RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 ATRNO75882 1429 aa20.77■□□□□ 0.92
SSR4-209ENST00000482902 WDHD1O75717 1129 aaPredicted RBP20.77■□□□□ 0.92
SSR4-209ENST00000482902 SASH3O75995 380 aa20.77■□□□□ 0.92
SSR4-209ENST00000482902 CDKL5O76039 1030 aa20.77■□□□□ 0.92
SSR4-209ENST00000482902 PDE8BO95263 885 aa20.77■□□□□ 0.92
SSR4-209ENST00000482902 PHKA1P46020 1223 aa20.77■□□□□ 0.92
SSR4-209ENST00000482902 NLRP12P59046 1061 aa20.77■□□□□ 0.92
SSR4-209ENST00000482902 SLC39A14Q15043 492 aa20.77■□□□□ 0.92
SSR4-209ENST00000482902 TRIM65Q6PJ69 517 aa20.77■□□□□ 0.92
SSR4-209ENST00000482902 HOMER1Q86YM7 354 aa20.77■□□□□ 0.92
SSR4-209ENST00000482902 B4E1Z4 1266 aa20.76■□□□□ 0.91
SSR4-209ENST00000482902 ATP8B1O43520 1251 aa20.76■□□□□ 0.91
SSR4-209ENST00000482902 PDE6AP16499 860 aa20.76■□□□□ 0.91
SSR4-209ENST00000482902 CCDC102BQ68D86 513 aa20.76■□□□□ 0.91
SSR4-209ENST00000482902 RGS22Q8NE09 1264 aa20.76■□□□□ 0.91
SSR4-209ENST00000482902 SENP2Q9HC62 589 aa20.76■□□□□ 0.91
SSR4-209ENST00000482902 TRMT112Q9UI30 125 aaKnown RBP20.76■□□□□ 0.91
SSR4-209ENST00000482902 TBC1D2BQ9UPU7 963 aa20.76■□□□□ 0.91
SSR4-209ENST00000482902 MROH7-TTC4A0A0A0MT08 1334 aa20.76■□□□□ 0.91
SSR4-209ENST00000482902 TBC1D8O95759 1140 aa20.76■□□□□ 0.91
SSR4-209ENST00000482902 KRT40Q6A162 431 aa20.76■□□□□ 0.91
SSR4-209ENST00000482902 APOA5Q6Q788 366 aa20.76■□□□□ 0.91
SSR4-209ENST00000482902 MICU3Q86XE3 530 aa20.76■□□□□ 0.91
SSR4-209ENST00000482902 VPS37DQ86XT2 251 aa20.76■□□□□ 0.91
SSR4-209ENST00000482902 SLAIN2Q9P270 581 aa20.76■□□□□ 0.91
SSR4-209ENST00000482902 WWC3Q9ULE0 1092 aa20.76■□□□□ 0.91
SSR4-209ENST00000482902 CDC27P30260 824 aa20.75■□□□□ 0.91
SSR4-209ENST00000482902 CPLX2Q6PUV4 134 aaKnown RBP20.75■□□□□ 0.91
SSR4-209ENST00000482902 MNS1Q8NEH6 495 aa20.75■□□□□ 0.91
SSR4-209ENST00000482902 PHKBQ93100 1093 aa20.75■□□□□ 0.91
SSR4-209ENST00000482902 SRRTQ9BXP5 876 aaKnown RBP20.75■□□□□ 0.91
SSR4-209ENST00000482902 DDX60Q8IY21 1712 aaKnown RBP20.75■□□□□ 0.91
SSR4-209ENST00000482902 DHX8Q14562 1220 aaKnown RBP20.75■□□□□ 0.91
SSR4-209ENST00000482902 KRBA2Q6ZNG9 492 aa20.75■□□□□ 0.91
SSR4-209ENST00000482902 MYH7P12883 1935 aa20.74■□□□□ 0.91
SSR4-209ENST00000482902 EFCAB8A8MWE9 144 aa20.74■□□□□ 0.91
SSR4-209ENST00000482902 OAS2P29728 719 aaKnown RBP20.74■□□□□ 0.91
SSR4-209ENST00000482902 GNL2Q13823 731 aaKnown RBP20.74■□□□□ 0.91
SSR4-209ENST00000482902 CARD6Q9BX69 1037 aa20.74■□□□□ 0.91
SSR4-209ENST00000482902 AKAP11Q9UKA4 1901 aa20.74■□□□□ 0.91
SSR4-209ENST00000482902 C4AP0C0L4 1744 aa20.74■□□□□ 0.91
SSR4-209ENST00000482902 C4BP0C0L5 1744 aa20.74■□□□□ 0.91
SSR4-209ENST00000482902 NRDCO43847 1150 aa20.74■□□□□ 0.91
SSR4-209ENST00000482902 UQCRFS1P1P0C7P4 283 aa20.74■□□□□ 0.91
SSR4-209ENST00000482902 ARID4AP29374 1257 aaPredicted RBP20.74■□□□□ 0.91
SSR4-209ENST00000482902 NFXL1Q6ZNB6 911 aa20.74■□□□□ 0.91
SSR4-209ENST00000482902 AIDAQ96BJ3 306 aa20.74■□□□□ 0.91
SSR4-209ENST00000482902 TMEM87BQ96K49 555 aa20.74■□□□□ 0.91
SSR4-209ENST00000482902 ZCCHC17Q9NP64 241 aaKnown RBP20.74■□□□□ 0.91
SSR4-209ENST00000482902 PARP3Q9Y6F1 533 aa20.74■□□□□ 0.91
SSR4-209ENST00000482902 TCRBV5S4A2TA0A5A2 114 aa20.73■□□□□ 0.91
SSR4-209ENST00000482902 ZBTB43O43298 467 aa20.73■□□□□ 0.91
SSR4-209ENST00000482902 PDE8AO60658 829 aa20.73■□□□□ 0.91
SSR4-209ENST00000482902 CYP19A1P11511 503 aaPredicted RBP20.73■□□□□ 0.91
SSR4-209ENST00000482902 SYKP43405 635 aa20.73■□□□□ 0.91
SSR4-209ENST00000482902 IGDCC4Q8TDY8 1250 aa20.73■□□□□ 0.91
SSR4-209ENST00000482902 STRBPQ96SI9 672 aaKnown RBP20.73■□□□□ 0.91
SSR4-209ENST00000482902 NCAPHQ15003 741 aa20.73■□□□□ 0.91
SSR4-209ENST00000482902 ISM2Q6H9L7 571 aa20.73■□□□□ 0.91
SSR4-209ENST00000482902 HELBQ8NG08 1087 aaPredicted RBP20.73■□□□□ 0.91
SSR4-209ENST00000482902 ZBTB1Q9Y2K1 713 aa20.73■□□□□ 0.91
SSR4-209ENST00000482902 CCP110O43303 1012 aa20.72■□□□□ 0.91
SSR4-209ENST00000482902 URI1O94763 535 aaPredicted RBP20.72■□□□□ 0.91
SSR4-209ENST00000482902 CC2D1AQ6P1N0 951 aaPredicted RBP20.72■□□□□ 0.91
SSR4-209ENST00000482902 JMYQ8N9B5 988 aa20.72■□□□□ 0.91
SSR4-209ENST00000482902 SLC4A9Q96Q91 983 aa20.72■□□□□ 0.91
SSR4-209ENST00000482902 INCENPQ9NQS7 918 aa20.72■□□□□ 0.91
SSR4-209ENST00000482902 GOLGA8AA7E2F4 631 aa20.72■□□□□ 0.91
SSR4-209ENST00000482902 PPP6R2O75170 966 aa20.72■□□□□ 0.91
SSR4-209ENST00000482902 TPM1P09493 284 aa20.72■□□□□ 0.91
SSR4-209ENST00000482902 IARSP41252 1262 aaKnown RBP20.72■□□□□ 0.91
SSR4-209ENST00000482902 PUM3Q15397 648 aaKnown RBP20.72■□□□□ 0.91
SSR4-209ENST00000482902 TMEM67Q5HYA8 995 aa20.72■□□□□ 0.91
SSR4-209ENST00000482902 MYL10Q9BUA6 226 aa20.72■□□□□ 0.91
SSR4-209ENST00000482902 LY9Q9HBG7 655 aa20.72■□□□□ 0.91
SSR4-209ENST00000482902 XIRP1Q702N8 1843 aaKnown RBP20.71■□□□□ 0.91
SSR4-209ENST00000482902 PTPAQ15257 358 aa20.71■□□□□ 0.91
SSR4-209ENST00000482902 NTRK3Q16288 839 aa20.71■□□□□ 0.91
SSR4-209ENST00000482902 SHC4Q6S5L8 630 aa20.71■□□□□ 0.91
SSR4-209ENST00000482902 LPIN2Q92539 896 aa20.71■□□□□ 0.91
SSR4-209ENST00000482902 EPC1Q9H2F5 836 aa20.71■□□□□ 0.91
SSR4-209ENST00000482902 HPSEQ9Y251 543 aa20.71■□□□□ 0.91
SSR4-209ENST00000482902 RANBP6O60518 1105 aaKnown RBP20.7■□□□□ 0.91
SSR4-209ENST00000482902 TRIM29Q14134 588 aa20.7■□□□□ 0.91
SSR4-209ENST00000482902 SMC1AQ14683 1233 aaKnown RBP20.7■□□□□ 0.91
SSR4-209ENST00000482902 ZSCAN26Q16670 478 aa20.7■□□□□ 0.91
SSR4-209ENST00000482902 REXO1L1PQ8IX06 675 aa20.7■□□□□ 0.91
SSR4-209ENST00000482902 SGMS1Q86VZ5 419 aa20.7■□□□□ 0.9
SSR4-209ENST00000482902 MAP3K14Q99558 947 aa20.7■□□□□ 0.9
SSR4-209ENST00000482902 FAM217BQ9NTX9 383 aaPredicted RBP20.7■□□□□ 0.9
SSR4-209ENST00000482902 LMOD1P29536 600 aaPredicted RBP20.69■□□□□ 0.9
SSR4-209ENST00000482902 GPS2Q13227 327 aa20.69■□□□□ 0.9
SSR4-209ENST00000482902 ALX1Q15699 326 aa20.69■□□□□ 0.9
SSR4-209ENST00000482902 SPATA5Q8NB90 893 aa20.69■□□□□ 0.9
SSR4-209ENST00000482902 RASSF4Q9H2L5 321 aa20.69■□□□□ 0.9
SSR4-209ENST00000482902 EPB41L4AQ9HCS5 686 aaPredicted RBP20.69■□□□□ 0.9
SSR4-209ENST00000482902 TUBE1Q9UJT0 475 aa20.69■□□□□ 0.9
SSR4-209ENST00000482902 PATL2C9JE40 543 aaKnown RBP20.69■□□□□ 0.9
SSR4-209ENST00000482902 IKBKBO14920 756 aa20.69■□□□□ 0.9
SSR4-209ENST00000482902 FGFR2P21802 821 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms