RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 EP400Q96L91 3159 aa13.72□□□□□ -0.21
GGPS1-205ENST00000482013 MINDY4BA8MYZ0 360 aa13.72□□□□□ -0.21
GGPS1-205ENST00000482013 USP17L12C9JPN9 530 aa13.72□□□□□ -0.21
GGPS1-205ENST00000482013 USP17L21D6R901 530 aa13.72□□□□□ -0.21
GGPS1-205ENST00000482013 IFIT3O14879 490 aaKnown RBP13.72□□□□□ -0.21
GGPS1-205ENST00000482013 KDM4AO75164 1064 aa13.72□□□□□ -0.21
GGPS1-205ENST00000482013 GSE1Q14687 1217 aa13.72□□□□□ -0.21
GGPS1-205ENST00000482013 PPP2R5BQ15173 497 aa13.72□□□□□ -0.21
GGPS1-205ENST00000482013 TMEM67Q5HYA8 995 aa13.72□□□□□ -0.21
GGPS1-205ENST00000482013 SYNE3Q6ZMZ3 975 aa13.72□□□□□ -0.21
GGPS1-205ENST00000482013 SLC51AQ86UW1 340 aa13.72□□□□□ -0.21
GGPS1-205ENST00000482013 AMOTL1Q8IY63 956 aa13.72□□□□□ -0.21
GGPS1-205ENST00000482013 TMEM87AQ8NBN3 555 aa13.72□□□□□ -0.21
GGPS1-205ENST00000482013 C7orf43Q8WVR3 580 aa13.72□□□□□ -0.21
GGPS1-205ENST00000482013 MRIQ9BWK5 157 aa13.72□□□□□ -0.21
GGPS1-205ENST00000482013 LY9Q9HBG7 655 aa13.72□□□□□ -0.21
GGPS1-205ENST00000482013 MKRN1Q9UHC7 482 aaKnown RBP13.72□□□□□ -0.21
GGPS1-205ENST00000482013 HPS5Q9UPZ3 1129 aa13.72□□□□□ -0.21
GGPS1-205ENST00000482013 TACC3Q9Y6A5 838 aa13.72□□□□□ -0.21
GGPS1-205ENST00000482013 TCHHQ07283 1943 aa13.71□□□□□ -0.21
GGPS1-205ENST00000482013 PTPDC1A2A3K4 754 aa13.71□□□□□ -0.21
GGPS1-205ENST00000482013 GOLGA8BA8MQT2 603 aa13.71□□□□□ -0.21
GGPS1-205ENST00000482013 G3V3G9 751 aa13.71□□□□□ -0.21
GGPS1-205ENST00000482013 RIMBP2O15034 1052 aa13.71□□□□□ -0.21
GGPS1-205ENST00000482013 CDKL5O76039 1030 aa13.71□□□□□ -0.21
GGPS1-205ENST00000482013 CTDNEP1O95476 244 aa13.71□□□□□ -0.21
GGPS1-205ENST00000482013 USP5P45974 858 aa13.71□□□□□ -0.21
GGPS1-205ENST00000482013 GTF2IP78347 998 aa13.71□□□□□ -0.21
GGPS1-205ENST00000482013 CCT2P78371 535 aaKnown RBP13.71□□□□□ -0.21
GGPS1-205ENST00000482013 KLHL40Q2TBA0 621 aa13.71□□□□□ -0.21
GGPS1-205ENST00000482013 DCAF8Q5TAQ9 597 aa13.71□□□□□ -0.21
GGPS1-205ENST00000482013 CPLX2Q6PUV4 134 aaKnown RBP13.71□□□□□ -0.21
GGPS1-205ENST00000482013 APOA5Q6Q788 366 aa13.71□□□□□ -0.21
GGPS1-205ENST00000482013 ZSCAN16Q9H4T2 348 aaPredicted RBP13.71□□□□□ -0.21
GGPS1-205ENST00000482013 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.71□□□□□ -0.21
GGPS1-205ENST00000482013 CDK5RAP2Q96SN8 1893 aa13.71□□□□□ -0.21
GGPS1-205ENST00000482013 FOCADQ5VW36 1801 aa13.71□□□□□ -0.22
GGPS1-205ENST00000482013 NAV1Q8NEY1 1877 aa13.7□□□□□ -0.22
GGPS1-205ENST00000482013 VPS37CA5D8V6 355 aaPredicted RBP13.7□□□□□ -0.22
GGPS1-205ENST00000482013 CCDC69A6NI79 296 aa13.7□□□□□ -0.22
GGPS1-205ENST00000482013 CPLX1O14810 134 aa13.7□□□□□ -0.22
GGPS1-205ENST00000482013 ZBTB43O43298 467 aa13.7□□□□□ -0.22
GGPS1-205ENST00000482013 PDE4BQ07343 736 aa13.7□□□□□ -0.22
GGPS1-205ENST00000482013 WTAPQ15007 396 aa13.7□□□□□ -0.22
GGPS1-205ENST00000482013 CCDC178Q5BJE1 867 aa13.7□□□□□ -0.22
GGPS1-205ENST00000482013 C12orf60Q5U649 245 aa13.7□□□□□ -0.22
GGPS1-205ENST00000482013 UBAC1Q9BSL1 405 aa13.7□□□□□ -0.22
GGPS1-205ENST00000482013 VPS33BQ9H267 617 aa13.7□□□□□ -0.22
GGPS1-205ENST00000482013 GPHNQ9NQX3 736 aaPredicted RBP13.7□□□□□ -0.22
GGPS1-205ENST00000482013 TOMM22Q9NS69 142 aa13.7□□□□□ -0.22
GGPS1-205ENST00000482013 NAP1L2Q9ULW6 460 aaPredicted RBP13.7□□□□□ -0.22
GGPS1-205ENST00000482013 JAG2Q9Y219 1238 aa13.7□□□□□ -0.22
GGPS1-205ENST00000482013 ROBO3Q96MS0 1386 aa13.7□□□□□ -0.22
GGPS1-205ENST00000482013 JAK2O60674 1132 aa13.69□□□□□ -0.22
GGPS1-205ENST00000482013 MBD3O95983 291 aa13.69□□□□□ -0.22
GGPS1-205ENST00000482013 NCLP19338 710 aaKnown RBP13.69□□□□□ -0.22
GGPS1-205ENST00000482013 BTDP43251 543 aa13.69□□□□□ -0.22
GGPS1-205ENST00000482013 METAP2P50579 478 aaKnown RBP eCLIP13.69□□□□□ -0.22
GGPS1-205ENST00000482013 HDLBPQ00341 1268 aaKnown RBP13.69□□□□□ -0.22
GGPS1-205ENST00000482013 GRIK5Q16478 980 aa13.69□□□□□ -0.22
GGPS1-205ENST00000482013 FOXD4L5Q5VV16 416 aaPredicted RBP13.69□□□□□ -0.22
GGPS1-205ENST00000482013 HHIPL2Q6UWX4 724 aa13.69□□□□□ -0.22
GGPS1-205ENST00000482013 NFXL1Q6ZNB6 911 aa13.69□□□□□ -0.22
GGPS1-205ENST00000482013 IQCA1Q86XH1 822 aa13.69□□□□□ -0.22
GGPS1-205ENST00000482013 RTKN2Q8IZC4 609 aa13.69□□□□□ -0.22
GGPS1-205ENST00000482013 SH3RF3Q8TEJ3 882 aaPredicted RBP13.69□□□□□ -0.22
GGPS1-205ENST00000482013 FOXD4L4Q8WXT5 416 aaPredicted RBP13.69□□□□□ -0.22
GGPS1-205ENST00000482013 ZNF287Q9HBT7 754 aa13.69□□□□□ -0.22
GGPS1-205ENST00000482013 SLC12A7Q9Y666 1083 aa13.69□□□□□ -0.22
GGPS1-205ENST00000482013 DDX49Q9Y6V7 483 aaKnown RBP13.69□□□□□ -0.22
GGPS1-205ENST00000482013 SNED1Q8TER0 1413 aa13.69□□□□□ -0.22
GGPS1-205ENST00000482013 CCDC196A0A1B0GTZ2 297 aa13.68□□□□□ -0.22
GGPS1-205ENST00000482013 H3BQV1 296 aa13.68□□□□□ -0.22
GGPS1-205ENST00000482013 SOCS7O14512 581 aa13.68□□□□□ -0.22
GGPS1-205ENST00000482013 PRPF40AO75400 957 aaKnown RBP13.68□□□□□ -0.22
GGPS1-205ENST00000482013 CHRNA5P30532 468 aa13.68□□□□□ -0.22
GGPS1-205ENST00000482013 SEC23AQ15436 765 aa13.68□□□□□ -0.22
GGPS1-205ENST00000482013 DIXDC1Q155Q3 683 aa13.68□□□□□ -0.22
GGPS1-205ENST00000482013 RRP12Q5JTH9 1297 aaKnown RBP13.68□□□□□ -0.22
GGPS1-205ENST00000482013 IFFO2Q5TF58 517 aa13.68□□□□□ -0.22
GGPS1-205ENST00000482013 STRIP1Q5VSL9 837 aa13.68□□□□□ -0.22
GGPS1-205ENST00000482013 ATL3Q6DD88 541 aa13.68□□□□□ -0.22
GGPS1-205ENST00000482013 TTLL6Q8N841 843 aa13.68□□□□□ -0.22
GGPS1-205ENST00000482013 NCOA5Q9HCD5 579 aaKnown RBP13.68□□□□□ -0.22
GGPS1-205ENST00000482013 INCENPQ9NQS7 918 aa13.68□□□□□ -0.22
GGPS1-205ENST00000482013 MCM9Q9NXL9 1143 aa13.68□□□□□ -0.22
GGPS1-205ENST00000482013 ISY1Q9ULR0 285 aaKnown RBP13.68□□□□□ -0.22
GGPS1-205ENST00000482013 MYH1P12882 1939 aa13.67□□□□□ -0.22
GGPS1-205ENST00000482013 GOLGA8AA7E2F4 631 aa13.67□□□□□ -0.22
GGPS1-205ENST00000482013 CALM1P0DP23 149 aa13.67□□□□□ -0.22
GGPS1-205ENST00000482013 CALM2P0DP24 149 aa13.67□□□□□ -0.22
GGPS1-205ENST00000482013 CALM3P0DP25 149 aa13.67□□□□□ -0.22
GGPS1-205ENST00000482013 RHBDL3P58872 404 aa13.67□□□□□ -0.22
GGPS1-205ENST00000482013 TGFB2P61812 414 aa13.67□□□□□ -0.22
GGPS1-205ENST00000482013 KIAA2012Q0VF49 1180 aa13.67□□□□□ -0.22
GGPS1-205ENST00000482013 SOGA3Q5TF21 947 aa13.67□□□□□ -0.22
GGPS1-205ENST00000482013 OLFM4Q6UX06 510 aa13.67□□□□□ -0.22
GGPS1-205ENST00000482013 CDC37L1Q7L3B6 337 aa13.67□□□□□ -0.22
GGPS1-205ENST00000482013 KLHL34Q8N239 644 aa13.67□□□□□ -0.22
GGPS1-205ENST00000482013 NKX2-3Q8TAU0 364 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms