RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 DDX4Q9NQI0 724 aaKnown RBP24.81■■□□□ 1.56
VPS16-207ENST00000481812 FLT1P17948 1338 aa24.81■■□□□ 1.56
VPS16-207ENST00000481812 CNTNAP1P78357 1384 aa24.8■■□□□ 1.56
VPS16-207ENST00000481812 TCP10L2B9ZVM9 353 aa24.8■■□□□ 1.56
VPS16-207ENST00000481812 KIF3CO14782 793 aa24.8■■□□□ 1.56
VPS16-207ENST00000481812 CACNB3P54284 484 aa24.8■■□□□ 1.56
VPS16-207ENST00000481812 ZNF784Q8NCA9 323 aaPredicted RBP24.8■■□□□ 1.56
VPS16-207ENST00000481812 SDR42E1Q8WUS8 393 aa24.8■■□□□ 1.56
VPS16-207ENST00000481812 NACAP1Q9BZK3 213 aa24.8■■□□□ 1.56
VPS16-207ENST00000481812 CLEC11AQ9Y240 323 aa24.8■■□□□ 1.56
VPS16-207ENST00000481812 BAZ2AQ9UIF9 1905 aaKnown RBP24.8■■□□□ 1.56
VPS16-207ENST00000481812 DDX60LQ5H9U9 1706 aaKnown RBP24.8■■□□□ 1.56
VPS16-207ENST00000481812 ZMYM6O95789 1325 aa24.8■■□□□ 1.56
VPS16-207ENST00000481812 MAPKAPK5Q8IW41 473 aa24.79■■□□□ 1.56
VPS16-207ENST00000481812 OSBPL5Q9H0X9 879 aaPredicted RBP24.79■■□□□ 1.56
VPS16-207ENST00000481812 ATRNL1Q5VV63 1379 aa24.79■■□□□ 1.56
VPS16-207ENST00000481812 FOXP2O15409 715 aa24.78■■□□□ 1.56
VPS16-207ENST00000481812 EPB41L2O43491 1005 aaKnown RBP24.78■■□□□ 1.56
VPS16-207ENST00000481812 POTEIP0CG38 1075 aa24.78■■□□□ 1.56
VPS16-207ENST00000481812 POTEJP0CG39 1038 aa24.78■■□□□ 1.56
VPS16-207ENST00000481812 RASA3Q14644 834 aa24.78■■□□□ 1.56
VPS16-207ENST00000481812 VPS53Q5VIR6 699 aa24.78■■□□□ 1.56
VPS16-207ENST00000481812 KIAA1211Q6ZU35 1233 aa24.78■■□□□ 1.56
VPS16-207ENST00000481812 CDC37L1Q7L3B6 337 aa24.78■■□□□ 1.56
VPS16-207ENST00000481812 SULF1Q8IWU6 871 aa24.78■■□□□ 1.56
VPS16-207ENST00000481812 IFNL3Q8IZI9 196 aa24.78■■□□□ 1.56
VPS16-207ENST00000481812 DEFB129Q9H1M3 183 aa24.78■■□□□ 1.56
VPS16-207ENST00000481812 DHX36Q9H2U1 1008 aaKnown RBP24.78■■□□□ 1.56
VPS16-207ENST00000481812 PICALMQ13492 652 aa24.77■■□□□ 1.56
VPS16-207ENST00000481812 C8orf34Q49A92 452 aa24.77■■□□□ 1.56
VPS16-207ENST00000481812 SBK1Q52WX2 424 aa24.77■■□□□ 1.56
VPS16-207ENST00000481812 KRT26Q7Z3Y9 468 aa24.77■■□□□ 1.56
VPS16-207ENST00000481812 EPB41L4AQ9HCS5 686 aaPredicted RBP24.77■■□□□ 1.56
VPS16-207ENST00000481812 REC8O95072 547 aa24.76■■□□□ 1.55
VPS16-207ENST00000481812 APPP05067 770 aa24.76■■□□□ 1.55
VPS16-207ENST00000481812 TCP10Q12799 353 aa24.76■■□□□ 1.55
VPS16-207ENST00000481812 MAP4K1Q92918 833 aa24.76■■□□□ 1.55
VPS16-207ENST00000481812 TAOK2Q9UL54 1235 aa24.76■■□□□ 1.55
VPS16-207ENST00000481812 CHADLQ6NUI6 762 aa24.75■■□□□ 1.55
VPS16-207ENST00000481812 LSG1Q9H089 658 aaKnown RBP24.75■■□□□ 1.55
VPS16-207ENST00000481812 NAPBQ9H115 298 aa24.75■■□□□ 1.55
VPS16-207ENST00000481812 MCM9Q9NXL9 1143 aa24.75■■□□□ 1.55
VPS16-207ENST00000481812 ARPP21Q9UBL0 812 aaPredicted RBP24.75■■□□□ 1.55
VPS16-207ENST00000481812 FGAP02671 866 aa24.74■■□□□ 1.55
VPS16-207ENST00000481812 TDO2P48775 406 aa24.74■■□□□ 1.55
VPS16-207ENST00000481812 PTH1RQ03431 593 aa24.74■■□□□ 1.55
VPS16-207ENST00000481812 TTC6Q86TZ1 520 aa24.74■■□□□ 1.55
VPS16-207ENST00000481812 ZFPM1Q8IX07 1006 aa24.74■■□□□ 1.55
VPS16-207ENST00000481812 AMOTL1Q8IY63 956 aa24.74■■□□□ 1.55
VPS16-207ENST00000481812 TEPSINQ96N21 525 aa24.74■■□□□ 1.55
VPS16-207ENST00000481812 CTNNA3Q9UI47 895 aa24.74■■□□□ 1.55
VPS16-207ENST00000481812 LAMB1P07942 1786 aa24.73■■□□□ 1.55
VPS16-207ENST00000481812 CTR9Q6PD62 1173 aa24.73■■□□□ 1.55
VPS16-207ENST00000481812 SH3BP5LQ7L8J4 393 aa24.73■■□□□ 1.55
VPS16-207ENST00000481812 HOOK2Q96ED9 719 aa24.73■■□□□ 1.55
VPS16-207ENST00000481812 TMEM39BQ9GZU3 492 aa24.73■■□□□ 1.55
VPS16-207ENST00000481812 ANO2Q9NQ90 1003 aa24.73■■□□□ 1.55
VPS16-207ENST00000481812 U3KPZ7 1027 aaPredicted RBP24.73■■□□□ 1.55
VPS16-207ENST00000481812 DDTLA6NHG4 134 aaPredicted RBP24.72■■□□□ 1.55
VPS16-207ENST00000481812 USP17L12C9JPN9 530 aa24.72■■□□□ 1.55
VPS16-207ENST00000481812 USP17L21D6R901 530 aa24.72■■□□□ 1.55
VPS16-207ENST00000481812 TOMM70O94826 608 aa24.72■■□□□ 1.55
VPS16-207ENST00000481812 C12orf60Q5U649 245 aa24.72■■□□□ 1.55
VPS16-207ENST00000481812 MAP1SQ66K74 1059 aaPredicted RBP24.72■■□□□ 1.55
VPS16-207ENST00000481812 USP48Q86UV5 1035 aa24.72■■□□□ 1.55
VPS16-207ENST00000481812 RBM46Q8TBY0 533 aaKnown RBP24.72■■□□□ 1.55
VPS16-207ENST00000481812 PI4KBQ9UBF8 816 aa24.72■■□□□ 1.55
VPS16-207ENST00000481812 PALD1Q9ULE6 856 aa24.72■■□□□ 1.55
VPS16-207ENST00000481812 LAMA4Q16363 1823 aa24.71■■□□□ 1.55
VPS16-207ENST00000481812 POLR3DP05423 398 aaPredicted RBP24.71■■□□□ 1.55
VPS16-207ENST00000481812 HLA-DOAP06340 250 aa24.71■■□□□ 1.55
VPS16-207ENST00000481812 SUPT20HL1Q3ZLR7 823 aa24.71■■□□□ 1.55
VPS16-207ENST00000481812 METTL16Q86W50 562 aaKnown RBP24.71■■□□□ 1.55
VPS16-207ENST00000481812 FOXP4Q8IVH2 680 aaPredicted RBP24.71■■□□□ 1.55
VPS16-207ENST00000481812 ZSCAN29Q8IWY8 852 aaPredicted RBP24.71■■□□□ 1.55
VPS16-207ENST00000481812 GLIS2Q9BZE0 524 aaPredicted RBP24.71■■□□□ 1.55
VPS16-207ENST00000481812 EHD4Q9H223 541 aa24.71■■□□□ 1.55
VPS16-207ENST00000481812 SAP30BPQ9UHR5 308 aaKnown RBP24.71■■□□□ 1.55
VPS16-207ENST00000481812 SIPA1L1O43166 1804 aa24.7■■□□□ 1.55
VPS16-207ENST00000481812 ADM5C9JUS6 153 aa24.7■■□□□ 1.54
VPS16-207ENST00000481812 MAP3K10Q02779 954 aa24.7■■□□□ 1.54
VPS16-207ENST00000481812 CSRNP1Q96S65 589 aa24.7■■□□□ 1.54
VPS16-207ENST00000481812 ANAPC4Q9UJX5 808 aa24.7■■□□□ 1.54
VPS16-207ENST00000481812 SCAF8Q9UPN6 1271 aaKnown RBP24.7■■□□□ 1.54
VPS16-207ENST00000481812 TBC1D12O60347 775 aa24.69■■□□□ 1.54
VPS16-207ENST00000481812 SMC1BQ8NDV3 1235 aa24.69■■□□□ 1.54
VPS16-207ENST00000481812 ROBO3Q96MS0 1386 aa24.68■■□□□ 1.54
VPS16-207ENST00000481812 ITGBL1O95965 494 aaPredicted RBP24.68■■□□□ 1.54
VPS16-207ENST00000481812 PLCD1P51178 756 aa24.68■■□□□ 1.54
VPS16-207ENST00000481812 NBPF12Q5TAG4 269 aaPredicted RBP24.68■■□□□ 1.54
VPS16-207ENST00000481812 HERC5Q9UII4 1024 aaKnown RBP24.68■■□□□ 1.54
VPS16-207ENST00000481812 RBM8AQ9Y5S9 174 aaKnown RBP24.68■■□□□ 1.54
VPS16-207ENST00000481812 TRPM7Q96QT4 1865 aa24.68■■□□□ 1.54
VPS16-207ENST00000481812 GABPAQ06546 454 aa24.67■■□□□ 1.54
VPS16-207ENST00000481812 NECTIN1Q15223 517 aa24.67■■□□□ 1.54
VPS16-207ENST00000481812 CDCA5Q96FF9 252 aa24.67■■□□□ 1.54
VPS16-207ENST00000481812 USP26Q9BXU7 913 aa24.67■■□□□ 1.54
VPS16-207ENST00000481812 SERPINB13Q9UIV8 391 aa24.67■■□□□ 1.54
VPS16-207ENST00000481812 NF2P35240 595 aa24.66■■□□□ 1.54
VPS16-207ENST00000481812 PPARAQ07869 468 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms