RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 RABL6Q3YEC7 729 aaPredicted RBP13.69□□□□□ -0.22
SMARCC1-205ENST00000483847 GADL1Q6ZQY3 521 aa13.69□□□□□ -0.22
SMARCC1-205ENST00000483847 PRRT2Q7Z6L0 340 aaPredicted RBP13.69□□□□□ -0.22
SMARCC1-205ENST00000483847 PXYLP1Q8TE99 480 aa13.69□□□□□ -0.22
SMARCC1-205ENST00000483847 TAOK2Q9UL54 1235 aa13.69□□□□□ -0.22
SMARCC1-205ENST00000483847 ZMYND8Q9ULU4 1186 aaPredicted RBP13.69□□□□□ -0.22
SMARCC1-205ENST00000483847 SALL2Q9Y467 1007 aaPredicted RBP13.69□□□□□ -0.22
SMARCC1-205ENST00000483847 DOCK2Q92608 1830 aa13.69□□□□□ -0.22
SMARCC1-205ENST00000483847 UTYO14607 1347 aa13.68□□□□□ -0.22
SMARCC1-205ENST00000483847 DOCK3Q8IZD9 2030 aa13.68□□□□□ -0.22
SMARCC1-205ENST00000483847 C7orf61Q8IZ16 206 aa13.68□□□□□ -0.22
SMARCC1-205ENST00000483847 DEFB123Q8N688 67 aa13.68□□□□□ -0.22
SMARCC1-205ENST00000483847 AFG3L2Q9Y4W6 797 aa13.68□□□□□ -0.22
SMARCC1-205ENST00000483847 PHIPQ8WWQ0 1821 aa13.67□□□□□ -0.22
SMARCC1-205ENST00000483847 PTPRAP18433 802 aa13.67□□□□□ -0.22
SMARCC1-205ENST00000483847 PRDX5P30044 214 aa13.67□□□□□ -0.22
SMARCC1-205ENST00000483847 BMP8BP34820 402 aa13.67□□□□□ -0.22
SMARCC1-205ENST00000483847 PUM3Q15397 648 aaKnown RBP13.67□□□□□ -0.22
SMARCC1-205ENST00000483847 FASTKD5Q7L8L6 764 aaKnown RBP13.67□□□□□ -0.22
SMARCC1-205ENST00000483847 NECAB2Q7Z6G3 386 aa13.67□□□□□ -0.22
SMARCC1-205ENST00000483847 SCYL3Q8IZE3 742 aa13.67□□□□□ -0.22
SMARCC1-205ENST00000483847 WDR66Q8TBY9 1149 aa13.67□□□□□ -0.22
SMARCC1-205ENST00000483847 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.67□□□□□ -0.22
SMARCC1-205ENST00000483847 USP40Q9NVE5 1235 aa13.67□□□□□ -0.22
SMARCC1-205ENST00000483847 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.67□□□□□ -0.22
SMARCC1-205ENST00000483847 KIF16BQ96L93 1317 aa13.66□□□□□ -0.22
SMARCC1-205ENST00000483847 IFIT1P09914 478 aaKnown RBP13.66□□□□□ -0.22
SMARCC1-205ENST00000483847 SYN1P17600 705 aa13.66□□□□□ -0.22
SMARCC1-205ENST00000483847 SH3BP5LQ7L8J4 393 aa13.66□□□□□ -0.22
SMARCC1-205ENST00000483847 CCDC84Q86UT8 332 aaPredicted RBP13.66□□□□□ -0.22
SMARCC1-205ENST00000483847 WDR63Q8IWG1 891 aa13.66□□□□□ -0.22
SMARCC1-205ENST00000483847 SMCR8Q8TEV9 937 aaPredicted RBP13.66□□□□□ -0.22
SMARCC1-205ENST00000483847 PICK1Q9NRD5 415 aa13.66□□□□□ -0.22
SMARCC1-205ENST00000483847 DOCK1Q14185 1865 aa13.65□□□□□ -0.22
SMARCC1-205ENST00000483847 DDX60LQ5H9U9 1706 aaKnown RBP13.65□□□□□ -0.22
SMARCC1-205ENST00000483847 TRIM75PA6NK02 468 aa13.65□□□□□ -0.22
SMARCC1-205ENST00000483847 RGS3P49796 1198 aa13.65□□□□□ -0.22
SMARCC1-205ENST00000483847 TRIM32Q13049 653 aa13.65□□□□□ -0.22
SMARCC1-205ENST00000483847 NCBP3Q53F19 620 aaKnown RBP13.65□□□□□ -0.22
SMARCC1-205ENST00000483847 GPR153Q6NV75 609 aa13.65□□□□□ -0.22
SMARCC1-205ENST00000483847 ANKRD13CQ8N6S4 541 aa13.65□□□□□ -0.22
SMARCC1-205ENST00000483847 STXBP5LQ9Y2K9 1186 aa13.65□□□□□ -0.22
SMARCC1-205ENST00000483847 SLC45A1Q9Y2W3 748 aa13.65□□□□□ -0.22
SMARCC1-205ENST00000483847 RFX7Q2KHR2 1363 aa13.64□□□□□ -0.23
SMARCC1-205ENST00000483847 CAPN2P17655 700 aa13.64□□□□□ -0.23
SMARCC1-205ENST00000483847 ZEB1P37275 1124 aaPredicted RBP13.64□□□□□ -0.23
SMARCC1-205ENST00000483847 MAGEA10P43363 369 aaPredicted RBP13.64□□□□□ -0.23
SMARCC1-205ENST00000483847 TREML2Q5T2D2 321 aa13.64□□□□□ -0.23
SMARCC1-205ENST00000483847 COA7Q96BR5 231 aa13.64□□□□□ -0.23
SMARCC1-205ENST00000483847 MTMR10Q9NXD2 777 aa13.64□□□□□ -0.23
SMARCC1-205ENST00000483847 DDTLA6NHG4 134 aaPredicted RBP13.63□□□□□ -0.23
SMARCC1-205ENST00000483847 LDHBP07195 334 aaKnown RBP13.63□□□□□ -0.23
SMARCC1-205ENST00000483847 SLC5A1P13866 664 aa13.63□□□□□ -0.23
SMARCC1-205ENST00000483847 LRIT3Q3SXY7 679 aa13.63□□□□□ -0.23
SMARCC1-205ENST00000483847 ANKLE1Q8NAG6 615 aa13.63□□□□□ -0.23
SMARCC1-205ENST00000483847 COL25A1Q9BXS0 654 aaPredicted RBP13.63□□□□□ -0.23
SMARCC1-205ENST00000483847 AGTPBP1Q9UPW5 1226 aa13.63□□□□□ -0.23
SMARCC1-205ENST00000483847 LRRFIP2Q9Y608 721 aaKnown RBP13.63□□□□□ -0.23
SMARCC1-205ENST00000483847 MYH2Q9UKX2 1941 aa13.62□□□□□ -0.23
SMARCC1-205ENST00000483847 LAMA2P24043 3122 aaKnown RBP13.62□□□□□ -0.23
SMARCC1-205ENST00000483847 EYA2O00167 538 aa13.62□□□□□ -0.23
SMARCC1-205ENST00000483847 ENTPD3O75355 529 aa13.62□□□□□ -0.23
SMARCC1-205ENST00000483847 HMGCRP04035 888 aa13.62□□□□□ -0.23
SMARCC1-205ENST00000483847 RFX5P48382 616 aaPredicted RBP13.62□□□□□ -0.23
SMARCC1-205ENST00000483847 MAP3K10Q02779 954 aa13.62□□□□□ -0.23
SMARCC1-205ENST00000483847 ATG9AQ7Z3C6 839 aa13.62□□□□□ -0.23
SMARCC1-205ENST00000483847 TDHQ8IZJ6 230 aa13.62□□□□□ -0.23
SMARCC1-205ENST00000483847 LPIN2Q92539 896 aa13.62□□□□□ -0.23
SMARCC1-205ENST00000483847 IDI2Q9BXS1 227 aa13.62□□□□□ -0.23
SMARCC1-205ENST00000483847 NBPF3Q9H094 633 aa13.62□□□□□ -0.23
SMARCC1-205ENST00000483847 PLXNB2O15031 1838 aa13.62□□□□□ -0.23
SMARCC1-205ENST00000483847 CTNND1O60716 968 aaKnown RBP13.61□□□□□ -0.23
SMARCC1-205ENST00000483847 FAM110CQ1W6H9 321 aa13.61□□□□□ -0.23
SMARCC1-205ENST00000483847 ZSCAN29Q8IWY8 852 aaPredicted RBP13.61□□□□□ -0.23
SMARCC1-205ENST00000483847 DDX4Q9NQI0 724 aaKnown RBP13.61□□□□□ -0.23
SMARCC1-205ENST00000483847 GJD2Q9UKL4 321 aa13.61□□□□□ -0.23
SMARCC1-205ENST00000483847 RPTORQ8N122 1335 aa13.61□□□□□ -0.23
SMARCC1-205ENST00000483847 LOC285556D6RIA3 1793 aa13.6□□□□□ -0.23
SMARCC1-205ENST00000483847 FAM196BA6NMK8 535 aa13.6□□□□□ -0.23
SMARCC1-205ENST00000483847 PHKA1P46020 1223 aa13.6□□□□□ -0.23
SMARCC1-205ENST00000483847 UBE2OQ9C0C9 1292 aaKnown RBP13.6□□□□□ -0.23
SMARCC1-205ENST00000483847 USP44Q9H0E7 712 aa13.6□□□□□ -0.23
SMARCC1-205ENST00000483847 C11orf49Q9H6J7 331 aa13.6□□□□□ -0.23
SMARCC1-205ENST00000483847 HMX1Q9NP08 348 aaPredicted RBP13.6□□□□□ -0.23
SMARCC1-205ENST00000483847 GAKO14976 1311 aa13.6□□□□□ -0.23
SMARCC1-205ENST00000483847 PFASO15067 1338 aa13.6□□□□□ -0.23
SMARCC1-205ENST00000483847 SALL1Q9NSC2 1324 aa13.6□□□□□ -0.23
SMARCC1-205ENST00000483847 PICALMQ13492 652 aa13.59□□□□□ -0.23
SMARCC1-205ENST00000483847 ATP2B3Q16720 1220 aa13.59□□□□□ -0.23
SMARCC1-205ENST00000483847 TRIB2Q92519 343 aa13.59□□□□□ -0.23
SMARCC1-205ENST00000483847 OGDHLQ9ULD0 1010 aa13.59□□□□□ -0.23
SMARCC1-205ENST00000483847 VCANP13611 3396 aa13.58□□□□□ -0.23
SMARCC1-205ENST00000483847 PEX10O60683 326 aa13.58□□□□□ -0.24
SMARCC1-205ENST00000483847 SPP2Q13103 211 aa13.58□□□□□ -0.24
SMARCC1-205ENST00000483847 SIL1Q9H173 461 aa13.58□□□□□ -0.24
SMARCC1-205ENST00000483847 PNMA3Q9UL41 463 aa13.58□□□□□ -0.24
SMARCC1-205ENST00000483847 EYSQ5T1H1 3165 aa13.58□□□□□ -0.24
SMARCC1-205ENST00000483847 DNAH12Q6ZR08 3092 aa13.58□□□□□ -0.24
SMARCC1-205ENST00000483847 ATAD5Q96QE3 1844 aa13.57□□□□□ -0.24
SMARCC1-205ENST00000483847 ADORA1P30542 326 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms