RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 ZNF512BQ96KM6 892 aaPredicted RBP24.33■■□□□ 1.49
MSH5-215ENST00000482280 MYH2Q9UKX2 1941 aa24.33■■□□□ 1.49
MSH5-215ENST00000482280 IGSF3O75054 1194 aa24.32■■□□□ 1.48
MSH5-215ENST00000482280 PLCG2P16885 1265 aa24.32■■□□□ 1.48
MSH5-215ENST00000482280 INPP5BP32019 993 aa24.32■■□□□ 1.48
MSH5-215ENST00000482280 CRHR2Q13324 411 aa24.32■■□□□ 1.48
MSH5-215ENST00000482280 TAF1CQ15572 869 aaPredicted RBP24.32■■□□□ 1.48
MSH5-215ENST00000482280 ZFYVE28Q9HCC9 887 aa24.32■■□□□ 1.48
MSH5-215ENST00000482280 PICK1Q9NRD5 415 aa24.32■■□□□ 1.48
MSH5-215ENST00000482280 DBNLQ9UJU6 430 aaKnown RBP24.32■■□□□ 1.48
MSH5-215ENST00000482280 ZFPM1Q8IX07 1006 aa24.31■■□□□ 1.48
MSH5-215ENST00000482280 CLASRPQ8N2M8 674 aaKnown RBP24.31■■□□□ 1.48
MSH5-215ENST00000482280 BRI3BPQ8WY22 251 aa24.31■■□□□ 1.48
MSH5-215ENST00000482280 ERO1AQ96HE7 468 aa24.31■■□□□ 1.48
MSH5-215ENST00000482280 AK9Q5TCS8 1911 aa24.31■■□□□ 1.48
MSH5-215ENST00000482280 APBB1O00213 710 aa24.3■■□□□ 1.48
MSH5-215ENST00000482280 IRF6O14896 467 aa24.3■■□□□ 1.48
MSH5-215ENST00000482280 PDE3AQ14432 1141 aa24.3■■□□□ 1.48
MSH5-215ENST00000482280 ARHGEF6Q15052 776 aa24.3■■□□□ 1.48
MSH5-215ENST00000482280 TEX11Q8IYF3 940 aa24.3■■□□□ 1.48
MSH5-215ENST00000482280 EAF2Q96CJ1 260 aaPredicted RBP24.3■■□□□ 1.48
MSH5-215ENST00000482280 PTPN18Q99952 460 aa24.3■■□□□ 1.48
MSH5-215ENST00000482280 BCL11AQ9H165 835 aa24.3■■□□□ 1.48
MSH5-215ENST00000482280 R3HDMLQ9H3Y0 253 aa24.3■■□□□ 1.48
MSH5-215ENST00000482280 ZBTB40Q9NUA8 1239 aa24.3■■□□□ 1.48
MSH5-215ENST00000482280 ZNF112Q9UJU3 913 aa24.3■■□□□ 1.48
MSH5-215ENST00000482280 KIF1BPQ96EK5 621 aa24.29■■□□□ 1.48
MSH5-215ENST00000482280 TLR7Q9NYK1 1049 aaKnown RBP24.29■■□□□ 1.48
MSH5-215ENST00000482280 NPM3O75607 178 aaKnown RBP24.28■■□□□ 1.48
MSH5-215ENST00000482280 CYP2E1P05181 493 aaPredicted RBP24.28■■□□□ 1.48
MSH5-215ENST00000482280 IFIT2P09913 472 aaKnown RBP24.28■■□□□ 1.48
MSH5-215ENST00000482280 ZAP70P43403 619 aa24.28■■□□□ 1.48
MSH5-215ENST00000482280 NOL9Q5SY16 702 aaKnown RBP24.28■■□□□ 1.48
MSH5-215ENST00000482280 RHPN1Q8TCX5 695 aa24.28■■□□□ 1.48
MSH5-215ENST00000482280 IL1RAPL2Q9NP60 686 aa24.28■■□□□ 1.48
MSH5-215ENST00000482280 ZCCHC17Q9NP64 241 aaKnown RBP24.28■■□□□ 1.48
MSH5-215ENST00000482280 IDH1O75874 414 aaKnown RBP24.27■■□□□ 1.48
MSH5-215ENST00000482280 RHBDL3P58872 404 aa24.27■■□□□ 1.48
MSH5-215ENST00000482280 SP3Q02447 781 aa24.27■■□□□ 1.48
MSH5-215ENST00000482280 FBXO46Q6PJ61 603 aaPredicted RBP24.27■■□□□ 1.48
MSH5-215ENST00000482280 SCYL3Q8IZE3 742 aa24.27■■□□□ 1.48
MSH5-215ENST00000482280 DDX4Q9NQI0 724 aaKnown RBP24.27■■□□□ 1.48
MSH5-215ENST00000482280 AATFQ9NY61 560 aaKnown RBP eCLIP24.27■■□□□ 1.48
MSH5-215ENST00000482280 TRIM17Q9Y577 477 aa24.27■■□□□ 1.48
MSH5-215ENST00000482280 RFX7Q2KHR2 1363 aa24.27■■□□□ 1.48
MSH5-215ENST00000482280 DDTLA6NHG4 134 aaPredicted RBP24.26■■□□□ 1.47
MSH5-215ENST00000482280 RAB11FIP3O75154 756 aa24.26■■□□□ 1.47
MSH5-215ENST00000482280 ZNF384Q8TF68 577 aa24.26■■□□□ 1.47
MSH5-215ENST00000482280 TRIM34Q9BYJ4 488 aa24.26■■□□□ 1.47
MSH5-215ENST00000482280 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.26■■□□□ 1.47
MSH5-215ENST00000482280 LAMB1P07942 1786 aa24.25■■□□□ 1.47
MSH5-215ENST00000482280 MAP3K12Q12852 859 aa24.25■■□□□ 1.47
MSH5-215ENST00000482280 CERS3Q8IU89 383 aa24.25■■□□□ 1.47
MSH5-215ENST00000482280 FAM43AQ8N2R8 423 aa24.25■■□□□ 1.47
MSH5-215ENST00000482280 OSBPL5Q9H0X9 879 aaPredicted RBP24.25■■□□□ 1.47
MSH5-215ENST00000482280 HPS5Q9UPZ3 1129 aa24.25■■□□□ 1.47
MSH5-215ENST00000482280 CTNND1O60716 968 aaKnown RBP24.24■■□□□ 1.47
MSH5-215ENST00000482280 CYP7A1P22680 504 aa24.24■■□□□ 1.47
MSH5-215ENST00000482280 KIF22Q14807 665 aa24.24■■□□□ 1.47
MSH5-215ENST00000482280 SH3BP5LQ7L8J4 393 aa24.24■■□□□ 1.47
MSH5-215ENST00000482280 SH3RF3Q8TEJ3 882 aaPredicted RBP24.24■■□□□ 1.47
MSH5-215ENST00000482280 DHX36Q9H2U1 1008 aaKnown RBP24.24■■□□□ 1.47
MSH5-215ENST00000482280 BTBD19C9JJ37 291 aa24.23■■□□□ 1.47
MSH5-215ENST00000482280 TTF1Q15361 905 aaPredicted RBP24.23■■□□□ 1.47
MSH5-215ENST00000482280 PIH1D3Q9NQM4 214 aaKnown RBP24.23■■□□□ 1.47
MSH5-215ENST00000482280 ZHX2Q9Y6X8 837 aa24.23■■□□□ 1.47
MSH5-215ENST00000482280 ATRNL1Q5VV63 1379 aa24.23■■□□□ 1.47
MSH5-215ENST00000482280 DOCK2Q92608 1830 aa24.23■■□□□ 1.47
MSH5-215ENST00000482280 CXCL11O14625 94 aa24.22■■□□□ 1.47
MSH5-215ENST00000482280 TBC1D12O60347 775 aa24.22■■□□□ 1.47
MSH5-215ENST00000482280 TMED8Q6PL24 325 aaPredicted RBP24.22■■□□□ 1.47
MSH5-215ENST00000482280 CD99L2Q8TCZ2 262 aa24.22■■□□□ 1.47
MSH5-215ENST00000482280 EFCC1Q9HA90 598 aa24.22■■□□□ 1.47
MSH5-215ENST00000482280 KCNH4Q9UQ05 1017 aa24.22■■□□□ 1.47
MSH5-215ENST00000482280 PHF20L1A8MW92 1017 aa24.21■■□□□ 1.47
MSH5-215ENST00000482280 PPP4CP60510 307 aa24.21■■□□□ 1.47
MSH5-215ENST00000482280 MAP3K10Q02779 954 aa24.21■■□□□ 1.47
MSH5-215ENST00000482280 MLLT1Q03111 559 aaPredicted RBP24.21■■□□□ 1.47
MSH5-215ENST00000482280 FASTKD5Q7L8L6 764 aaKnown RBP24.21■■□□□ 1.47
MSH5-215ENST00000482280 ANKRD23Q86SG2 305 aa24.21■■□□□ 1.47
MSH5-215ENST00000482280 CRACR2BQ8N4Y2 399 aaPredicted RBP24.21■■□□□ 1.47
MSH5-215ENST00000482280 TGFBRAP1Q8WUH2 860 aa24.21■■□□□ 1.47
MSH5-215ENST00000482280 PI4KBQ9UBF8 816 aa24.21■■□□□ 1.47
MSH5-215ENST00000482280 HERC5Q9UII4 1024 aaKnown RBP24.21■■□□□ 1.47
MSH5-215ENST00000482280 MAST2Q6P0Q8 1798 aa24.21■■□□□ 1.47
MSH5-215ENST00000482280 COL2A1P02458 1487 aaPredicted RBP24.2■■□□□ 1.47
MSH5-215ENST00000482280 TLR2O60603 784 aa24.2■■□□□ 1.46
MSH5-215ENST00000482280 PTPRAP18433 802 aa24.2■■□□□ 1.46
MSH5-215ENST00000482280 C20orf194Q5TEA3 1177 aa24.2■■□□□ 1.46
MSH5-215ENST00000482280 OTOP1Q7RTM1 612 aa24.2■■□□□ 1.46
MSH5-215ENST00000482280 MAGEB6Q8N7X4 407 aa24.2■■□□□ 1.46
MSH5-215ENST00000482280 PDHXO00330 501 aa24.19■■□□□ 1.46
MSH5-215ENST00000482280 HLA-DOAP06340 250 aa24.19■■□□□ 1.46
MSH5-215ENST00000482280 USP5P45974 858 aa24.19■■□□□ 1.46
MSH5-215ENST00000482280 MAPKAPK5Q8IW41 473 aa24.19■■□□□ 1.46
MSH5-215ENST00000482280 SIRT2Q8IXJ6 389 aa24.19■■□□□ 1.46
MSH5-215ENST00000482280 SOX10P56693 466 aa24.18■■□□□ 1.46
MSH5-215ENST00000482280 PARK7Q99497 189 aaKnown RBP24.18■■□□□ 1.46
MSH5-215ENST00000482280 DNAJC2Q99543 621 aaKnown RBP24.18■■□□□ 1.46
MSH5-215ENST00000482280 GADL1Q6ZQY3 521 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms