RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 PUM3Q15397 648 aaKnown RBP19.12■□□□□ 0.65
HLA-DQB1-208ENST00000484729 GADL1Q6ZQY3 521 aa19.12■□□□□ 0.65
HLA-DQB1-208ENST00000484729 USP40Q9NVE5 1235 aa19.12■□□□□ 0.65
HLA-DQB1-208ENST00000484729 TAOK2Q9UL54 1235 aa19.12■□□□□ 0.65
HLA-DQB1-208ENST00000484729 ZHX2Q9Y6X8 837 aa19.12■□□□□ 0.65
HLA-DQB1-208ENST00000484729 SLURP2P0DP57 97 aa19.11■□□□□ 0.65
HLA-DQB1-208ENST00000484729 PRDX5P30044 214 aa19.11■□□□□ 0.65
HLA-DQB1-208ENST00000484729 WDR66Q8TBY9 1149 aa19.11■□□□□ 0.65
HLA-DQB1-208ENST00000484729 PAWRQ96IZ0 340 aaKnown RBP19.11■□□□□ 0.65
HLA-DQB1-208ENST00000484729 A0A0G2JLL6 359 aaPredicted RBP19.1■□□□□ 0.65
HLA-DQB1-208ENST00000484729 PHF20L1A8MW92 1017 aa19.1■□□□□ 0.65
HLA-DQB1-208ENST00000484729 EYA2O00167 538 aa19.1■□□□□ 0.65
HLA-DQB1-208ENST00000484729 TNPO2O14787 897 aaKnown RBP19.1■□□□□ 0.65
HLA-DQB1-208ENST00000484729 UBTFL1P0CB47 393 aaPredicted RBP19.1■□□□□ 0.65
HLA-DQB1-208ENST00000484729 FASTKD5Q7L8L6 764 aaKnown RBP19.1■□□□□ 0.65
HLA-DQB1-208ENST00000484729 PRRT2Q7Z6L0 340 aaPredicted RBP19.1■□□□□ 0.65
HLA-DQB1-208ENST00000484729 PXYLP1Q8TE99 480 aa19.1■□□□□ 0.65
HLA-DQB1-208ENST00000484729 DIS3LQ8TF46 1054 aaKnown RBP19.1■□□□□ 0.65
HLA-DQB1-208ENST00000484729 KIF16BQ96L93 1317 aa19.09■□□□□ 0.65
HLA-DQB1-208ENST00000484729 PTPRAP18433 802 aa19.09■□□□□ 0.65
HLA-DQB1-208ENST00000484729 RFX5P48382 616 aaPredicted RBP19.09■□□□□ 0.65
HLA-DQB1-208ENST00000484729 SCYL3Q8IZE3 742 aa19.09■□□□□ 0.65
HLA-DQB1-208ENST00000484729 PAK6Q9NQU5 681 aaPredicted RBP19.09■□□□□ 0.65
HLA-DQB1-208ENST00000484729 PICK1Q9NRD5 415 aa19.09■□□□□ 0.65
HLA-DQB1-208ENST00000484729 AFG3L2Q9Y4W6 797 aa19.09■□□□□ 0.65
HLA-DQB1-208ENST00000484729 ATRNL1Q5VV63 1379 aa19.08■□□□□ 0.65
HLA-DQB1-208ENST00000484729 ALPK3Q96L96 1907 aa19.08■□□□□ 0.65
HLA-DQB1-208ENST00000484729 SLC5A1P13866 664 aa19.08■□□□□ 0.64
HLA-DQB1-208ENST00000484729 IRF5Q13568 498 aa19.08■□□□□ 0.64
HLA-DQB1-208ENST00000484729 CRISPLD2Q9H0B8 497 aa19.08■□□□□ 0.64
HLA-DQB1-208ENST00000484729 SIL1Q9H173 461 aa19.08■□□□□ 0.64
HLA-DQB1-208ENST00000484729 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.08■□□□□ 0.64
HLA-DQB1-208ENST00000484729 ZMYND8Q9ULU4 1186 aaPredicted RBP19.08■□□□□ 0.64
HLA-DQB1-208ENST00000484729 LDHBP07195 334 aaKnown RBP19.07■□□□□ 0.64
HLA-DQB1-208ENST00000484729 CT47B1P0C2W7 299 aaPredicted RBP19.07■□□□□ 0.64
HLA-DQB1-208ENST00000484729 RGS3P49796 1198 aa19.07■□□□□ 0.64
HLA-DQB1-208ENST00000484729 Q7L0L9 218 aa19.07■□□□□ 0.64
HLA-DQB1-208ENST00000484729 SH3BP5LQ7L8J4 393 aa19.07■□□□□ 0.64
HLA-DQB1-208ENST00000484729 CCDC84Q86UT8 332 aaPredicted RBP19.07■□□□□ 0.64
HLA-DQB1-208ENST00000484729 C7orf61Q8IZ16 206 aa19.07■□□□□ 0.64
HLA-DQB1-208ENST00000484729 TRMT2AQ8IZ69 625 aaKnown RBP19.07■□□□□ 0.64
HLA-DQB1-208ENST00000484729 ANKRD13CQ8N6S4 541 aa19.07■□□□□ 0.64
HLA-DQB1-208ENST00000484729 SMCR8Q8TEV9 937 aaPredicted RBP19.07■□□□□ 0.64
HLA-DQB1-208ENST00000484729 LPIN2Q92539 896 aa19.07■□□□□ 0.64
HLA-DQB1-208ENST00000484729 API5Q9BZZ5 524 aaKnown RBP19.07■□□□□ 0.64
HLA-DQB1-208ENST00000484729 NOB1Q9ULX3 412 aaKnown RBP19.07■□□□□ 0.64
HLA-DQB1-208ENST00000484729 MYH13Q9UKX3 1938 aa19.07■□□□□ 0.64
HLA-DQB1-208ENST00000484729 TRIM75PA6NK02 468 aa19.06■□□□□ 0.64
HLA-DQB1-208ENST00000484729 NECAB2Q7Z6G3 386 aa19.06■□□□□ 0.64
HLA-DQB1-208ENST00000484729 GDF15Q99988 308 aa19.06■□□□□ 0.64
HLA-DQB1-208ENST00000484729 ATG9AQ7Z3C6 839 aa19.05■□□□□ 0.64
HLA-DQB1-208ENST00000484729 ZSCAN29Q8IWY8 852 aaPredicted RBP19.05■□□□□ 0.64
HLA-DQB1-208ENST00000484729 DEFB123Q8N688 67 aa19.05■□□□□ 0.64
HLA-DQB1-208ENST00000484729 COA7Q96BR5 231 aa19.05■□□□□ 0.64
HLA-DQB1-208ENST00000484729 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.05■□□□□ 0.64
HLA-DQB1-208ENST00000484729 SLC45A1Q9Y2W3 748 aa19.05■□□□□ 0.64
HLA-DQB1-208ENST00000484729 SYN1P17600 705 aa19.04■□□□□ 0.64
HLA-DQB1-208ENST00000484729 MNX1P50219 401 aaPredicted RBP19.04■□□□□ 0.64
HLA-DQB1-208ENST00000484729 LRRFIP2Q9Y608 721 aaKnown RBP19.04■□□□□ 0.64
HLA-DQB1-208ENST00000484729 DOCK2Q92608 1830 aa19.04■□□□□ 0.64
HLA-DQB1-208ENST00000484729 DOCK3Q8IZD9 2030 aa19.03■□□□□ 0.64
HLA-DQB1-208ENST00000484729 DDTLA6NHG4 134 aaPredicted RBP19.03■□□□□ 0.64
HLA-DQB1-208ENST00000484729 CIAO1O76071 339 aa19.03■□□□□ 0.64
HLA-DQB1-208ENST00000484729 BMP8BP34820 402 aa19.03■□□□□ 0.64
HLA-DQB1-208ENST00000484729 ATP2B3Q16720 1220 aa19.03■□□□□ 0.64
HLA-DQB1-208ENST00000484729 TREML2Q5T2D2 321 aa19.03■□□□□ 0.64
HLA-DQB1-208ENST00000484729 CEP126Q9P2H0 1117 aa19.03■□□□□ 0.64
HLA-DQB1-208ENST00000484729 FBXO3Q9UK99 471 aa19.03■□□□□ 0.64
HLA-DQB1-208ENST00000484729 HDAC5Q9UQL6 1122 aa19.03■□□□□ 0.64
HLA-DQB1-208ENST00000484729 PTPRFP10586 1907 aa19.02■□□□□ 0.64
HLA-DQB1-208ENST00000484729 CCER2I3L3R5 266 aa19.02■□□□□ 0.64
HLA-DQB1-208ENST00000484729 ENTPD3O75355 529 aa19.02■□□□□ 0.64
HLA-DQB1-208ENST00000484729 CAPN2P17655 700 aa19.02■□□□□ 0.64
HLA-DQB1-208ENST00000484729 TRIM32Q13049 653 aa19.02■□□□□ 0.64
HLA-DQB1-208ENST00000484729 IDI2Q9BXS1 227 aa19.02■□□□□ 0.64
HLA-DQB1-208ENST00000484729 DDX4Q9NQI0 724 aaKnown RBP19.02■□□□□ 0.64
HLA-DQB1-208ENST00000484729 AGTPBP1Q9UPW5 1226 aa19.02■□□□□ 0.64
HLA-DQB1-208ENST00000484729 CTNND1O60716 968 aaKnown RBP19.01■□□□□ 0.63
HLA-DQB1-208ENST00000484729 PHKA1P46020 1223 aa19.01■□□□□ 0.63
HLA-DQB1-208ENST00000484729 MAP3K10Q02779 954 aa19.01■□□□□ 0.63
HLA-DQB1-208ENST00000484729 PICALMQ13492 652 aa19.01■□□□□ 0.63
HLA-DQB1-208ENST00000484729 MEIS3Q99687 375 aa19.01■□□□□ 0.63
HLA-DQB1-208ENST00000484729 GNL3LQ9NVN8 582 aaKnown RBP19.01■□□□□ 0.63
HLA-DQB1-208ENST00000484729 PA2G4Q9UQ80 394 aaKnown RBP19.01■□□□□ 0.63
HLA-DQB1-208ENST00000484729 PHIPQ8WWQ0 1821 aa19.01■□□□□ 0.63
HLA-DQB1-208ENST00000484729 IL15P40933 162 aaPredicted RBP19■□□□□ 0.63
HLA-DQB1-208ENST00000484729 MAGEA10P43363 369 aaPredicted RBP19■□□□□ 0.63
HLA-DQB1-208ENST00000484729 RARSP54136 660 aaKnown RBP19■□□□□ 0.63
HLA-DQB1-208ENST00000484729 RFX7Q2KHR2 1363 aa19■□□□□ 0.63
HLA-DQB1-208ENST00000484729 DOCK1Q14185 1865 aa19■□□□□ 0.63
HLA-DQB1-208ENST00000484729 SALL1Q9NSC2 1324 aa19■□□□□ 0.63
HLA-DQB1-208ENST00000484729 FAM196BA6NMK8 535 aa18.99■□□□□ 0.63
HLA-DQB1-208ENST00000484729 HMGCRP04035 888 aa18.99■□□□□ 0.63
HLA-DQB1-208ENST00000484729 FAM110CQ1W6H9 321 aa18.99■□□□□ 0.63
HLA-DQB1-208ENST00000484729 GPR153Q6NV75 609 aa18.99■□□□□ 0.63
HLA-DQB1-208ENST00000484729 ANKLE1Q8NAG6 615 aa18.99■□□□□ 0.63
HLA-DQB1-208ENST00000484729 NBPF3Q9H094 633 aa18.99■□□□□ 0.63
HLA-DQB1-208ENST00000484729 DENND2AQ9ULE3 1009 aa18.99■□□□□ 0.63
HLA-DQB1-208ENST00000484729 GAKO14976 1311 aa18.99■□□□□ 0.63
HLA-DQB1-208ENST00000484729 MYH2Q9UKX2 1941 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms