RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 TRIM35Q9UPQ4 493 aa16.99■□□□□ 0.31
RXRA-203ENST00000484822 SAMM50Q9Y512 469 aa16.99■□□□□ 0.31
RXRA-203ENST00000484822 TTC41PQ6P2S7 1318 aa16.99■□□□□ 0.31
RXRA-203ENST00000484822 IRS4O14654 1257 aaPredicted RBP16.99■□□□□ 0.31
RXRA-203ENST00000484822 ATP11AP98196 1134 aa16.99■□□□□ 0.31
RXRA-203ENST00000484822 ESR2Q92731 530 aa16.99■□□□□ 0.31
RXRA-203ENST00000484822 GDAP1L1Q96MZ0 367 aa16.99■□□□□ 0.31
RXRA-203ENST00000484822 ABCC3O15438 1527 aa16.98■□□□□ 0.31
RXRA-203ENST00000484822 TMEM94Q12767 1356 aa16.98■□□□□ 0.31
RXRA-203ENST00000484822 RNF123Q5XPI4 1314 aa16.98■□□□□ 0.31
RXRA-203ENST00000484822 KDM2BQ8NHM5 1336 aa16.98■□□□□ 0.31
RXRA-203ENST00000484822 GOLGA6BA6NDN3 693 aa16.98■□□□□ 0.31
RXRA-203ENST00000484822 ERCC6LQ2NKX8 1250 aa16.98■□□□□ 0.31
RXRA-203ENST00000484822 HEATR3Q7Z4Q2 680 aa16.98■□□□□ 0.31
RXRA-203ENST00000484822 STMN2Q93045 179 aa16.98■□□□□ 0.31
RXRA-203ENST00000484822 ZNF500O60304 480 aaPredicted RBP16.98■□□□□ 0.31
RXRA-203ENST00000484822 LONRF3Q496Y0 759 aa16.98■□□□□ 0.31
RXRA-203ENST00000484822 IFT74Q96LB3 600 aa16.98■□□□□ 0.31
RXRA-203ENST00000484822 FEZ2Q9UHY8 353 aaPredicted RBP16.98■□□□□ 0.31
RXRA-203ENST00000484822 ELP1O95163 1332 aa16.98■□□□□ 0.31
RXRA-203ENST00000484822 PLBD2Q8NHP8 589 aa16.98■□□□□ 0.31
RXRA-203ENST00000484822 CRNKL1Q9BZJ0 848 aaKnown RBP16.98■□□□□ 0.31
RXRA-203ENST00000484822 ARHGAP31Q2M1Z3 1444 aa16.98■□□□□ 0.31
RXRA-203ENST00000484822 MYCNP04198 464 aaPredicted RBP16.97■□□□□ 0.31
RXRA-203ENST00000484822 CALCOCO2Q13137 446 aa16.97■□□□□ 0.31
RXRA-203ENST00000484822 LMNTD2Q8IXW0 634 aa16.97■□□□□ 0.31
RXRA-203ENST00000484822 TTF2Q9UNY4 1162 aaKnown RBP16.97■□□□□ 0.31
RXRA-203ENST00000484822 FAM135BQ49AJ0 1406 aa16.97■□□□□ 0.31
RXRA-203ENST00000484822 PRDM15P57071 1507 aaPredicted RBP16.97■□□□□ 0.31
RXRA-203ENST00000484822 EEF2P13639 858 aaKnown RBP16.97■□□□□ 0.31
RXRA-203ENST00000484822 BICDL2A1A5D9 508 aa16.97■□□□□ 0.31
RXRA-203ENST00000484822 PPP1R7Q15435 360 aa16.97■□□□□ 0.31
RXRA-203ENST00000484822 SLC9C2Q5TAH2 1124 aa16.97■□□□□ 0.31
RXRA-203ENST00000484822 WDR66Q8TBY9 1149 aa16.97■□□□□ 0.31
RXRA-203ENST00000484822 NKIRAS1Q9NYS0 192 aa16.97■□□□□ 0.31
RXRA-203ENST00000484822 ZMYM4Q5VZL5 1548 aa16.97■□□□□ 0.31
RXRA-203ENST00000484822 ARHGAP25P42331 645 aa16.97■□□□□ 0.31
RXRA-203ENST00000484822 CCDC50Q8IVM0 306 aa16.97■□□□□ 0.31
RXRA-203ENST00000484822 BEGAINQ9BUH8 593 aa16.97■□□□□ 0.31
RXRA-203ENST00000484822 CNNM2Q9H8M5 875 aa16.97■□□□□ 0.31
RXRA-203ENST00000484822 ZNF215Q9UL58 517 aaPredicted RBP16.97■□□□□ 0.31
RXRA-203ENST00000484822 SLC4A4Q9Y6R1 1079 aa16.97■□□□□ 0.31
RXRA-203ENST00000484822 BAG6P46379 1132 aa16.96■□□□□ 0.31
RXRA-203ENST00000484822 TET3O43151 1660 aa16.96■□□□□ 0.31
RXRA-203ENST00000484822 IQUBQ8NA54 791 aa16.96■□□□□ 0.31
RXRA-203ENST00000484822 DDX17Q92841 729 aaKnown RBP16.96■□□□□ 0.31
RXRA-203ENST00000484822 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.96■□□□□ 0.31
RXRA-203ENST00000484822 MCM7P33993 719 aa16.96■□□□□ 0.31
RXRA-203ENST00000484822 SREK1Q8WXA9 508 aaKnown RBP16.96■□□□□ 0.31
RXRA-203ENST00000484822 MKRN1Q9UHC7 482 aaKnown RBP16.96■□□□□ 0.31
RXRA-203ENST00000484822 ATP6V0A2Q9Y487 856 aa16.96■□□□□ 0.31
RXRA-203ENST00000484822 KIF1BO60333 1816 aa16.96■□□□□ 0.31
RXRA-203ENST00000484822 ATP7BP35670 1465 aa16.96■□□□□ 0.31
RXRA-203ENST00000484822 PARP10Q53GL7 1025 aa16.96■□□□□ 0.31
RXRA-203ENST00000484822 TRIM7Q9C029 511 aa16.96■□□□□ 0.31
RXRA-203ENST00000484822 LGR6Q9HBX8 967 aa16.96■□□□□ 0.31
RXRA-203ENST00000484822 ARHGAP6O43182 974 aa16.95■□□□□ 0.3
RXRA-203ENST00000484822 ZNF804AQ7Z570 1209 aa16.95■□□□□ 0.3
RXRA-203ENST00000484822 TTC16Q8NEE8 873 aa16.95■□□□□ 0.3
RXRA-203ENST00000484822 MIPOL1Q8TD10 442 aa16.95■□□□□ 0.3
RXRA-203ENST00000484822 PAG1Q9NWQ8 432 aa16.95■□□□□ 0.3
RXRA-203ENST00000484822 ALDH3A1P30838 453 aa16.95■□□□□ 0.3
RXRA-203ENST00000484822 TBC1D8BQ0IIM8 1120 aa16.95■□□□□ 0.3
RXRA-203ENST00000484822 ERMNQ8TAM6 284 aa16.95■□□□□ 0.3
RXRA-203ENST00000484822 PSMB7Q99436 277 aa16.95■□□□□ 0.3
RXRA-203ENST00000484822 IQSEC3Q9UPP2 1182 aaPredicted RBP16.95■□□□□ 0.3
RXRA-203ENST00000484822 CDC42BPAQ5VT25 1732 aa16.95■□□□□ 0.3
RXRA-203ENST00000484822 PSMC4P43686 418 aa16.95■□□□□ 0.3
RXRA-203ENST00000484822 SND1Q7KZF4 910 aaKnown RBP eCLIP16.95■□□□□ 0.3
RXRA-203ENST00000484822 GAS2L3Q86XJ1 694 aa16.95■□□□□ 0.3
RXRA-203ENST00000484822 METTL22Q9BUU2 404 aaPredicted RBP16.95■□□□□ 0.3
RXRA-203ENST00000484822 TSGA10Q9BZW7 698 aa16.95■□□□□ 0.3
RXRA-203ENST00000484822 BAIAP2L1Q9UHR4 511 aa16.95■□□□□ 0.3
RXRA-203ENST00000484822 AATKQ6ZMQ8 1374 aa16.95■□□□□ 0.3
RXRA-203ENST00000484822 LRMPQ12912 555 aa16.95■□□□□ 0.3
RXRA-203ENST00000484822 LEO1Q8WVC0 666 aaPredicted RBP16.95■□□□□ 0.3
RXRA-203ENST00000484822 CFAP57Q96MR6 1250 aa16.95■□□□□ 0.3
RXRA-203ENST00000484822 KAT6BQ8WYB5 2073 aa16.95■□□□□ 0.3
RXRA-203ENST00000484822 SYNCQ9H7C4 482 aa16.94■□□□□ 0.3
RXRA-203ENST00000484822 ARID4AP29374 1257 aaPredicted RBP16.94■□□□□ 0.3
RXRA-203ENST00000484822 TUBB2AQ13885 445 aa16.94■□□□□ 0.3
RXRA-203ENST00000484822 ATL3Q6DD88 541 aa16.94■□□□□ 0.3
RXRA-203ENST00000484822 TUBB2BQ9BVA1 445 aa16.94■□□□□ 0.3
RXRA-203ENST00000484822 CTNND2Q9UQB3 1225 aa16.94■□□□□ 0.3
RXRA-203ENST00000484822 BICD1Q96G01 975 aa16.94■□□□□ 0.3
RXRA-203ENST00000484822 IMPACTQ9P2X3 320 aa16.94■□□□□ 0.3
RXRA-203ENST00000484822 MAPK8IP1Q9UQF2 711 aa16.94■□□□□ 0.3
RXRA-203ENST00000484822 BLMP54132 1417 aaPredicted RBP16.94■□□□□ 0.3
RXRA-203ENST00000484822 CYP7A1P22680 504 aa16.94■□□□□ 0.3
RXRA-203ENST00000484822 CCDC26Q8TAB7 109 aa16.94■□□□□ 0.3
RXRA-203ENST00000484822 TRIM31Q9BZY9 425 aa16.94■□□□□ 0.3
RXRA-203ENST00000484822 NEDD9Q14511 834 aa16.93■□□□□ 0.3
RXRA-203ENST00000484822 TRAPPC3LQ5T215 181 aa16.93■□□□□ 0.3
RXRA-203ENST00000484822 CYP26C1Q6V0L0 522 aa16.93■□□□□ 0.3
RXRA-203ENST00000484822 FERMT1Q9BQL6 677 aa16.93■□□□□ 0.3
RXRA-203ENST00000484822 GNPATO15228 680 aa16.93■□□□□ 0.3
RXRA-203ENST00000484822 TNNI2P48788 182 aa16.93■□□□□ 0.3
RXRA-203ENST00000484822 CACNA2D3Q8IZS8 1091 aa16.93■□□□□ 0.3
RXRA-203ENST00000484822 VWA3AA6NCI4 1184 aa16.93■□□□□ 0.3
RXRA-203ENST00000484822 ERVV-2B6SEH9 535 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms