RNA–Protein interactions for RNA: ENST00000482270.5

LIMK2-209, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-209ENST00000482270 PHACTR3Q96KR7 559 aa11.87□□□□□ -0.51
LIMK2-209ENST00000482270 C2orf49Q9BVC5 232 aaPredicted RBP11.87□□□□□ -0.51
LIMK2-209ENST00000482270 AFDNP55196 1824 aaKnown RBP11.87□□□□□ -0.51
LIMK2-209ENST00000482270 BRCA1P38398 1863 aaKnown RBP11.87□□□□□ -0.51
LIMK2-209ENST00000482270 ATXN7O15265 892 aaPredicted RBP11.86□□□□□ -0.51
LIMK2-209ENST00000482270 BNIP3LO60238 219 aa11.86□□□□□ -0.51
LIMK2-209ENST00000482270 MMP10P09238 476 aa11.86□□□□□ -0.51
LIMK2-209ENST00000482270 U2AF1L5P0DN76 240 aaPredicted RBP11.86□□□□□ -0.51
LIMK2-209ENST00000482270 U2AF1Q01081 240 aaKnown RBP eCLIP11.86□□□□□ -0.51
LIMK2-209ENST00000482270 LBRQ14739 615 aaKnown RBP11.86□□□□□ -0.51
LIMK2-209ENST00000482270 ALDH16A1Q8IZ83 802 aa11.86□□□□□ -0.51
LIMK2-209ENST00000482270 MBIPQ9NS73 344 aa11.86□□□□□ -0.51
LIMK2-209ENST00000482270 SRP68Q9UHB9 627 aaKnown RBP11.86□□□□□ -0.51
LIMK2-209ENST00000482270 PHF24Q9UPV7 400 aa11.86□□□□□ -0.51
LIMK2-209ENST00000482270 GNAT3A8MTJ3 354 aa11.85□□□□□ -0.51
LIMK2-209ENST00000482270 RPS6KA4O75676 772 aa11.85□□□□□ -0.51
LIMK2-209ENST00000482270 IGFBP4P22692 258 aa11.85□□□□□ -0.51
LIMK2-209ENST00000482270 RFC4P35249 363 aa11.85□□□□□ -0.51
LIMK2-209ENST00000482270 FIGNL1Q6PIW4 674 aa11.85□□□□□ -0.51
LIMK2-209ENST00000482270 IL17REQ8NFR9 667 aa11.85□□□□□ -0.51
LIMK2-209ENST00000482270 MKNK1Q9BUB5 465 aa11.85□□□□□ -0.51
LIMK2-209ENST00000482270 GYS1P13807 737 aa11.84□□□□□ -0.51
LIMK2-209ENST00000482270 TEFQ10587 303 aa11.84□□□□□ -0.51
LIMK2-209ENST00000482270 ELOAQ14241 798 aaKnown RBP11.84□□□□□ -0.51
LIMK2-209ENST00000482270 INTS5Q6P9B9 1019 aaKnown RBP11.84□□□□□ -0.51
LIMK2-209ENST00000482270 NLRP8Q86W28 1048 aa11.84□□□□□ -0.51
LIMK2-209ENST00000482270 WHAMMQ8TF30 809 aa11.84□□□□□ -0.51
LIMK2-209ENST00000482270 NUDCQ9Y266 331 aa11.84□□□□□ -0.51
LIMK2-209ENST00000482270 PCDHGC4Q9Y5F7 938 aa11.84□□□□□ -0.51
LIMK2-209ENST00000482270 CD2APQ9Y5K6 639 aa11.84□□□□□ -0.51
LIMK2-209ENST00000482270 CD33P20138 364 aa11.83□□□□□ -0.52
LIMK2-209ENST00000482270 FGFR3P22607 806 aa11.83□□□□□ -0.52
LIMK2-209ENST00000482270 LORP23490 312 aaPredicted RBP11.83□□□□□ -0.52
LIMK2-209ENST00000482270 SVOPQ8N4V2 548 aa11.83□□□□□ -0.52
LIMK2-209ENST00000482270 CCDC87Q9NVE4 849 aa11.83□□□□□ -0.52
LIMK2-209ENST00000482270 ATXN7L1Q9ULK2 861 aaPredicted RBP11.83□□□□□ -0.52
LIMK2-209ENST00000482270 UTRNP46939 3433 aa11.82□□□□□ -0.52
LIMK2-209ENST00000482270 SCN7AQ01118 1682 aa11.82□□□□□ -0.52
LIMK2-209ENST00000482270 CYP19A1P11511 503 aaPredicted RBP11.82□□□□□ -0.52
LIMK2-209ENST00000482270 WEE1P30291 646 aa11.82□□□□□ -0.52
LIMK2-209ENST00000482270 FKBP5Q13451 457 aaPredicted RBP11.82□□□□□ -0.52
LIMK2-209ENST00000482270 TTC5Q8N0Z6 440 aa11.82□□□□□ -0.52
LIMK2-209ENST00000482270 ZNF280CQ8ND82 737 aa11.82□□□□□ -0.52
LIMK2-209ENST00000482270 ZBTB1Q9Y2K1 713 aa11.82□□□□□ -0.52
LIMK2-209ENST00000482270 PXDNLA1KZ92 1463 aa11.82□□□□□ -0.52
LIMK2-209ENST00000482270 LAMB4A4D0S4 1761 aa11.82□□□□□ -0.52
LIMK2-209ENST00000482270 KDM3BQ7LBC6 1761 aa11.82□□□□□ -0.52
LIMK2-209ENST00000482270 GOLGB1Q14789 3259 aaKnown RBP11.81□□□□□ -0.52
LIMK2-209ENST00000482270 CACNA1SQ13698 1873 aa11.81□□□□□ -0.52
LIMK2-209ENST00000482270 C10orf71Q711Q0 1435 aa11.81□□□□□ -0.52
LIMK2-209ENST00000482270 CARNS1A5YM72 827 aa11.81□□□□□ -0.52
LIMK2-209ENST00000482270 KCNQ3O43525 872 aa11.81□□□□□ -0.52
LIMK2-209ENST00000482270 BMP4P12644 408 aa11.81□□□□□ -0.52
LIMK2-209ENST00000482270 CANXP27824 592 aaKnown RBP11.81□□□□□ -0.52
LIMK2-209ENST00000482270 DCTN1Q14203 1278 aa11.81□□□□□ -0.52
LIMK2-209ENST00000482270 SWI5Q1ZZU3 235 aa11.81□□□□□ -0.52
LIMK2-209ENST00000482270 MCM10Q7L590 875 aa11.81□□□□□ -0.52
LIMK2-209ENST00000482270 NLGN1Q8N2Q7 840 aa11.81□□□□□ -0.52
LIMK2-209ENST00000482270 ZNF496Q96IT1 587 aaPredicted RBP11.81□□□□□ -0.52
LIMK2-209ENST00000482270 CFHR5Q9BXR6 569 aa11.81□□□□□ -0.52
LIMK2-209ENST00000482270 BCORQ6W2J9 1755 aa11.81□□□□□ -0.52
LIMK2-209ENST00000482270 SOS1Q07889 1333 aaPredicted RBP11.81□□□□□ -0.52
LIMK2-209ENST00000482270 USP42Q9H9J4 1324 aaKnown RBP11.81□□□□□ -0.52
LIMK2-209ENST00000482270 ARFGEF1Q9Y6D6 1849 aa11.81□□□□□ -0.52
LIMK2-209ENST00000482270 COL15A1P39059 1388 aa11.8□□□□□ -0.52
LIMK2-209ENST00000482270 MAPTP10636 758 aaKnown RBP11.8□□□□□ -0.52
LIMK2-209ENST00000482270 HIRAP54198 1017 aaPredicted RBP11.8□□□□□ -0.52
LIMK2-209ENST00000482270 CTBSQ01459 385 aa11.8□□□□□ -0.52
LIMK2-209ENST00000482270 SRSF11Q05519 484 aaKnown RBP11.8□□□□□ -0.52
LIMK2-209ENST00000482270 USPL1Q5W0Q7 1092 aa11.8□□□□□ -0.52
LIMK2-209ENST00000482270 CEMIPQ8WUJ3 1361 aa11.79□□□□□ -0.52
LIMK2-209ENST00000482270 HEG1Q9ULI3 1381 aa11.79□□□□□ -0.52
LIMK2-209ENST00000482270 DLEC1Q9Y238 1755 aa11.79□□□□□ -0.52
LIMK2-209ENST00000482270 ANKRD31Q8N7Z5 1873 aa11.79□□□□□ -0.52
LIMK2-209ENST00000482270 DDR1Q08345 913 aa11.79□□□□□ -0.52
LIMK2-209ENST00000482270 C1orf53Q5VUE5 145 aa11.79□□□□□ -0.52
LIMK2-209ENST00000482270 ZNF790Q6PG37 636 aa11.79□□□□□ -0.52
LIMK2-209ENST00000482270 SUSD3Q96L08 255 aa11.79□□□□□ -0.52
LIMK2-209ENST00000482270 NDFIP2Q9NV92 336 aa11.79□□□□□ -0.52
LIMK2-209ENST00000482270 KLK14Q9P0G3 267 aa11.79□□□□□ -0.52
LIMK2-209ENST00000482270 NRXN2Q9P2S2 1712 aa11.79□□□□□ -0.52
LIMK2-209ENST00000482270 A0A0G2JLW4 131 aa11.78□□□□□ -0.52
LIMK2-209ENST00000482270 BTBD11A6QL63 1104 aa11.78□□□□□ -0.52
LIMK2-209ENST00000482270 ZNF385CQ66K41 422 aaPredicted RBP11.78□□□□□ -0.52
LIMK2-209ENST00000482270 STAG2Q8N3U4 1231 aa11.78□□□□□ -0.52
LIMK2-209ENST00000482270 RTF1Q92541 710 aaKnown RBP11.78□□□□□ -0.52
LIMK2-209ENST00000482270 CEP63Q96MT8 703 aa11.78□□□□□ -0.52
LIMK2-209ENST00000482270 HCN2Q9UL51 889 aa11.78□□□□□ -0.52
LIMK2-209ENST00000482270 NSFL1CQ9UNZ2 370 aaKnown RBP11.78□□□□□ -0.52
LIMK2-209ENST00000482270 PRAMEF22A3QJZ6 481 aa11.77□□□□□ -0.53
LIMK2-209ENST00000482270 GRIN3BO60391 1043 aa11.77□□□□□ -0.53
LIMK2-209ENST00000482270 PIP4K2AP48426 406 aaPredicted RBP11.77□□□□□ -0.53
LIMK2-209ENST00000482270 TNP2Q05952 138 aa11.77□□□□□ -0.53
LIMK2-209ENST00000482270 GRIN2CQ14957 1233 aa11.77□□□□□ -0.53
LIMK2-209ENST00000482270 RALBP1Q15311 655 aa11.77□□□□□ -0.53
LIMK2-209ENST00000482270 OCLNQ16625 522 aa11.77□□□□□ -0.53
LIMK2-209ENST00000482270 LYPD4Q6UWN0 246 aa11.77□□□□□ -0.53
LIMK2-209ENST00000482270 C7orf43Q8WVR3 580 aa11.77□□□□□ -0.53
LIMK2-209ENST00000482270 PRKRIP1Q9H875 184 aaPredicted RBP11.77□□□□□ -0.53
LIMK2-209ENST00000482270 CCDC88AQ3V6T2 1871 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms