RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 CYP11A1P05108 521 aa6.27□□□□□ -1.41
PTCD3-214ENST00000483925 ADMP35318 185 aa6.27□□□□□ -1.41
PTCD3-214ENST00000483925 ARID5AQ03989 594 aa6.27□□□□□ -1.41
PTCD3-214ENST00000483925 PCDH1Q08174 1060 aa6.27□□□□□ -1.41
PTCD3-214ENST00000483925 VSIG10LQ86VR7 867 aa6.27□□□□□ -1.41
PTCD3-214ENST00000483925 VPS37DQ86XT2 251 aa6.27□□□□□ -1.41
PTCD3-214ENST00000483925 GJD3Q8N144 294 aa6.27□□□□□ -1.41
PTCD3-214ENST00000483925 PMFBP1Q8TBY8 1022 aa6.27□□□□□ -1.41
PTCD3-214ENST00000483925 NRSN2Q9GZP1 204 aa6.27□□□□□ -1.41
PTCD3-214ENST00000483925 CLEC4MQ9H2X3 399 aaPredicted RBP6.27□□□□□ -1.41
PTCD3-214ENST00000483925 ZSWIM4Q9H7M6 989 aa6.27□□□□□ -1.41
PTCD3-214ENST00000483925 ZFYVE1Q9HBF4 777 aa6.27□□□□□ -1.41
PTCD3-214ENST00000483925 CCDC87Q9NVE4 849 aa6.27□□□□□ -1.41
PTCD3-214ENST00000483925 BSDC1Q9NW68 430 aaPredicted RBP6.27□□□□□ -1.41
PTCD3-214ENST00000483925 hCG_2014768A0A024R1R8 64 aa6.26□□□□□ -1.41
PTCD3-214ENST00000483925 POLR3DP05423 398 aaPredicted RBP6.26□□□□□ -1.41
PTCD3-214ENST00000483925 ADH5P11766 374 aa6.26□□□□□ -1.41
PTCD3-214ENST00000483925 MAOBP27338 520 aa6.26□□□□□ -1.41
PTCD3-214ENST00000483925 PDE3BQ13370 1112 aa6.26□□□□□ -1.41
PTCD3-214ENST00000483925 MAP7Q14244 749 aa6.26□□□□□ -1.41
PTCD3-214ENST00000483925 DSC3Q14574 896 aa6.26□□□□□ -1.41
PTCD3-214ENST00000483925 ZNF423Q2M1K9 1284 aa6.26□□□□□ -1.41
PTCD3-214ENST00000483925 HP1BP3Q5SSJ5 553 aaPredicted RBP6.26□□□□□ -1.41
PTCD3-214ENST00000483925 DUSP27Q5VZP5 1158 aa6.26□□□□□ -1.41
PTCD3-214ENST00000483925 CCNJLQ8IV13 435 aa6.26□□□□□ -1.41
PTCD3-214ENST00000483925 TP53INP2Q8IXH6 220 aa6.26□□□□□ -1.41
PTCD3-214ENST00000483925 FAM161BQ96MY7 647 aa6.26□□□□□ -1.41
PTCD3-214ENST00000483925 ACBD3Q9H3P7 528 aa6.26□□□□□ -1.41
PTCD3-214ENST00000483925 TBX22Q9Y458 520 aa6.26□□□□□ -1.41
PTCD3-214ENST00000483925 ARID1BQ8NFD5 2236 aaPredicted RBP6.25□□□□□ -1.41
PTCD3-214ENST00000483925 A0A1W2PP55 124 aa6.25□□□□□ -1.41
PTCD3-214ENST00000483925 FAM170BA6NMN3 283 aa6.25□□□□□ -1.41
PTCD3-214ENST00000483925 RAB11FIP3O75154 756 aa6.25□□□□□ -1.41
PTCD3-214ENST00000483925 NFICP08651 508 aa6.25□□□□□ -1.41
PTCD3-214ENST00000483925 POU4F3Q15319 338 aa6.25□□□□□ -1.41
PTCD3-214ENST00000483925 PTPROQ16827 1216 aa6.25□□□□□ -1.41
PTCD3-214ENST00000483925 GALNT12Q8IXK2 581 aa6.25□□□□□ -1.41
PTCD3-214ENST00000483925 ZCRB1Q8TBF4 217 aaKnown RBP6.25□□□□□ -1.41
PTCD3-214ENST00000483925 BRINP2Q9C0B6 783 aa6.25□□□□□ -1.41
PTCD3-214ENST00000483925 LIN7BQ9HAP6 207 aa6.25□□□□□ -1.41
PTCD3-214ENST00000483925 RAD18Q9NS91 495 aa6.25□□□□□ -1.41
PTCD3-214ENST00000483925 INPP5FQ9Y2H2 1132 aa6.25□□□□□ -1.41
PTCD3-214ENST00000483925 ACTL7BQ9Y614 415 aa6.25□□□□□ -1.41
PTCD3-214ENST00000483925 GRIA4P48058 902 aa6.24□□□□□ -1.41
PTCD3-214ENST00000483925 ANAPC15P60006 121 aa6.24□□□□□ -1.41
PTCD3-214ENST00000483925 CYP27A1Q02318 531 aa6.24□□□□□ -1.41
PTCD3-214ENST00000483925 SPRED3Q2MJR0 410 aa6.24□□□□□ -1.41
PTCD3-214ENST00000483925 RNF187Q5TA31 235 aaPredicted RBP6.24□□□□□ -1.41
PTCD3-214ENST00000483925 CCDC181Q5TID7 509 aa6.24□□□□□ -1.41
PTCD3-214ENST00000483925 ALG1LQ6GMV1 187 aa6.24□□□□□ -1.41
PTCD3-214ENST00000483925 NFXL1Q6ZNB6 911 aa6.24□□□□□ -1.41
PTCD3-214ENST00000483925 CBLL1Q75N03 491 aa6.24□□□□□ -1.41
PTCD3-214ENST00000483925 DYMQ7RTS9 669 aa6.24□□□□□ -1.41
PTCD3-214ENST00000483925 ZNF654Q8IZM8 581 aa6.24□□□□□ -1.41
PTCD3-214ENST00000483925 DDX54Q8TDD1 881 aaKnown RBP6.24□□□□□ -1.41
PTCD3-214ENST00000483925 GATA6Q92908 595 aa6.24□□□□□ -1.41
PTCD3-214ENST00000483925 KCNB2Q92953 911 aa6.24□□□□□ -1.41
PTCD3-214ENST00000483925 TCF12Q99081 682 aa6.24□□□□□ -1.41
PTCD3-214ENST00000483925 OSBPL2Q9H1P3 480 aa6.24□□□□□ -1.41
PTCD3-214ENST00000483925 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.23□□□□□ -1.41
PTCD3-214ENST00000483925 STK10O94804 968 aaKnown RBP6.23□□□□□ -1.41
PTCD3-214ENST00000483925 RAB6AP20340 208 aa6.23□□□□□ -1.41
PTCD3-214ENST00000483925 HSD3B2P26439 372 aa6.23□□□□□ -1.41
PTCD3-214ENST00000483925 FZD5Q13467 585 aa6.23□□□□□ -1.41
PTCD3-214ENST00000483925 AKAP4Q5JQC9 854 aa6.23□□□□□ -1.41
PTCD3-214ENST00000483925 AGBL5Q8NDL9 886 aa6.23□□□□□ -1.41
PTCD3-214ENST00000483925 ALKBH8Q96BT7 664 aaKnown RBP6.23□□□□□ -1.41
PTCD3-214ENST00000483925 ASIC4Q96FT7 647 aa6.23□□□□□ -1.41
PTCD3-214ENST00000483925 SEMA6CQ9H3T2 930 aa6.23□□□□□ -1.41
PTCD3-214ENST00000483925 PLEKHD1A6NEE1 506 aa6.22□□□□□ -1.41
PTCD3-214ENST00000483925 NEFLP07196 543 aa6.22□□□□□ -1.41
PTCD3-214ENST00000483925 CTSBP07858 339 aa6.22□□□□□ -1.41
PTCD3-214ENST00000483925 TNNI2P48788 182 aa6.22□□□□□ -1.41
PTCD3-214ENST00000483925 NFE2L2Q16236 605 aa6.22□□□□□ -1.41
PTCD3-214ENST00000483925 ZNF746Q6NUN9 644 aaPredicted RBP6.22□□□□□ -1.41
PTCD3-214ENST00000483925 FLCNQ8NFG4 579 aa6.22□□□□□ -1.41
PTCD3-214ENST00000483925 FRMD6Q96NE9 622 aa6.22□□□□□ -1.41
PTCD3-214ENST00000483925 PSMD1Q99460 953 aa6.22□□□□□ -1.41
PTCD3-214ENST00000483925 CORO1BQ9BR76 489 aa6.22□□□□□ -1.41
PTCD3-214ENST00000483925 PIF1Q9H611 641 aa6.22□□□□□ -1.41
PTCD3-214ENST00000483925 ACSS3Q9H6R3 686 aa6.22□□□□□ -1.41
PTCD3-214ENST00000483925 LRRC4CQ9HCJ2 640 aa6.22□□□□□ -1.41
PTCD3-214ENST00000483925 ZC3H7BQ9UGR2 993 aaKnown RBP6.22□□□□□ -1.41
PTCD3-214ENST00000483925 NOP58Q9Y2X3 529 aaKnown RBP6.22□□□□□ -1.41
PTCD3-214ENST00000483925 JUNBP17275 347 aaPredicted RBP6.21□□□□□ -1.42
PTCD3-214ENST00000483925 GNA15P30679 374 aa6.21□□□□□ -1.42
PTCD3-214ENST00000483925 ASPAP45381 313 aa6.21□□□□□ -1.42
PTCD3-214ENST00000483925 KIAA0319Q5VV43 1072 aa6.21□□□□□ -1.42
PTCD3-214ENST00000483925 ZNF765Q7L2R6 523 aa6.21□□□□□ -1.42
PTCD3-214ENST00000483925 FAM129BQ96TA1 746 aa6.21□□□□□ -1.42
PTCD3-214ENST00000483925 FAM105AQ9NUU6 356 aa6.21□□□□□ -1.42
PTCD3-214ENST00000483925 B3GALT4O96024 378 aa6.2□□□□□ -1.42
PTCD3-214ENST00000483925 TCEAL1Q15170 157 aa6.2□□□□□ -1.42
PTCD3-214ENST00000483925 OGFOD2Q6N063 350 aa6.2□□□□□ -1.42
PTCD3-214ENST00000483925 NLGN1Q8N2Q7 840 aa6.2□□□□□ -1.42
PTCD3-214ENST00000483925 CRELD1Q96HD1 420 aa6.2□□□□□ -1.42
PTCD3-214ENST00000483925 MRFAP1L1Q96HT8 127 aa6.2□□□□□ -1.42
PTCD3-214ENST00000483925 GPATCH3Q96I76 525 aa6.2□□□□□ -1.42
PTCD3-214ENST00000483925 TRIM56Q9BRZ2 755 aaKnown RBP6.2□□□□□ -1.42
PTCD3-214ENST00000483925 GSX1Q9H4S2 264 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms