RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 CCDC144CPQ8IYA2 1237 aa10.38□□□□□ -0.75
CDC42SE1-204ENST00000483763 FAM184AQ8NB25 1140 aa10.38□□□□□ -0.75
CDC42SE1-204ENST00000483763 TFIP11Q9UBB9 837 aaKnown RBP10.38□□□□□ -0.75
CDC42SE1-204ENST00000483763 GGA1Q9UJY5 639 aa10.38□□□□□ -0.75
CDC42SE1-204ENST00000483763 ATP6V1DQ9Y5K8 247 aa10.38□□□□□ -0.75
CDC42SE1-204ENST00000483763 MYH13Q9UKX3 1938 aa10.38□□□□□ -0.75
CDC42SE1-204ENST00000483763 ANKRD31Q8N7Z5 1873 aa10.37□□□□□ -0.75
CDC42SE1-204ENST00000483763 USP17L12C9JPN9 530 aa10.37□□□□□ -0.75
CDC42SE1-204ENST00000483763 USP17L21D6R901 530 aa10.37□□□□□ -0.75
CDC42SE1-204ENST00000483763 UBE2Q2LH0YL09 131 aa10.37□□□□□ -0.75
CDC42SE1-204ENST00000483763 PRDM1O75626 825 aa10.37□□□□□ -0.75
CDC42SE1-204ENST00000483763 POLD1P28340 1107 aa10.37□□□□□ -0.75
CDC42SE1-204ENST00000483763 OTUD7BQ6GQQ9 843 aa10.37□□□□□ -0.75
CDC42SE1-204ENST00000483763 TTC6Q86TZ1 520 aa10.37□□□□□ -0.75
CDC42SE1-204ENST00000483763 PANK2Q9BZ23 570 aa10.37□□□□□ -0.75
CDC42SE1-204ENST00000483763 DCP1AQ9NPI6 582 aaPredicted RBP10.37□□□□□ -0.75
CDC42SE1-204ENST00000483763 TOMM22Q9NS69 142 aa10.37□□□□□ -0.75
CDC42SE1-204ENST00000483763 FAM217BQ9NTX9 383 aaPredicted RBP10.37□□□□□ -0.75
CDC42SE1-204ENST00000483763 IGSF3O75054 1194 aa10.37□□□□□ -0.75
CDC42SE1-204ENST00000483763 ATP2B4P23634 1241 aa10.37□□□□□ -0.75
CDC42SE1-204ENST00000483763 RESTQ13127 1097 aa10.37□□□□□ -0.75
CDC42SE1-204ENST00000483763 SLC4A8Q2Y0W8 1093 aa10.37□□□□□ -0.75
CDC42SE1-204ENST00000483763 TMEM67Q5HYA8 995 aa10.37□□□□□ -0.75
CDC42SE1-204ENST00000483763 ZNF804AQ7Z570 1209 aa10.37□□□□□ -0.75
CDC42SE1-204ENST00000483763 SGMS1Q86VZ5 419 aa10.37□□□□□ -0.75
CDC42SE1-204ENST00000483763 MICU3Q86XE3 530 aa10.37□□□□□ -0.75
CDC42SE1-204ENST00000483763 ANAPC4Q9UJX5 808 aa10.37□□□□□ -0.75
CDC42SE1-204ENST00000483763 BAZ2AQ9UIF9 1905 aaKnown RBP10.36□□□□□ -0.75
CDC42SE1-204ENST00000483763 C6orf229H3BNL8 230 aa10.36□□□□□ -0.75
CDC42SE1-204ENST00000483763 H3BQV1 296 aa10.36□□□□□ -0.75
CDC42SE1-204ENST00000483763 PPEF1O14829 653 aaPredicted RBP10.36□□□□□ -0.75
CDC42SE1-204ENST00000483763 IFIT3O14879 490 aaKnown RBP10.36□□□□□ -0.75
CDC42SE1-204ENST00000483763 LDHBP07195 334 aaKnown RBP10.36□□□□□ -0.75
CDC42SE1-204ENST00000483763 CYP2D6P10635 497 aa10.36□□□□□ -0.75
CDC42SE1-204ENST00000483763 IL1R1P14778 569 aa10.36□□□□□ -0.75
CDC42SE1-204ENST00000483763 HMGN5P82970 282 aaKnown RBP10.36□□□□□ -0.75
CDC42SE1-204ENST00000483763 IFFO2Q5TF58 517 aa10.36□□□□□ -0.75
CDC42SE1-204ENST00000483763 DZIP1Q86YF9 867 aaKnown RBP10.36□□□□□ -0.75
CDC42SE1-204ENST00000483763 SP8Q8IXZ3 490 aa10.36□□□□□ -0.75
CDC42SE1-204ENST00000483763 WDR66Q8TBY9 1149 aa10.36□□□□□ -0.75
CDC42SE1-204ENST00000483763 TMEM87BQ96K49 555 aa10.36□□□□□ -0.75
CDC42SE1-204ENST00000483763 AIFM3Q96NN9 605 aa10.36□□□□□ -0.75
CDC42SE1-204ENST00000483763 ATP6V0A2Q9Y487 856 aa10.36□□□□□ -0.75
CDC42SE1-204ENST00000483763 LIFRP42702 1097 aa10.36□□□□□ -0.75
CDC42SE1-204ENST00000483763 SLC16A10Q8TF71 515 aa10.36□□□□□ -0.75
CDC42SE1-204ENST00000483763 PHKBQ93100 1093 aa10.36□□□□□ -0.75
CDC42SE1-204ENST00000483763 KRT23Q9C075 422 aa10.36□□□□□ -0.75
CDC42SE1-204ENST00000483763 FTOQ9C0B1 505 aaKnown RBP eCLIP10.36□□□□□ -0.75
CDC42SE1-204ENST00000483763 CNNM2Q9H8M5 875 aa10.36□□□□□ -0.75
CDC42SE1-204ENST00000483763 MKRN1Q9UHC7 482 aaKnown RBP10.36□□□□□ -0.75
CDC42SE1-204ENST00000483763 TIAM2Q8IVF5 1701 aa10.35□□□□□ -0.75
CDC42SE1-204ENST00000483763 SYCE3A1L190 88 aa10.35□□□□□ -0.75
CDC42SE1-204ENST00000483763 RIMBP2O15034 1052 aa10.35□□□□□ -0.75
CDC42SE1-204ENST00000483763 MBD3O95983 291 aa10.35□□□□□ -0.75
CDC42SE1-204ENST00000483763 METAP2P50579 478 aaKnown RBP eCLIP10.35□□□□□ -0.75
CDC42SE1-204ENST00000483763 ZNF445P59923 1031 aa10.35□□□□□ -0.75
CDC42SE1-204ENST00000483763 NTRK3Q16288 839 aa10.35□□□□□ -0.75
CDC42SE1-204ENST00000483763 FGRP09769 529 aa10.34□□□□□ -0.75
CDC42SE1-204ENST00000483763 USP17L8P0C7I0 530 aa10.34□□□□□ -0.75
CDC42SE1-204ENST00000483763 NPR1P16066 1061 aa10.34□□□□□ -0.75
CDC42SE1-204ENST00000483763 PDE6BP35913 854 aa10.34□□□□□ -0.75
CDC42SE1-204ENST00000483763 UBE2HP62256 183 aa10.34□□□□□ -0.75
CDC42SE1-204ENST00000483763 NFXL1Q6ZNB6 911 aa10.34□□□□□ -0.75
CDC42SE1-204ENST00000483763 SH3RF3Q8TEJ3 882 aaPredicted RBP10.34□□□□□ -0.75
CDC42SE1-204ENST00000483763 GRPEL1Q9HAV7 217 aa10.34□□□□□ -0.75
CDC42SE1-204ENST00000483763 ORC3Q9UBD5 711 aaPredicted RBP10.34□□□□□ -0.75
CDC42SE1-204ENST00000483763 LTBP1Q14766 1721 aa10.34□□□□□ -0.75
CDC42SE1-204ENST00000483763 NRXN2Q9P2S2 1712 aa10.34□□□□□ -0.75
CDC42SE1-204ENST00000483763 CPLX1O14810 134 aa10.34□□□□□ -0.75
CDC42SE1-204ENST00000483763 ZBTB43O43298 467 aa10.34□□□□□ -0.75
CDC42SE1-204ENST00000483763 RANBP6O60518 1105 aaKnown RBP10.34□□□□□ -0.75
CDC42SE1-204ENST00000483763 YBX3P16989 372 aaKnown RBP eCLIP10.34□□□□□ -0.75
CDC42SE1-204ENST00000483763 CHRNA5P30532 468 aa10.34□□□□□ -0.75
CDC42SE1-204ENST00000483763 KRT85P78386 507 aa10.34□□□□□ -0.75
CDC42SE1-204ENST00000483763 GPR162Q16538 588 aa10.34□□□□□ -0.75
CDC42SE1-204ENST00000483763 MFSD14BQ5SR56 506 aa10.34□□□□□ -0.75
CDC42SE1-204ENST00000483763 SPTY2D1Q68D10 685 aaPredicted RBP10.34□□□□□ -0.75
CDC42SE1-204ENST00000483763 GIMAP6Q6P9H5 292 aa10.34□□□□□ -0.75
CDC42SE1-204ENST00000483763 CMTR1Q8N1G2 835 aaKnown RBP10.34□□□□□ -0.75
CDC42SE1-204ENST00000483763 ZNF622Q969S3 477 aaKnown RBP eCLIP10.34□□□□□ -0.75
CDC42SE1-204ENST00000483763 SLC12A7Q9Y666 1083 aa10.34□□□□□ -0.75
CDC42SE1-204ENST00000483763 DHX16O60231 1041 aaKnown RBP10.33□□□□□ -0.76
CDC42SE1-204ENST00000483763 NMT2O60551 498 aa10.33□□□□□ -0.76
CDC42SE1-204ENST00000483763 CEBPZQ03701 1054 aaKnown RBP10.33□□□□□ -0.76
CDC42SE1-204ENST00000483763 SEC23AQ15436 765 aa10.33□□□□□ -0.76
CDC42SE1-204ENST00000483763 FBXO18Q8NFZ0 1043 aa10.33□□□□□ -0.76
CDC42SE1-204ENST00000483763 MXD3Q9BW11 206 aa10.33□□□□□ -0.76
CDC42SE1-204ENST00000483763 RTFDC1Q9BY42 306 aaPredicted RBP10.33□□□□□ -0.76
CDC42SE1-204ENST00000483763 CRNKL1Q9BZJ0 848 aaKnown RBP10.33□□□□□ -0.76
CDC42SE1-204ENST00000483763 RNF41Q9H4P4 317 aaPredicted RBP10.33□□□□□ -0.76
CDC42SE1-204ENST00000483763 CHD4Q14839 1912 aa10.33□□□□□ -0.76
CDC42SE1-204ENST00000483763 TNKSO95271 1327 aa10.33□□□□□ -0.76
CDC42SE1-204ENST00000483763 DUOX1Q9NRD9 1551 aa10.33□□□□□ -0.76
CDC42SE1-204ENST00000483763 GTF2IP78347 998 aa10.33□□□□□ -0.76
CDC42SE1-204ENST00000483763 ENAHQ8N8S7 591 aaPredicted RBP10.33□□□□□ -0.76
CDC42SE1-204ENST00000483763 LEO1Q8WVC0 666 aaPredicted RBP10.33□□□□□ -0.76
CDC42SE1-204ENST00000483763 MASTLQ96GX5 879 aa10.33□□□□□ -0.76
CDC42SE1-204ENST00000483763 ATP8A2Q9NTI2 1148 aa10.33□□□□□ -0.76
CDC42SE1-204ENST00000483763 MCM9Q9NXL9 1143 aa10.33□□□□□ -0.76
CDC42SE1-204ENST00000483763 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms