RNA–Protein interactions for RNA: ENST00000483414.1

LIMK1-205, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 3,374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-205ENST00000483414 TAF6LQ9Y6J9 622 aa11.49□□□□□ -0.57
LIMK1-205ENST00000483414 GLTPD2A6NH11 291 aa11.48□□□□□ -0.57
LIMK1-205ENST00000483414 DDNO94850 711 aaPredicted RBP11.48□□□□□ -0.57
LIMK1-205ENST00000483414 MBD4O95243 580 aa11.48□□□□□ -0.57
LIMK1-205ENST00000483414 BTDP43251 543 aa11.48□□□□□ -0.57
LIMK1-205ENST00000483414 ALX1Q15699 326 aa11.48□□□□□ -0.57
LIMK1-205ENST00000483414 IDI2Q9BXS1 227 aa11.48□□□□□ -0.57
LIMK1-205ENST00000483414 ARMT1Q9H993 441 aa11.48□□□□□ -0.57
LIMK1-205ENST00000483414 MYOZ2Q9NPC6 264 aa11.48□□□□□ -0.57
LIMK1-205ENST00000483414 WNT10BO00744 389 aa11.48□□□□□ -0.57
LIMK1-205ENST00000483414 USP17L8P0C7I0 530 aa11.48□□□□□ -0.57
LIMK1-205ENST00000483414 MIGA1Q8NAN2 632 aa11.48□□□□□ -0.57
LIMK1-205ENST00000483414 GRPEL1Q9HAV7 217 aa11.48□□□□□ -0.57
LIMK1-205ENST00000483414 AATFQ9NY61 560 aaKnown RBP eCLIP11.48□□□□□ -0.57
LIMK1-205ENST00000483414 FAM198AQ9UFP1 575 aa11.48□□□□□ -0.57
LIMK1-205ENST00000483414 DOCK1Q14185 1865 aa11.48□□□□□ -0.57
LIMK1-205ENST00000483414 SMIM22K7EJ46 135 aa11.48□□□□□ -0.57
LIMK1-205ENST00000483414 RBM25P49756 843 aaKnown RBP11.48□□□□□ -0.57
LIMK1-205ENST00000483414 GSTO1P78417 241 aa11.48□□□□□ -0.57
LIMK1-205ENST00000483414 SPDYE2Q495Y8 402 aa11.48□□□□□ -0.57
LIMK1-205ENST00000483414 DZIP1Q86YF9 867 aaKnown RBP11.48□□□□□ -0.57
LIMK1-205ENST00000483414 TRPM4Q8TD43 1214 aa11.48□□□□□ -0.57
LIMK1-205ENST00000483414 FGRP09769 529 aa11.47□□□□□ -0.57
LIMK1-205ENST00000483414 MRE11P49959 708 aa11.47□□□□□ -0.57
LIMK1-205ENST00000483414 EIF6P56537 245 aaKnown RBP11.47□□□□□ -0.57
LIMK1-205ENST00000483414 CFAP100Q494V2 611 aa11.47□□□□□ -0.57
LIMK1-205ENST00000483414 MICALL2Q8IY33 904 aa11.47□□□□□ -0.57
LIMK1-205ENST00000483414 TEKT1Q969V4 418 aa11.47□□□□□ -0.57
LIMK1-205ENST00000483414 DIAPH3Q9NSV4 1193 aa11.47□□□□□ -0.57
LIMK1-205ENST00000483414 ASTN2O75129 1339 aaPredicted RBP11.47□□□□□ -0.57
LIMK1-205ENST00000483414 TRPM7Q96QT4 1865 aa11.47□□□□□ -0.57
LIMK1-205ENST00000483414 MAGEB6P1A0A0J9YX57 407 aa11.47□□□□□ -0.57
LIMK1-205ENST00000483414 SH3BP5LQ7L8J4 393 aa11.47□□□□□ -0.57
LIMK1-205ENST00000483414 METTL16Q86W50 562 aaKnown RBP11.47□□□□□ -0.57
LIMK1-205ENST00000483414 FLT1P17948 1338 aa11.47□□□□□ -0.57
LIMK1-205ENST00000483414 F8W031 263 aaPredicted RBP11.47□□□□□ -0.57
LIMK1-205ENST00000483414 HSPA4P34932 840 aa11.47□□□□□ -0.57
LIMK1-205ENST00000483414 TSGA10IPQ3SY00 556 aa11.47□□□□□ -0.57
LIMK1-205ENST00000483414 GIMAP6Q6P9H5 292 aa11.47□□□□□ -0.57
LIMK1-205ENST00000483414 DCP1AQ9NPI6 582 aaPredicted RBP11.47□□□□□ -0.57
LIMK1-205ENST00000483414 PARP14Q460N5 1801 aa11.46□□□□□ -0.57
LIMK1-205ENST00000483414 EPS15P42566 896 aa11.46□□□□□ -0.57
LIMK1-205ENST00000483414 NFIAQ12857 509 aa11.46□□□□□ -0.57
LIMK1-205ENST00000483414 NBPF9Q3BBW0 867 aa11.46□□□□□ -0.57
LIMK1-205ENST00000483414 CNOT7Q9UIV1 285 aaKnown RBP11.46□□□□□ -0.57
LIMK1-205ENST00000483414 PTPRFP10586 1907 aa11.46□□□□□ -0.57
LIMK1-205ENST00000483414 PATL2C9JE40 543 aaKnown RBP11.46□□□□□ -0.58
LIMK1-205ENST00000483414 LRRFIP1Q32MZ4 808 aaKnown RBP11.46□□□□□ -0.58
LIMK1-205ENST00000483414 ANAPC4Q9UJX5 808 aa11.46□□□□□ -0.58
LIMK1-205ENST00000483414 PALD1Q9ULE6 856 aa11.46□□□□□ -0.58
LIMK1-205ENST00000483414 CERS3Q8IU89 383 aa11.45□□□□□ -0.58
LIMK1-205ENST00000483414 ZFPM1Q8IX07 1006 aa11.45□□□□□ -0.58
LIMK1-205ENST00000483414 SDR42E1Q8WUS8 393 aa11.45□□□□□ -0.58
LIMK1-205ENST00000483414 FGAP02671 866 aa11.45□□□□□ -0.58
LIMK1-205ENST00000483414 FKBP1CQ5VVH2 108 aa11.45□□□□□ -0.58
LIMK1-205ENST00000483414 TEPSINQ96N21 525 aa11.45□□□□□ -0.58
LIMK1-205ENST00000483414 G3V3G9 751 aa11.45□□□□□ -0.58
LIMK1-205ENST00000483414 ST18O60284 1047 aa11.45□□□□□ -0.58
LIMK1-205ENST00000483414 MAP3K10Q02779 954 aa11.45□□□□□ -0.58
LIMK1-205ENST00000483414 SBK1Q52WX2 424 aa11.45□□□□□ -0.58
LIMK1-205ENST00000483414 DCAF8Q5TAQ9 597 aa11.45□□□□□ -0.58
LIMK1-205ENST00000483414 CTR9Q6PD62 1173 aa11.45□□□□□ -0.58
LIMK1-205ENST00000483414 SAMD7Q7Z3H4 446 aa11.45□□□□□ -0.58
LIMK1-205ENST00000483414 IFNL3Q8IZI9 196 aa11.45□□□□□ -0.58
LIMK1-205ENST00000483414 FBXW7Q969H0 707 aa11.45□□□□□ -0.58
LIMK1-205ENST00000483414 SNX21Q969T3 373 aa11.45□□□□□ -0.58
LIMK1-205ENST00000483414 GNAT2P19087 354 aa11.44□□□□□ -0.58
LIMK1-205ENST00000483414 GABPAQ06546 454 aa11.44□□□□□ -0.58
LIMK1-205ENST00000483414 STOX1Q6ZVD7 989 aa11.44□□□□□ -0.58
LIMK1-205ENST00000483414 RASEFQ8IZ41 740 aa11.44□□□□□ -0.58
LIMK1-205ENST00000483414 RUFY2Q8WXA3 655 aa11.44□□□□□ -0.58
LIMK1-205ENST00000483414 CYP21A2P08686 494 aa11.44□□□□□ -0.58
LIMK1-205ENST00000483414 NEK4P51957 841 aa11.44□□□□□ -0.58
LIMK1-205ENST00000483414 CAVIN1Q6NZI2 390 aaKnown RBP11.44□□□□□ -0.58
LIMK1-205ENST00000483414 GAS2L3Q86XJ1 694 aa11.44□□□□□ -0.58
LIMK1-205ENST00000483414 SLF2Q8IX21 1173 aa11.44□□□□□ -0.58
LIMK1-205ENST00000483414 ZNF70Q9UC06 446 aaPredicted RBP11.44□□□□□ -0.58
LIMK1-205ENST00000483414 MYH4Q9Y623 1939 aa11.44□□□□□ -0.58
LIMK1-205ENST00000483414 LDHCP07864 332 aa11.44□□□□□ -0.58
LIMK1-205ENST00000483414 AIDAQ96BJ3 306 aa11.44□□□□□ -0.58
LIMK1-205ENST00000483414 DNAJC18Q9H819 358 aa11.44□□□□□ -0.58
LIMK1-205ENST00000483414 ANO2Q9NQ90 1003 aa11.44□□□□□ -0.58
LIMK1-205ENST00000483414 ATP8A2Q9NTI2 1148 aa11.44□□□□□ -0.58
LIMK1-205ENST00000483414 PITPNM2Q9BZ72 1349 aa11.43□□□□□ -0.58
LIMK1-205ENST00000483414 PRPF40AO75400 957 aaKnown RBP11.43□□□□□ -0.58
LIMK1-205ENST00000483414 PRDM10Q9NQV6 1147 aa11.43□□□□□ -0.58
LIMK1-205ENST00000483414 RBM8AQ9Y5S9 174 aaKnown RBP11.43□□□□□ -0.58
LIMK1-205ENST00000483414 GJA3Q9Y6H8 435 aa11.43□□□□□ -0.58
LIMK1-205ENST00000483414 ESPNB1AK53 854 aa11.43□□□□□ -0.58
LIMK1-205ENST00000483414 CLCN1P35523 988 aa11.43□□□□□ -0.58
LIMK1-205ENST00000483414 RABEP1Q15276 862 aa11.43□□□□□ -0.58
LIMK1-205ENST00000483414 KIF4BQ2VIQ3 1234 aa11.43□□□□□ -0.58
LIMK1-205ENST00000483414 SKOR2Q2VWA4 1001 aaPredicted RBP11.43□□□□□ -0.58
LIMK1-205ENST00000483414 TBC1D10CQ8IV04 446 aa11.43□□□□□ -0.58
LIMK1-205ENST00000483414 CDAN1Q8IWY9 1227 aa11.43□□□□□ -0.58
LIMK1-205ENST00000483414 OSBPL5Q9H0X9 879 aaPredicted RBP11.43□□□□□ -0.58
LIMK1-205ENST00000483414 TDRD3Q9H7E2 651 aaKnown RBP11.43□□□□□ -0.58
LIMK1-205ENST00000483414 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.43□□□□□ -0.58
LIMK1-205ENST00000483414 SLC27A2O14975 620 aa11.42□□□□□ -0.58
LIMK1-205ENST00000483414 CHAMP1Q96JM3 812 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms