RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 FAM177BA6PVY3 158 aa10.64□□□□□ -0.71
USP16-206ENST00000485067 KCNQ2O43526 872 aa10.64□□□□□ -0.71
USP16-206ENST00000485067 SETSIPP0DME0 302 aa10.64□□□□□ -0.71
USP16-206ENST00000485067 HSPD1P10809 573 aaKnown RBP10.64□□□□□ -0.71
USP16-206ENST00000485067 EXOSC10Q01780 885 aaKnown RBP10.64□□□□□ -0.71
USP16-206ENST00000485067 STK3Q13188 491 aa10.64□□□□□ -0.71
USP16-206ENST00000485067 IFIT5Q13325 482 aaKnown RBP10.64□□□□□ -0.71
USP16-206ENST00000485067 TTC39AQ5SRH9 613 aa10.64□□□□□ -0.71
USP16-206ENST00000485067 GIGYF2Q6Y7W6 1299 aaKnown RBP10.64□□□□□ -0.71
USP16-206ENST00000485067 PTF1AQ7RTS3 328 aa10.64□□□□□ -0.71
USP16-206ENST00000485067 GPIHBP1Q8IV16 184 aa10.64□□□□□ -0.71
USP16-206ENST00000485067 SMARCC2Q8TAQ2 1214 aa10.64□□□□□ -0.71
USP16-206ENST00000485067 TBC1D22AQ8WUA7 517 aa10.64□□□□□ -0.71
USP16-206ENST00000485067 FUCA2Q9BTY2 467 aa10.64□□□□□ -0.71
USP16-206ENST00000485067 NRAPQ86VF7 1730 aa10.64□□□□□ -0.71
USP16-206ENST00000485067 MAST3O60307 1309 aa10.64□□□□□ -0.71
USP16-206ENST00000485067 CCDC192P0DO97 292 aa10.64□□□□□ -0.71
USP16-206ENST00000485067 PEX19P40855 299 aa10.64□□□□□ -0.71
USP16-206ENST00000485067 SCARF1Q14162 830 aa10.64□□□□□ -0.71
USP16-206ENST00000485067 PI16Q6UXB8 463 aa10.64□□□□□ -0.71
USP16-206ENST00000485067 CCDC91Q7Z6B0 441 aa10.64□□□□□ -0.71
USP16-206ENST00000485067 TTC6Q86TZ1 520 aa10.64□□□□□ -0.71
USP16-206ENST00000485067 NLRP10Q86W26 655 aa10.64□□□□□ -0.71
USP16-206ENST00000485067 METTL14Q9HCE5 456 aaKnown RBP10.64□□□□□ -0.71
USP16-206ENST00000485067 CFAP45Q9UL16 551 aa10.64□□□□□ -0.71
USP16-206ENST00000485067 UBN2Q6ZU65 1347 aa10.63□□□□□ -0.71
USP16-206ENST00000485067 GOLGA6L4A6NEF3 574 aa10.63□□□□□ -0.71
USP16-206ENST00000485067 H3BQV1 296 aa10.63□□□□□ -0.71
USP16-206ENST00000485067 CAND2O75155 1236 aa10.63□□□□□ -0.71
USP16-206ENST00000485067 FAM163BP0C2L3 166 aa10.63□□□□□ -0.71
USP16-206ENST00000485067 SF3B2Q13435 895 aaKnown RBP10.63□□□□□ -0.71
USP16-206ENST00000485067 PPP2R5AQ15172 486 aa10.63□□□□□ -0.71
USP16-206ENST00000485067 MAP9Q49MG5 647 aa10.63□□□□□ -0.71
USP16-206ENST00000485067 IFFO2Q5TF58 517 aa10.63□□□□□ -0.71
USP16-206ENST00000485067 NAA16Q6N069 864 aaPredicted RBP10.63□□□□□ -0.71
USP16-206ENST00000485067 BRF1Q92994 677 aa10.63□□□□□ -0.71
USP16-206ENST00000485067 ZNF274Q96GC6 653 aaPredicted RBP10.63□□□□□ -0.71
USP16-206ENST00000485067 XAGE2Q96GT9 111 aa10.63□□□□□ -0.71
USP16-206ENST00000485067 GREM2Q9H772 168 aa10.63□□□□□ -0.71
USP16-206ENST00000485067 RMI1Q9H9A7 625 aa10.63□□□□□ -0.71
USP16-206ENST00000485067 CTDP1Q9Y5B0 961 aaPredicted RBP10.63□□□□□ -0.71
USP16-206ENST00000485067 NUP98P52948 1817 aa10.63□□□□□ -0.71
USP16-206ENST00000485067 E7EWF7 191 aa10.63□□□□□ -0.71
USP16-206ENST00000485067 IPO5O00410 1097 aaKnown RBP10.63□□□□□ -0.71
USP16-206ENST00000485067 FLT3P36888 993 aa10.63□□□□□ -0.71
USP16-206ENST00000485067 ITPK1Q13572 414 aa10.63□□□□□ -0.71
USP16-206ENST00000485067 DDB1Q16531 1140 aa10.63□□□□□ -0.71
USP16-206ENST00000485067 ATL3Q6DD88 541 aa10.63□□□□□ -0.71
USP16-206ENST00000485067 STOX1Q6ZVD7 989 aa10.63□□□□□ -0.71
USP16-206ENST00000485067 FERMT3Q86UX7 667 aa10.63□□□□□ -0.71
USP16-206ENST00000485067 ZNF512BQ96KM6 892 aaPredicted RBP10.63□□□□□ -0.71
USP16-206ENST00000485067 PLSCR2Q9NRY7 297 aa10.63□□□□□ -0.71
USP16-206ENST00000485067 DDX19AQ9NUU7 478 aaKnown RBP10.63□□□□□ -0.71
USP16-206ENST00000485067 PUF60Q9UHX1 559 aaKnown RBP10.63□□□□□ -0.71
USP16-206ENST00000485067 TPX2Q9ULW0 747 aaKnown RBP10.63□□□□□ -0.71
USP16-206ENST00000485067 MYH14Q7Z406 1995 aaKnown RBP10.62□□□□□ -0.71
USP16-206ENST00000485067 PPP1R37O75864 691 aa10.62□□□□□ -0.71
USP16-206ENST00000485067 HCLS1P14317 486 aaPredicted RBP10.62□□□□□ -0.71
USP16-206ENST00000485067 APLP1P51693 650 aa10.62□□□□□ -0.71
USP16-206ENST00000485067 SCRN1Q12765 414 aa10.62□□□□□ -0.71
USP16-206ENST00000485067 RESTQ13127 1097 aa10.62□□□□□ -0.71
USP16-206ENST00000485067 MAP3K11Q16584 847 aa10.62□□□□□ -0.71
USP16-206ENST00000485067 ATP2B3Q16720 1220 aa10.62□□□□□ -0.71
USP16-206ENST00000485067 LEO1Q8WVC0 666 aaPredicted RBP10.62□□□□□ -0.71
USP16-206ENST00000485067 NUP62CLQ9H1M0 184 aa10.62□□□□□ -0.71
USP16-206ENST00000485067 SERPINA10Q9UK55 444 aa10.62□□□□□ -0.71
USP16-206ENST00000485067 SNAP23O00161 211 aa10.61□□□□□ -0.71
USP16-206ENST00000485067 CASQ1P31415 396 aa10.61□□□□□ -0.71
USP16-206ENST00000485067 COPB2P35606 906 aa10.61□□□□□ -0.71
USP16-206ENST00000485067 MAGEA8P43361 318 aa10.61□□□□□ -0.71
USP16-206ENST00000485067 EVCP57679 992 aa10.61□□□□□ -0.71
USP16-206ENST00000485067 FKBP4Q02790 459 aaKnown RBP eCLIP10.61□□□□□ -0.71
USP16-206ENST00000485067 ZSCAN25Q6NSZ9 544 aa10.61□□□□□ -0.71
USP16-206ENST00000485067 INTS5Q6P9B9 1019 aaKnown RBP10.61□□□□□ -0.71
USP16-206ENST00000485067 GIMAP6Q6P9H5 292 aa10.61□□□□□ -0.71
USP16-206ENST00000485067 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.61□□□□□ -0.71
USP16-206ENST00000485067 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.61□□□□□ -0.71
USP16-206ENST00000485067 ERICH4A6NGS2 130 aa10.61□□□□□ -0.71
USP16-206ENST00000485067 ERVV-1B6SEH8 477 aa10.61□□□□□ -0.71
USP16-206ENST00000485067 M0R2C6 588 aa10.61□□□□□ -0.71
USP16-206ENST00000485067 JAK2O60674 1132 aa10.61□□□□□ -0.71
USP16-206ENST00000485067 GSCP56915 257 aaPredicted RBP10.61□□□□□ -0.71
USP16-206ENST00000485067 PSMC1P62191 440 aaKnown RBP10.61□□□□□ -0.71
USP16-206ENST00000485067 IFT88Q13099 833 aa10.61□□□□□ -0.71
USP16-206ENST00000485067 TTF1Q15361 905 aaPredicted RBP10.61□□□□□ -0.71
USP16-206ENST00000485067 IMMTQ16891 758 aaKnown RBP10.61□□□□□ -0.71
USP16-206ENST00000485067 JAKMIP3Q5VZ66 844 aa10.61□□□□□ -0.71
USP16-206ENST00000485067 TTLL11Q8NHH1 800 aa10.61□□□□□ -0.71
USP16-206ENST00000485067 APPBP2Q92624 585 aa10.61□□□□□ -0.71
USP16-206ENST00000485067 RASSF4Q9H2L5 321 aa10.61□□□□□ -0.71
USP16-206ENST00000485067 RYDENQ9NUL5 291 aaKnown RBP10.61□□□□□ -0.71
USP16-206ENST00000485067 RIC1Q4ADV7 1423 aa10.61□□□□□ -0.71
USP16-206ENST00000485067 AKAP11Q9UKA4 1901 aa10.61□□□□□ -0.71
USP16-206ENST00000485067 DDX60Q8IY21 1712 aaKnown RBP10.6□□□□□ -0.71
USP16-206ENST00000485067 NWD2Q9ULI1 1742 aa10.6□□□□□ -0.71
USP16-206ENST00000485067 ITGA6P23229 1130 aa10.6□□□□□ -0.71
USP16-206ENST00000485067 ATP6V1AP38606 617 aa10.6□□□□□ -0.71
USP16-206ENST00000485067 KCNA1Q09470 495 aa10.6□□□□□ -0.71
USP16-206ENST00000485067 FAM182BQ5T319 152 aa10.6□□□□□ -0.71
USP16-206ENST00000485067 ZNF662Q6ZS27 426 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms