RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.73■■□□□ 1.23
LIMS2-215ENST00000484252 SLC12A7Q9Y666 1083 aa22.73■■□□□ 1.23
LIMS2-215ENST00000484252 ELOA2Q8IYF1 753 aaPredicted RBP22.72■■□□□ 1.23
LIMS2-215ENST00000484252 NKX2-3Q8TAU0 364 aa22.72■■□□□ 1.23
LIMS2-215ENST00000484252 ZNF592Q92610 1267 aa22.72■■□□□ 1.23
LIMS2-215ENST00000484252 FAM217BQ9NTX9 383 aaPredicted RBP22.72■■□□□ 1.23
LIMS2-215ENST00000484252 UBN2Q6ZU65 1347 aa22.72■■□□□ 1.23
LIMS2-215ENST00000484252 FMNL1O95466 1100 aaPredicted RBP22.72■■□□□ 1.23
LIMS2-215ENST00000484252 GNAT2P19087 354 aa22.72■■□□□ 1.23
LIMS2-215ENST00000484252 RXRAP19793 462 aa22.72■■□□□ 1.23
LIMS2-215ENST00000484252 TMC6Q7Z403 805 aa22.72■■□□□ 1.23
LIMS2-215ENST00000484252 FEZ1Q99689 392 aa22.72■■□□□ 1.23
LIMS2-215ENST00000484252 MTA3Q9BTC8 594 aa22.72■■□□□ 1.23
LIMS2-215ENST00000484252 SENP2Q9HC62 589 aa22.72■■□□□ 1.23
LIMS2-215ENST00000484252 CGNQ9P2M7 1197 aaKnown RBP22.72■■□□□ 1.23
LIMS2-215ENST00000484252 DOCK2Q92608 1830 aa22.71■■□□□ 1.23
LIMS2-215ENST00000484252 IFIT3O14879 490 aaKnown RBP22.71■■□□□ 1.23
LIMS2-215ENST00000484252 RANBP6O60518 1105 aaKnown RBP22.71■■□□□ 1.23
LIMS2-215ENST00000484252 TUBB4AP04350 444 aa22.71■■□□□ 1.23
LIMS2-215ENST00000484252 SFPQP23246 707 aaKnown RBP eCLIP22.71■■□□□ 1.23
LIMS2-215ENST00000484252 KIF18AQ8NI77 898 aa22.71■■□□□ 1.23
LIMS2-215ENST00000484252 ECM29Q5VYK3 1845 aa22.71■■□□□ 1.23
LIMS2-215ENST00000484252 MYO5AQ9Y4I1 1855 aaKnown RBP22.71■■□□□ 1.23
LIMS2-215ENST00000484252 PSDA5PKW4 1024 aaPredicted RBP22.7■■□□□ 1.23
LIMS2-215ENST00000484252 CBFA2T2O43439 604 aa22.7■■□□□ 1.23
LIMS2-215ENST00000484252 MBD4O95243 580 aa22.7■■□□□ 1.23
LIMS2-215ENST00000484252 IFNAR1P17181 557 aa22.7■■□□□ 1.23
LIMS2-215ENST00000484252 AKNAD1Q5T1N1 836 aa22.7■■□□□ 1.23
LIMS2-215ENST00000484252 MAGEB6Q8N7X4 407 aa22.7■■□□□ 1.23
LIMS2-215ENST00000484252 EPB41L4AQ9HCS5 686 aaPredicted RBP22.7■■□□□ 1.23
LIMS2-215ENST00000484252 ZSWIM5Q9P217 1185 aa22.7■■□□□ 1.23
LIMS2-215ENST00000484252 FANCCQ00597 558 aa22.7■■□□□ 1.22
LIMS2-215ENST00000484252 NACAP1Q9BZK3 213 aa22.7■■□□□ 1.22
LIMS2-215ENST00000484252 BTG4Q9NY30 223 aa22.7■■□□□ 1.22
LIMS2-215ENST00000484252 MYL5Q02045 173 aa22.69■■□□□ 1.22
LIMS2-215ENST00000484252 ARMCX5Q6P1M9 558 aa22.69■■□□□ 1.22
LIMS2-215ENST00000484252 TRMT1Q9NXH9 659 aaKnown RBP22.69■■□□□ 1.22
LIMS2-215ENST00000484252 PNPLA7Q6ZV29 1317 aa22.69■■□□□ 1.22
LIMS2-215ENST00000484252 RASGRF1Q13972 1273 aa22.69■■□□□ 1.22
LIMS2-215ENST00000484252 SART3Q15020 963 aaKnown RBP22.69■■□□□ 1.22
LIMS2-215ENST00000484252 SAFBQ15424 915 aaKnown RBP eCLIP22.69■■□□□ 1.22
LIMS2-215ENST00000484252 MFSD6Q6ZSS7 791 aa22.69■■□□□ 1.22
LIMS2-215ENST00000484252 STAG1Q8WVM7 1258 aa22.69■■□□□ 1.22
LIMS2-215ENST00000484252 SLC26A6Q9BXS9 759 aa22.69■■□□□ 1.22
LIMS2-215ENST00000484252 HOOK1Q9UJC3 728 aaKnown RBP22.69■■□□□ 1.22
LIMS2-215ENST00000484252 RCAN1P53805 252 aa22.68■■□□□ 1.22
LIMS2-215ENST00000484252 OLFM4Q6UX06 510 aa22.68■■□□□ 1.22
LIMS2-215ENST00000484252 PRDM10Q9NQV6 1147 aa22.68■■□□□ 1.22
LIMS2-215ENST00000484252 GSG1L2A8MUP6 293 aa22.67■■□□□ 1.22
LIMS2-215ENST00000484252 CCP110O43303 1012 aa22.67■■□□□ 1.22
LIMS2-215ENST00000484252 NOSTRINQ8IVI9 506 aa22.67■■□□□ 1.22
LIMS2-215ENST00000484252 TRIM22Q8IYM9 498 aa22.67■■□□□ 1.22
LIMS2-215ENST00000484252 TMTC2Q8N394 836 aa22.67■■□□□ 1.22
LIMS2-215ENST00000484252 KRI1Q8N9T8 703 aaKnown RBP22.67■■□□□ 1.22
LIMS2-215ENST00000484252 HELBQ8NG08 1087 aaPredicted RBP22.67■■□□□ 1.22
LIMS2-215ENST00000484252 MPHOSPH8Q99549 860 aa22.67■■□□□ 1.22
LIMS2-215ENST00000484252 ZHX1Q9UKY1 873 aaPredicted RBP22.67■■□□□ 1.22
LIMS2-215ENST00000484252 KCNH3Q9ULD8 1083 aa22.67■■□□□ 1.22
LIMS2-215ENST00000484252 LMOD1P29536 600 aaPredicted RBP22.67■■□□□ 1.22
LIMS2-215ENST00000484252 CTDSPL2Q05D32 466 aa22.67■■□□□ 1.22
LIMS2-215ENST00000484252 KRBA2Q6ZNG9 492 aa22.67■■□□□ 1.22
LIMS2-215ENST00000484252 ARMT1Q9H993 441 aa22.67■■□□□ 1.22
LIMS2-215ENST00000484252 MMP1P03956 469 aa22.66■■□□□ 1.22
LIMS2-215ENST00000484252 E4F1Q66K89 784 aaPredicted RBP22.66■■□□□ 1.22
LIMS2-215ENST00000484252 CNNM3Q8NE01 707 aa22.66■■□□□ 1.22
LIMS2-215ENST00000484252 ERO1AQ96HE7 468 aa22.66■■□□□ 1.22
LIMS2-215ENST00000484252 NOL10Q9BSC4 688 aaKnown RBP22.66■■□□□ 1.22
LIMS2-215ENST00000484252 MYL10Q9BUA6 226 aa22.66■■□□□ 1.22
LIMS2-215ENST00000484252 HSD3B7Q9H2F3 369 aa22.66■■□□□ 1.22
LIMS2-215ENST00000484252 CHD4Q14839 1912 aa22.66■■□□□ 1.22
LIMS2-215ENST00000484252 PLCH1Q4KWH8 1693 aa22.66■■□□□ 1.22
LIMS2-215ENST00000484252 CCDC196A0A1B0GTZ2 297 aa22.66■■□□□ 1.22
LIMS2-215ENST00000484252 FOXP1Q9H334 677 aaPredicted RBP22.66■■□□□ 1.22
LIMS2-215ENST00000484252 CBX1P83916 185 aa22.65■■□□□ 1.22
LIMS2-215ENST00000484252 PNOCQ13519 176 aa22.65■■□□□ 1.22
LIMS2-215ENST00000484252 RTN1Q16799 776 aa22.65■■□□□ 1.22
LIMS2-215ENST00000484252 METTL16Q86W50 562 aaKnown RBP22.65■■□□□ 1.22
LIMS2-215ENST00000484252 PPP1R13BQ96KQ4 1090 aa22.65■■□□□ 1.22
LIMS2-215ENST00000484252 CLIC6Q96NY7 704 aa22.65■■□□□ 1.22
LIMS2-215ENST00000484252 RNF41Q9H4P4 317 aaPredicted RBP22.65■■□□□ 1.22
LIMS2-215ENST00000484252 RTL9Q8NET4 1388 aa22.65■■□□□ 1.22
LIMS2-215ENST00000484252 COL14A1Q05707 1796 aaKnown RBP22.65■■□□□ 1.22
LIMS2-215ENST00000484252 ERICH2A1L162 156 aa22.64■■□□□ 1.22
LIMS2-215ENST00000484252 EXOC5O00471 708 aa22.64■■□□□ 1.22
LIMS2-215ENST00000484252 TDO2P48775 406 aa22.64■■□□□ 1.22
LIMS2-215ENST00000484252 UBASH3AP57075 661 aa22.64■■□□□ 1.22
LIMS2-215ENST00000484252 WTAPQ15007 396 aa22.64■■□□□ 1.22
LIMS2-215ENST00000484252 RILPL1Q5EBL4 403 aa22.64■■□□□ 1.22
LIMS2-215ENST00000484252 UTP14AQ9BVJ6 771 aaKnown RBP22.64■■□□□ 1.22
LIMS2-215ENST00000484252 INCENPQ9NQS7 918 aa22.64■■□□□ 1.22
LIMS2-215ENST00000484252 EIF5P55010 431 aaKnown RBP22.64■■□□□ 1.21
LIMS2-215ENST00000484252 LONRF3Q496Y0 759 aa22.64■■□□□ 1.21
LIMS2-215ENST00000484252 SUSD4Q5VX71 490 aa22.64■■□□□ 1.21
LIMS2-215ENST00000484252 SLC4A4Q9Y6R1 1079 aa22.64■■□□□ 1.21
LIMS2-215ENST00000484252 SLIT2O94813 1529 aa22.63■■□□□ 1.21
LIMS2-215ENST00000484252 DEXIO95424 95 aa22.63■■□□□ 1.21
LIMS2-215ENST00000484252 SERPINC1P01008 464 aa22.63■■□□□ 1.21
LIMS2-215ENST00000484252 CCDC152Q4G0S7 254 aa22.63■■□□□ 1.21
LIMS2-215ENST00000484252 PARP10Q53GL7 1025 aa22.63■■□□□ 1.21
LIMS2-215ENST00000484252 ISM2Q6H9L7 571 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms