RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 KAT14Q9H8E8 782 aa10.48□□□□□ -0.73
CALD1-220ENST00000482470 CCDC194A0A1B0GVG4 234 aa10.48□□□□□ -0.73
CALD1-220ENST00000482470 ZBTB22O15209 634 aa10.48□□□□□ -0.73
CALD1-220ENST00000482470 NEMFO60524 1076 aa10.48□□□□□ -0.73
CALD1-220ENST00000482470 MCM7P33993 719 aa10.48□□□□□ -0.73
CALD1-220ENST00000482470 PDE4BQ07343 736 aa10.48□□□□□ -0.73
CALD1-220ENST00000482470 NR5A1Q13285 461 aa10.48□□□□□ -0.73
CALD1-220ENST00000482470 MYRIPQ8NFW9 859 aa10.48□□□□□ -0.73
CALD1-220ENST00000482470 SENP2Q9HC62 589 aa10.48□□□□□ -0.73
CALD1-220ENST00000482470 RTEL1Q9NZ71 1219 aa10.48□□□□□ -0.73
CALD1-220ENST00000482470 RIPOR2Q9Y4F9 1068 aa10.48□□□□□ -0.73
CALD1-220ENST00000482470 LMTK3Q96Q04 1460 aa10.48□□□□□ -0.73
CALD1-220ENST00000482470 SSBP05455 408 aaKnown RBP eCLIP10.48□□□□□ -0.73
CALD1-220ENST00000482470 CASP7P55210 303 aa10.48□□□□□ -0.73
CALD1-220ENST00000482470 FANCCQ00597 558 aa10.48□□□□□ -0.73
CALD1-220ENST00000482470 KIF23Q02241 960 aaPredicted RBP10.48□□□□□ -0.73
CALD1-220ENST00000482470 PPARAQ07869 468 aa10.48□□□□□ -0.73
CALD1-220ENST00000482470 SYT10Q6XYQ8 523 aa10.48□□□□□ -0.73
CALD1-220ENST00000482470 ZNF654Q8IZM8 581 aa10.48□□□□□ -0.73
CALD1-220ENST00000482470 KIAA1524Q8TCG1 905 aa10.48□□□□□ -0.73
CALD1-220ENST00000482470 CCDC47Q96A33 483 aaKnown RBP10.48□□□□□ -0.73
CALD1-220ENST00000482470 STRBPQ96SI9 672 aaKnown RBP10.48□□□□□ -0.73
CALD1-220ENST00000482470 FBXO3Q9UK99 471 aa10.48□□□□□ -0.73
CALD1-220ENST00000482470 MAPK8IP1Q9UQF2 711 aa10.48□□□□□ -0.73
CALD1-220ENST00000482470 PIK3C2AO00443 1686 aa10.47□□□□□ -0.73
CALD1-220ENST00000482470 KCNQ2O43526 872 aa10.47□□□□□ -0.73
CALD1-220ENST00000482470 IPO7O95373 1038 aaKnown RBP10.47□□□□□ -0.73
CALD1-220ENST00000482470 SOGA3Q5TF21 947 aa10.47□□□□□ -0.73
CALD1-220ENST00000482470 TPTE2Q6XPS3 522 aa10.47□□□□□ -0.73
CALD1-220ENST00000482470 SMARCC2Q8TAQ2 1214 aa10.47□□□□□ -0.73
CALD1-220ENST00000482470 SMARCC1Q92922 1105 aaPredicted RBP10.47□□□□□ -0.73
CALD1-220ENST00000482470 TRIM34Q9BYJ4 488 aa10.47□□□□□ -0.73
CALD1-220ENST00000482470 GOLGA8FQ08AF8 430 aa10.47□□□□□ -0.73
CALD1-220ENST00000482470 GOLGA8DPQ0D2H9 430 aa10.47□□□□□ -0.73
CALD1-220ENST00000482470 KCNB2Q92953 911 aa10.47□□□□□ -0.73
CALD1-220ENST00000482470 SAP30BPQ9UHR5 308 aaKnown RBP10.47□□□□□ -0.73
CALD1-220ENST00000482470 ZMYM6O95789 1325 aa10.47□□□□□ -0.73
CALD1-220ENST00000482470 CDC27P30260 824 aa10.47□□□□□ -0.73
CALD1-220ENST00000482470 MYL5Q02045 173 aa10.47□□□□□ -0.73
CALD1-220ENST00000482470 TDRD7Q8NHU6 1098 aaKnown RBP10.47□□□□□ -0.73
CALD1-220ENST00000482470 UBXN4Q92575 508 aa10.47□□□□□ -0.73
CALD1-220ENST00000482470 RPGRQ92834 1020 aaKnown RBP10.47□□□□□ -0.73
CALD1-220ENST00000482470 TNKSO95271 1327 aa10.47□□□□□ -0.73
CALD1-220ENST00000482470 VIRMAQ69YN4 1812 aaKnown RBP10.46□□□□□ -0.73
CALD1-220ENST00000482470 UBE2Q2LH0YL09 131 aa10.46□□□□□ -0.73
CALD1-220ENST00000482470 AP5Z1O43299 807 aa10.46□□□□□ -0.73
CALD1-220ENST00000482470 HIBADHP31937 336 aaKnown RBP10.46□□□□□ -0.73
CALD1-220ENST00000482470 RBM5P52756 815 aaKnown RBP eCLIP10.46□□□□□ -0.73
CALD1-220ENST00000482470 HEATR3Q7Z4Q2 680 aa10.46□□□□□ -0.73
CALD1-220ENST00000482470 MB21D2Q8IYB1 491 aaPredicted RBP10.46□□□□□ -0.73
CALD1-220ENST00000482470 GRAMD1CQ8IYS0 662 aa10.46□□□□□ -0.73
CALD1-220ENST00000482470 FANCBQ8NB91 859 aa10.46□□□□□ -0.73
CALD1-220ENST00000482470 ZHX3Q9H4I2 956 aa10.46□□□□□ -0.73
CALD1-220ENST00000482470 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.46□□□□□ -0.73
CALD1-220ENST00000482470 NEDD4P46934 1319 aa10.46□□□□□ -0.73
CALD1-220ENST00000482470 KIF28PB7ZC32 967 aa10.46□□□□□ -0.73
CALD1-220ENST00000482470 COBLO75128 1261 aa10.46□□□□□ -0.73
CALD1-220ENST00000482470 DEXIO95424 95 aa10.46□□□□□ -0.73
CALD1-220ENST00000482470 ERFEQ4G0M1 354 aa10.46□□□□□ -0.73
CALD1-220ENST00000482470 KLHL34Q8N239 644 aa10.46□□□□□ -0.73
CALD1-220ENST00000482470 AK7Q96M32 723 aa10.46□□□□□ -0.73
CALD1-220ENST00000482470 SERTAD1Q9UHV2 236 aa10.46□□□□□ -0.73
CALD1-220ENST00000482470 MPHOSPH10O00566 681 aaKnown RBP10.46□□□□□ -0.74
CALD1-220ENST00000482470 SH2B2O14492 632 aaPredicted RBP10.46□□□□□ -0.74
CALD1-220ENST00000482470 TSPY3P0CV98 308 aa10.46□□□□□ -0.74
CALD1-220ENST00000482470 TSPY8P0CW00 308 aa10.46□□□□□ -0.74
CALD1-220ENST00000482470 FDPSP14324 419 aaKnown RBP10.46□□□□□ -0.74
CALD1-220ENST00000482470 NLRP12P59046 1061 aa10.46□□□□□ -0.74
CALD1-220ENST00000482470 GNG11P61952 73 aa10.46□□□□□ -0.74
CALD1-220ENST00000482470 PIK3AP1Q6ZUJ8 805 aa10.46□□□□□ -0.74
CALD1-220ENST00000482470 ZSCAN29Q8IWY8 852 aaPredicted RBP10.46□□□□□ -0.74
CALD1-220ENST00000482470 CDK5RAP3Q96JB5 506 aa10.46□□□□□ -0.74
CALD1-220ENST00000482470 BCL2L12Q9HB09 334 aa10.46□□□□□ -0.74
CALD1-220ENST00000482470 RTCBQ9Y3I0 505 aaKnown RBP10.46□□□□□ -0.74
CALD1-220ENST00000482470 FER1L4A9Z1Z3 1794 aa10.46□□□□□ -0.74
CALD1-220ENST00000482470 UBAP1LF5GYI3 381 aa10.45□□□□□ -0.74
CALD1-220ENST00000482470 RPS8P62241 208 aaKnown RBP10.45□□□□□ -0.74
CALD1-220ENST00000482470 NOSTRINQ8IVI9 506 aa10.45□□□□□ -0.74
CALD1-220ENST00000482470 MAGEC2Q9UBF1 373 aaPredicted RBP10.45□□□□□ -0.74
CALD1-220ENST00000482470 PCDHA5Q9Y5H7 936 aa10.45□□□□□ -0.74
CALD1-220ENST00000482470 CMA1P23946 247 aa10.45□□□□□ -0.74
CALD1-220ENST00000482470 KRT2P35908 639 aa10.45□□□□□ -0.74
CALD1-220ENST00000482470 UBA7P41226 1012 aa10.45□□□□□ -0.74
CALD1-220ENST00000482470 PICALMQ13492 652 aa10.45□□□□□ -0.74
CALD1-220ENST00000482470 SLC39A14Q15043 492 aa10.45□□□□□ -0.74
CALD1-220ENST00000482470 CCDC144BQ3MJ40 725 aa10.45□□□□□ -0.74
CALD1-220ENST00000482470 RILPL1Q5EBL4 403 aa10.45□□□□□ -0.74
CALD1-220ENST00000482470 RRAGBQ5VZM2 374 aa10.45□□□□□ -0.74
CALD1-220ENST00000482470 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.45□□□□□ -0.74
CALD1-220ENST00000482470 LRRC8AQ8IWT6 810 aa10.45□□□□□ -0.74
CALD1-220ENST00000482470 CCDC150Q8NCX0 1101 aa10.45□□□□□ -0.74
CALD1-220ENST00000482470 NFE2L3Q9Y4A8 694 aa10.45□□□□□ -0.74
CALD1-220ENST00000482470 ATP1A3P13637 1013 aa10.45□□□□□ -0.74
CALD1-220ENST00000482470 ANTXR2P58335 489 aa10.45□□□□□ -0.74
CALD1-220ENST00000482470 TRIM28Q13263 835 aaKnown RBP10.45□□□□□ -0.74
CALD1-220ENST00000482470 KARSQ15046 597 aaKnown RBP10.45□□□□□ -0.74
CALD1-220ENST00000482470 TEX35Q5T0J7 233 aa10.45□□□□□ -0.74
CALD1-220ENST00000482470 FANCLQ9NW38 375 aa10.45□□□□□ -0.74
CALD1-220ENST00000482470 ARGLU1Q9NWB6 273 aaPredicted RBP10.45□□□□□ -0.74
CALD1-220ENST00000482470 SRP68Q9UHB9 627 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms