0 638 aa7.27□□□□□ -1.25
NHLRC3-205ENST00000485407 TOM1L2Q6ZVM7 507 aa7.27□□□□□ -1.25
NHLRC3-205ENST00000485407 TRIM46Q7Z4K8 759 aa7.27□□□□□ -1.25
NHLRC3-205ENST00000485407 FILIP1Q7Z7B0 1213 aa7.27□□□□□ -1.25
NHLRC3-205ENST00000485407 CERS3Q8IU89 383 aa7.27□□□□□ -1.25
NHLRC3-205ENST00000485407 CCDC116Q8IYX3 515 aa7.27□□□□□ -1.25
NHLRC3-205ENST00000485407 ZDHHC1Q8WTX9 485 aa7.27□□□□□ -1.25
NHLRC3-205ENST00000485407 NBPF4Q96M43 638 aa7.27□□□□□ -1.25
NHLRC3-205ENST00000485407 SRPK1Q96SB4 655 aaKnown RBP7.27□□□□□ -1.25
NHLRC3-205ENST00000485407 POLKQ9UBT6 870 aa7.27□□□□□ -1.25
NHLRC3-205ENST00000485407 INSRP06213 1382 aa7.27□□□□□ -1.25
NHLRC3-205ENST00000485407 FAM208AQ9UK61 1670 aaKnown RBP7.27□□□□□ -1.25
NHLRC3-205ENST00000485407 BMP1P13497 986 aa7.26□□□□□ -1.25
NHLRC3-205ENST00000485407 GRM5P41594 1212 aa7.26□□□□□ -1.25
NHLRC3-205ENST00000485407 NFX1Q12986 1120 aaKnown RBP7.26□□□□□ -1.25
NHLRC3-205ENST00000485407 ERMP1Q7Z2K6 904 aa7.26□□□□□ -1.25
NHLRC3-205ENST00000485407 SEC16BQ96JE7 1060 aa7.26□□□□□ -1.25
NHLRC3-205ENST00000485407 CDK15Q96Q40 435 aa7.26□□□□□ -1.25
NHLRC3-205ENST00000485407 ESYT1Q9BSJ8 1104 aa7.26□□□□□ -1.25
NHLRC3-205ENST00000485407 SPON2Q9BUD6 331 aa7.26□□□□□ -1.25
NHLRC3-205ENST00000485407 TRIM55Q9BYV6 548 aa7.26□□□□□ -1.25
NHLRC3-205ENST00000485407 KBTBD4Q9NVX7 518 aa7.26□□□□□ -1.25
NHLRC3-205ENST00000485407 STK32BQ9NY57 414 aa7.26□□□□□ -1.25
NHLRC3-205ENST00000485407 KLHL42Q9P2K6 505 aa7.26□□□□□ -1.25
NHLRC3-205ENST00000485407 COL4A3BPQ9Y5P4 624 aa7.26□□□□□ -1.25
NHLRC3-205ENST00000485407 SMG6Q86US8 1419 aaKnown RBP7.26□□□□□ -1.25
NHLRC3-205ENST00000485407 PLEKHG2Q9H7P9 1386 aa7.25□□□□□ -1.25
NHLRC3-205ENST00000485407 WDR90Q96KV7 1748 aa7.25□□□□□ -1.25
NHLRC3-205ENST00000485407 U2SURPO15042 1029 aaKnown RBP7.25□□□□□ -1.25
NHLRC3-205ENST00000485407 TOMM70O94826 608 aa7.25□□□□□ -1.25
NHLRC3-205ENST00000485407 ADH1CP00326 375 aa7.25□□□□□ -1.25
NHLRC3-205ENST00000485407 YBX3P16989 372 aaKnown RBP eCLIP7.25□□□□□ -1.25
NHLRC3-205ENST00000485407 FBLN1P23142 703 aa7.25□□□□□ -1.25
NHLRC3-205ENST00000485407 SLC15A2Q16348 729 aa7.25□□□□□ -1.25
NHLRC3-205ENST00000485407 HSP90AB2PQ58FF8 381 aa7.25□□□□□ -1.25
NHLRC3-205ENST00000485407 KIAA0825Q8IV33 1275 aa7.25□□□□□ -1.25
NHLRC3-205ENST00000485407 RASGRP4Q8TDF6 673 aa7.25□□□□□ -1.25
NHLRC3-205ENST00000485407 ANKRD24Q8TF21 1146 aa7.25□□□□□ -1.25
NHLRC3-205ENST00000485407 MKL1Q969V6 931 aa7.25□□□□□ -1.25
NHLRC3-205ENST00000485407 BRINP2Q9C0B6 783 aa7.25□□□□□ -1.25
NHLRC3-205ENST00000485407 ZNF408Q9H9D4 720 aa7.25□□□□□ -1.25
NHLRC3-205ENST00000485407 FOXD3Q9UJU5 478 aaPredicted RBP7.25□□□□□ -1.25
NHLRC3-205ENST00000485407 GADD45BO75293 160 aaPredicted RBP7.24□□□□□ -1.25
NHLRC3-205ENST00000485407 TNFRSF21O75509 655 aa7.24□□□□□ -1.25
NHLRC3-205ENST00000485407 WFS1O76024 890 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms