RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 LCE3BQ5TA77 95 aa6.28□□□□□ -1.4
CBX3-207ENST00000481300 SEZ6L2Q6UXD5 910 aa6.28□□□□□ -1.4
CBX3-207ENST00000481300 DDX54Q8TDD1 881 aaKnown RBP6.28□□□□□ -1.4
CBX3-207ENST00000481300 METTL22Q9BUU2 404 aaPredicted RBP6.28□□□□□ -1.4
CBX3-207ENST00000481300 PPP1R9AQ9ULJ8 1098 aa6.28□□□□□ -1.4
CBX3-207ENST00000481300 TTF2Q9UNY4 1162 aaKnown RBP6.28□□□□□ -1.4
CBX3-207ENST00000481300 PRNPP04156 253 aa6.27□□□□□ -1.41
CBX3-207ENST00000481300 ASPAP45381 313 aa6.27□□□□□ -1.41
CBX3-207ENST00000481300 ZNF157P51786 506 aaPredicted RBP6.27□□□□□ -1.41
CBX3-207ENST00000481300 AP3B2Q13367 1082 aa6.27□□□□□ -1.41
CBX3-207ENST00000481300 MAP7Q14244 749 aa6.27□□□□□ -1.41
CBX3-207ENST00000481300 PDE3AQ14432 1141 aa6.27□□□□□ -1.41
CBX3-207ENST00000481300 RPS26P11Q5JNZ5 115 aaPredicted RBP6.27□□□□□ -1.41
CBX3-207ENST00000481300 ABI1Q8IZP0 508 aa6.27□□□□□ -1.41
CBX3-207ENST00000481300 WDR89Q96FK6 387 aaPredicted RBP6.27□□□□□ -1.41
CBX3-207ENST00000481300 CCDC86Q9H6F5 360 aaKnown RBP6.27□□□□□ -1.41
CBX3-207ENST00000481300 C1GALT1Q9NS00 363 aa6.27□□□□□ -1.41
CBX3-207ENST00000481300 CCDC39Q9UFE4 941 aa6.27□□□□□ -1.41
CBX3-207ENST00000481300 ADGRE2Q9UHX3 823 aa6.27□□□□□ -1.41
CBX3-207ENST00000481300 PPM1HQ9ULR3 514 aa6.27□□□□□ -1.41
CBX3-207ENST00000481300 SCAMP3O14828 347 aaKnown RBP6.26□□□□□ -1.41
CBX3-207ENST00000481300 CYP26A1O43174 497 aa6.26□□□□□ -1.41
CBX3-207ENST00000481300 PAX4O43316 350 aa6.26□□□□□ -1.41
CBX3-207ENST00000481300 CTSHP09668 335 aa6.26□□□□□ -1.41
CBX3-207ENST00000481300 TAF1CQ15572 869 aaPredicted RBP6.26□□□□□ -1.41
CBX3-207ENST00000481300 ZNF765Q7L2R6 523 aa6.26□□□□□ -1.41
CBX3-207ENST00000481300 FMNL2Q96PY5 1086 aa6.26□□□□□ -1.41
CBX3-207ENST00000481300 SYNGAP1Q96PV0 1343 aa6.25□□□□□ -1.41
CBX3-207ENST00000481300 ZNF862O60290 1169 aa6.25□□□□□ -1.41
CBX3-207ENST00000481300 TCF3P15923 654 aa6.25□□□□□ -1.41
CBX3-207ENST00000481300 LIG1P18858 919 aa6.25□□□□□ -1.41
CBX3-207ENST00000481300 ST13P50502 369 aaKnown RBP6.25□□□□□ -1.41
CBX3-207ENST00000481300 MEI1Q5TIA1 1274 aa6.25□□□□□ -1.41
CBX3-207ENST00000481300 C3orf58Q8NDZ4 430 aa6.25□□□□□ -1.41
CBX3-207ENST00000481300 ZC3H12CQ9C0D7 883 aaKnown RBP6.25□□□□□ -1.41
CBX3-207ENST00000481300 CEP44Q9C0F1 390 aa6.25□□□□□ -1.41
CBX3-207ENST00000481300 GOLGA2P5Q9HBQ8 144 aa6.25□□□□□ -1.41
CBX3-207ENST00000481300 ANGEL1Q9UNK9 670 aaKnown RBP6.25□□□□□ -1.41
CBX3-207ENST00000481300 USP31Q70CQ4 1352 aa6.24□□□□□ -1.41
CBX3-207ENST00000481300 TMPRSS2O15393 492 aa6.24□□□□□ -1.41
CBX3-207ENST00000481300 ZNF76P36508 570 aa6.24□□□□□ -1.41
CBX3-207ENST00000481300 CCDC85BQ15834 202 aaPredicted RBP6.24□□□□□ -1.41
CBX3-207ENST00000481300 TPTE2Q6XPS3 522 aa6.24□□□□□ -1.41
CBX3-207ENST00000481300 VSIG10LQ86VR7 867 aa6.24□□□□□ -1.41
CBX3-207ENST00000481300 LGR6Q9HBX8 967 aa6.24□□□□□ -1.41
CBX3-207ENST00000481300 METTL5Q9NRN9 209 aaKnown RBP6.24□□□□□ -1.41
CBX3-207ENST00000481300 CRIM1Q9NZV1 1036 aa6.24□□□□□ -1.41
CBX3-207ENST00000481300 ZC3H7BQ9UGR2 993 aaKnown RBP6.24□□□□□ -1.41
CBX3-207ENST00000481300 GPN3Q9UHW5 284 aaPredicted RBP6.24□□□□□ -1.41
CBX3-207ENST00000481300 DAGLAQ9Y4D2 1042 aa6.24□□□□□ -1.41
CBX3-207ENST00000481300 FBXO24O75426 580 aa6.23□□□□□ -1.41
CBX3-207ENST00000481300 PPP2R3AQ06190 1150 aa6.23□□□□□ -1.41
CBX3-207ENST00000481300 DUSP27Q5VZP5 1158 aa6.23□□□□□ -1.41
CBX3-207ENST00000481300 PDZD3Q86UT5 571 aa6.23□□□□□ -1.41
CBX3-207ENST00000481300 RNF34Q969K3 372 aa6.23□□□□□ -1.41
CBX3-207ENST00000481300 LRRC4CQ9HCJ2 640 aa6.23□□□□□ -1.41
CBX3-207ENST00000481300 BSDC1Q9NW68 430 aaPredicted RBP6.23□□□□□ -1.41
CBX3-207ENST00000481300 PCDHGC5Q9Y5F6 944 aa6.23□□□□□ -1.41
CBX3-207ENST00000481300 GSTP1P09211 210 aaKnown RBP6.22□□□□□ -1.41
CBX3-207ENST00000481300 CYP27A1Q02318 531 aa6.22□□□□□ -1.41
CBX3-207ENST00000481300 KIF4BQ2VIQ3 1234 aa6.22□□□□□ -1.41
CBX3-207ENST00000481300 LDLRAD1Q5T700 205 aa6.22□□□□□ -1.41
CBX3-207ENST00000481300 HS2ST1Q7LGA3 356 aa6.22□□□□□ -1.41
CBX3-207ENST00000481300 STK35Q8TDR2 534 aa6.22□□□□□ -1.41
CBX3-207ENST00000481300 FANCD2OSQ96PS1 177 aa6.22□□□□□ -1.41
CBX3-207ENST00000481300 TMEM39AQ9NV64 488 aa6.22□□□□□ -1.41
CBX3-207ENST00000481300 FANCCQ00597 558 aa6.21□□□□□ -1.42
CBX3-207ENST00000481300 ID3Q02535 119 aa6.21□□□□□ -1.42
CBX3-207ENST00000481300 OGFOD3Q6PK18 319 aa6.21□□□□□ -1.42
CBX3-207ENST00000481300 CBLL1Q75N03 491 aa6.21□□□□□ -1.42
CBX3-207ENST00000481300 SV2BQ7L1I2 683 aa6.21□□□□□ -1.42
CBX3-207ENST00000481300 ANKRD24Q8TF21 1146 aa6.21□□□□□ -1.42
CBX3-207ENST00000481300 FBXL18Q96ME1 805 aa6.21□□□□□ -1.42
CBX3-207ENST00000481300 NOC4LQ9BVI4 516 aaKnown RBP6.21□□□□□ -1.42
CBX3-207ENST00000481300 DISC1Q9NRI5 854 aa6.21□□□□□ -1.42
CBX3-207ENST00000481300 KRT82Q9NSB4 513 aa6.21□□□□□ -1.42
CBX3-207ENST00000481300 GGT7Q9UJ14 662 aa6.21□□□□□ -1.42
CBX3-207ENST00000481300 SAMM50Q9Y512 469 aa6.21□□□□□ -1.42
CBX3-207ENST00000481300 RLBP1P12271 317 aa6.2□□□□□ -1.42
CBX3-207ENST00000481300 CDK5R2Q13319 367 aa6.2□□□□□ -1.42
CBX3-207ENST00000481300 TP53INP2Q8IXH6 220 aa6.2□□□□□ -1.42
CBX3-207ENST00000481300 NECAB3Q96P71 396 aaPredicted RBP6.2□□□□□ -1.42
CBX3-207ENST00000481300 ATXN3LQ9H3M9 355 aa6.2□□□□□ -1.42
CBX3-207ENST00000481300 PAK6Q9NQU5 681 aaPredicted RBP6.2□□□□□ -1.42
CBX3-207ENST00000481300 RNF114Q9Y508 228 aa6.2□□□□□ -1.42
CBX3-207ENST00000481300 SLFN14P0C7P3 912 aa6.19□□□□□ -1.42
CBX3-207ENST00000481300 LMNB1P20700 586 aa6.19□□□□□ -1.42
CBX3-207ENST00000481300 TXKP42681 527 aa6.19□□□□□ -1.42
CBX3-207ENST00000481300 HDLBPQ00341 1268 aaKnown RBP6.19□□□□□ -1.42
CBX3-207ENST00000481300 TTLL4Q14679 1199 aa6.19□□□□□ -1.42
CBX3-207ENST00000481300 C9orf131Q5VYM1 1079 aa6.19□□□□□ -1.42
CBX3-207ENST00000481300 WFDC3Q8IUB2 231 aa6.19□□□□□ -1.42
CBX3-207ENST00000481300 SULF2Q8IWU5 870 aa6.19□□□□□ -1.42
CBX3-207ENST00000481300 FLCNQ8NFG4 579 aa6.19□□□□□ -1.42
CBX3-207ENST00000481300 PIDD1Q9HB75 910 aa6.19□□□□□ -1.42
CBX3-207ENST00000481300 ENC1O14682 589 aa6.18□□□□□ -1.42
CBX3-207ENST00000481300 CELA3AP09093 270 aa6.18□□□□□ -1.42
CBX3-207ENST00000481300 FAM87AP0C7U9 286 aa6.18□□□□□ -1.42
CBX3-207ENST00000481300 ERCC5P28715 1186 aaPredicted RBP6.18□□□□□ -1.42
CBX3-207ENST00000481300 PWP1Q13610 501 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms