RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 IFNL2Q8IZJ0 200 aa8.85□□□□□ -0.99
LRCH3-216ENST00000481048 PIGBQ92521 554 aa8.85□□□□□ -0.99
LRCH3-216ENST00000481048 PRDM6Q9NQX0 595 aa8.85□□□□□ -0.99
LRCH3-216ENST00000481048 HIRAP54198 1017 aaPredicted RBP8.84□□□□□ -0.99
LRCH3-216ENST00000481048 ZMYM1Q5SVZ6 1142 aa8.84□□□□□ -0.99
LRCH3-216ENST00000481048 HDGFL1Q5TGJ6 251 aa8.84□□□□□ -0.99
LRCH3-216ENST00000481048 OGFOD1Q8N543 542 aa8.84□□□□□ -0.99
LRCH3-216ENST00000481048 ZNF280CQ8ND82 737 aa8.84□□□□□ -0.99
LRCH3-216ENST00000481048 MKRN1Q9UHC7 482 aaKnown RBP8.84□□□□□ -0.99
LRCH3-216ENST00000481048 KCNH4Q9UQ05 1017 aa8.84□□□□□ -0.99
LRCH3-216ENST00000481048 CD2APQ9Y5K6 639 aa8.84□□□□□ -0.99
LRCH3-216ENST00000481048 C4BP0C0L5 1744 aa8.83□□□□□ -1
LRCH3-216ENST00000481048 TOGARAM1Q9Y4F4 1720 aa8.83□□□□□ -1
LRCH3-216ENST00000481048 LOC102724428A0A0B4J2F2 783 aa8.83□□□□□ -1
LRCH3-216ENST00000481048 PALM3A6NDB9 673 aaPredicted RBP8.83□□□□□ -1
LRCH3-216ENST00000481048 HSP90AB1P08238 724 aaKnown RBP8.83□□□□□ -1
LRCH3-216ENST00000481048 SSFA2P28290 1259 aa8.83□□□□□ -1
LRCH3-216ENST00000481048 SIK1P57059 783 aa8.83□□□□□ -1
LRCH3-216ENST00000481048 RSPO4Q2I0M5 234 aaPredicted RBP8.83□□□□□ -1
LRCH3-216ENST00000481048 LARGE2Q8N3Y3 721 aa8.83□□□□□ -1
LRCH3-216ENST00000481048 TSEN2Q8NCE0 465 aaKnown RBP8.83□□□□□ -1
LRCH3-216ENST00000481048 SUSD3Q96L08 255 aa8.83□□□□□ -1
LRCH3-216ENST00000481048 UCN2Q96RP3 112 aa8.83□□□□□ -1
LRCH3-216ENST00000481048 TPSG1Q9NRR2 321 aa8.83□□□□□ -1
LRCH3-216ENST00000481048 ERVV-2B6SEH9 535 aa8.82□□□□□ -1
LRCH3-216ENST00000481048 M0R2N6 131 aa8.82□□□□□ -1
LRCH3-216ENST00000481048 ATP9BO43861 1147 aa8.82□□□□□ -1
LRCH3-216ENST00000481048 PPP1R12BO60237 982 aaPredicted RBP8.82□□□□□ -1
LRCH3-216ENST00000481048 PHKG2P15735 406 aa8.82□□□□□ -1
LRCH3-216ENST00000481048 TYRO3Q06418 890 aa8.82□□□□□ -1
LRCH3-216ENST00000481048 AMOTQ4VCS5 1084 aa8.82□□□□□ -1
LRCH3-216ENST00000481048 BHMTQ93088 406 aa8.82□□□□□ -1
LRCH3-216ENST00000481048 ZNF594Q96JF6 807 aaPredicted RBP8.82□□□□□ -1
LRCH3-216ENST00000481048 TMOD3Q9NYL9 352 aa8.82□□□□□ -1
LRCH3-216ENST00000481048 RBM19Q9Y4C8 960 aaKnown RBP8.82□□□□□ -1
LRCH3-216ENST00000481048 GOLGB1Q14789 3259 aaKnown RBP8.82□□□□□ -1
LRCH3-216ENST00000481048 ZNF831Q5JPB2 1677 aa8.81□□□□□ -1
LRCH3-216ENST00000481048 NID1P14543 1247 aa8.81□□□□□ -1
LRCH3-216ENST00000481048 EIF4A2Q14240 407 aaKnown RBP8.81□□□□□ -1
LRCH3-216ENST00000481048 GRIK4Q16099 956 aa8.81□□□□□ -1
LRCH3-216ENST00000481048 NKAPLQ5M9Q1 402 aa8.81□□□□□ -1
LRCH3-216ENST00000481048 C20orf204Q6ZNR8 217 aa8.81□□□□□ -1
LRCH3-216ENST00000481048 NLGN2Q8NFZ4 835 aa8.81□□□□□ -1
LRCH3-216ENST00000481048 NACC1Q96RE7 527 aa8.81□□□□□ -1
LRCH3-216ENST00000481048 PCGF6Q9BYE7 350 aa8.81□□□□□ -1
LRCH3-216ENST00000481048 IGSF1Q8N6C5 1336 aa8.8□□□□□ -1
LRCH3-216ENST00000481048 C1QTNF8P60827 252 aa8.8□□□□□ -1
LRCH3-216ENST00000481048 TBC1D8BQ0IIM8 1120 aa8.8□□□□□ -1
LRCH3-216ENST00000481048 PLEKHO1Q53GL0 409 aaPredicted RBP8.8□□□□□ -1
LRCH3-216ENST00000481048 TRAPPC3LQ5T215 181 aa8.8□□□□□ -1
LRCH3-216ENST00000481048 PANK3Q9H999 370 aa8.8□□□□□ -1
LRCH3-216ENST00000481048 ASAP1Q9ULH1 1129 aa8.8□□□□□ -1
LRCH3-216ENST00000481048 C21orf2O43822 256 aa8.79□□□□□ -1
LRCH3-216ENST00000481048 LILRB5O75023 590 aa8.79□□□□□ -1
LRCH3-216ENST00000481048 HSPA5P11021 654 aaKnown RBP8.79□□□□□ -1
LRCH3-216ENST00000481048 FLIIQ13045 1269 aa8.79□□□□□ -1
LRCH3-216ENST00000481048 MSL1Q68DK7 614 aa8.79□□□□□ -1
LRCH3-216ENST00000481048 ALDH16A1Q8IZ83 802 aa8.79□□□□□ -1
LRCH3-216ENST00000481048 SIX5Q8N196 739 aa8.79□□□□□ -1
LRCH3-216ENST00000481048 POLR3GLQ9BT43 218 aa8.79□□□□□ -1
LRCH3-216ENST00000481048 IGFLR1Q9H665 355 aa8.79□□□□□ -1
LRCH3-216ENST00000481048 MYH14Q7Z406 1995 aaKnown RBP8.79□□□□□ -1
LRCH3-216ENST00000481048 KIF13BQ9NQT8 1826 aa8.78□□□□□ -1
LRCH3-216ENST00000481048 YBX3P16989 372 aaKnown RBP eCLIP8.78□□□□□ -1
LRCH3-216ENST00000481048 TNNT2P45379 298 aaPredicted RBP8.78□□□□□ -1
LRCH3-216ENST00000481048 BTLAQ7Z6A9 289 aa8.78□□□□□ -1
LRCH3-216ENST00000481048 MORC1Q86VD1 984 aa8.78□□□□□ -1
LRCH3-216ENST00000481048 LINC00116Q8NCU8 138 aa8.78□□□□□ -1
LRCH3-216ENST00000481048 UBE2OQ9C0C9 1292 aaKnown RBP8.78□□□□□ -1
LRCH3-216ENST00000481048 ATG3Q9NT62 314 aa8.78□□□□□ -1
LRCH3-216ENST00000481048 KNSTRNQ9Y448 316 aa8.78□□□□□ -1
LRCH3-216ENST00000481048 DYRK3O43781 588 aa8.77□□□□□ -1.01
LRCH3-216ENST00000481048 C1orf141Q5JVX7 400 aa8.77□□□□□ -1.01
LRCH3-216ENST00000481048 NLGN1Q8N2Q7 840 aa8.77□□□□□ -1.01
LRCH3-216ENST00000481048 RTCBQ9Y3I0 505 aaKnown RBP8.77□□□□□ -1.01
LRCH3-216ENST00000481048 VIRMAQ69YN4 1812 aaKnown RBP8.76□□□□□ -1.01
LRCH3-216ENST00000481048 RPS6KA4O75676 772 aa8.76□□□□□ -1.01
LRCH3-216ENST00000481048 DKK1O94907 266 aa8.76□□□□□ -1.01
LRCH3-216ENST00000481048 MTHFSP49914 203 aa8.76□□□□□ -1.01
LRCH3-216ENST00000481048 CABP4P57796 275 aa8.76□□□□□ -1.01
LRCH3-216ENST00000481048 TGFB2P61812 414 aa8.76□□□□□ -1.01
LRCH3-216ENST00000481048 ITPK1Q13572 414 aa8.76□□□□□ -1.01
LRCH3-216ENST00000481048 AMIGO3Q86WK7 504 aa8.76□□□□□ -1.01
LRCH3-216ENST00000481048 SCG3Q8WXD2 468 aaKnown RBP8.76□□□□□ -1.01
LRCH3-216ENST00000481048 C2orf49Q9BVC5 232 aaPredicted RBP8.76□□□□□ -1.01
LRCH3-216ENST00000481048 CNTNAP4Q9C0A0 1308 aa8.76□□□□□ -1.01
LRCH3-216ENST00000481048 SCN11AQ9UI33 1791 aa8.76□□□□□ -1.01
LRCH3-216ENST00000481048 KDRP35968 1356 aa8.75□□□□□ -1.01
LRCH3-216ENST00000481048 COL5A3P25940 1745 aaPredicted RBP8.75□□□□□ -1.01
LRCH3-216ENST00000481048 SCO2A0A1W2PP80 73 aa8.75□□□□□ -1.01
LRCH3-216ENST00000481048 PRKCSHP14314 528 aaPredicted RBP8.75□□□□□ -1.01
LRCH3-216ENST00000481048 RASA1P20936 1047 aa8.75□□□□□ -1.01
LRCH3-216ENST00000481048 HIF1AQ16665 826 aa8.75□□□□□ -1.01
LRCH3-216ENST00000481048 ZNF530Q6P9A1 599 aaPredicted RBP8.75□□□□□ -1.01
LRCH3-216ENST00000481048 STAG2Q8N3U4 1231 aa8.75□□□□□ -1.01
LRCH3-216ENST00000481048 CCER1Q8TC90 406 aaPredicted RBP8.75□□□□□ -1.01
LRCH3-216ENST00000481048 NUDT8Q8WV74 236 aa8.75□□□□□ -1.01
LRCH3-216ENST00000481048 KRTAP4-8Q9BYQ9 185 aa8.75□□□□□ -1.01
LRCH3-216ENST00000481048 JPH1Q9HDC5 661 aaPredicted RBP8.75□□□□□ -1.01
LRCH3-216ENST00000481048 SLC6A14Q9UN76 642 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms