RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 MAP3K5Q99683 1374 aa10.65□□□□□ -0.71
VEGFA-212ENST00000480614 LINS1Q8NG48 757 aa10.65□□□□□ -0.71
VEGFA-212ENST00000480614 FAM212AQ96EL1 285 aa10.65□□□□□ -0.71
VEGFA-212ENST00000480614 NAPGQ99747 312 aaPredicted RBP10.65□□□□□ -0.71
VEGFA-212ENST00000480614 MICALL1Q8N3F8 863 aa10.64□□□□□ -0.71
VEGFA-212ENST00000480614 LEO1Q8WVC0 666 aaPredicted RBP10.64□□□□□ -0.71
VEGFA-212ENST00000480614 NIP7Q9Y221 180 aaKnown RBP eCLIP10.64□□□□□ -0.71
VEGFA-212ENST00000480614 AKAP4Q5JQC9 854 aa10.64□□□□□ -0.71
VEGFA-212ENST00000480614 CCDC186Q7Z3E2 898 aa10.64□□□□□ -0.71
VEGFA-212ENST00000480614 ZC3H12CQ9C0D7 883 aaKnown RBP10.64□□□□□ -0.71
VEGFA-212ENST00000480614 ARHGAP25P42331 645 aa10.64□□□□□ -0.71
VEGFA-212ENST00000480614 STRN3Q13033 797 aa10.64□□□□□ -0.71
VEGFA-212ENST00000480614 NECAB1Q8N987 351 aa10.64□□□□□ -0.71
VEGFA-212ENST00000480614 MCUR1Q96AQ8 359 aa10.64□□□□□ -0.71
VEGFA-212ENST00000480614 BAG1Q99933 345 aaPredicted RBP10.64□□□□□ -0.71
VEGFA-212ENST00000480614 UHRF1BP1LA0JNW5 1464 aa10.64□□□□□ -0.71
VEGFA-212ENST00000480614 PARP3Q9Y6F1 533 aa10.64□□□□□ -0.71
VEGFA-212ENST00000480614 MUM1L1Q5H9M0 696 aa10.64□□□□□ -0.71
VEGFA-212ENST00000480614 ZKSCAN3Q9BRR0 538 aa10.64□□□□□ -0.71
VEGFA-212ENST00000480614 RP1L1Q8IWN7 2480 aaPredicted RBP10.64□□□□□ -0.71
VEGFA-212ENST00000480614 PLCH2O75038 1416 aa10.64□□□□□ -0.71
VEGFA-212ENST00000480614 SYNRGQ9UMZ2 1314 aa10.64□□□□□ -0.71
VEGFA-212ENST00000480614 KAT6AQ92794 2004 aa10.64□□□□□ -0.71
VEGFA-212ENST00000480614 URB2Q14146 1524 aaKnown RBP10.64□□□□□ -0.71
VEGFA-212ENST00000480614 MTMR3Q13615 1198 aa10.64□□□□□ -0.71
VEGFA-212ENST00000480614 PLXNC1O60486 1568 aa10.64□□□□□ -0.71
VEGFA-212ENST00000480614 IBTKQ9P2D0 1353 aaPredicted RBP10.64□□□□□ -0.71
VEGFA-212ENST00000480614 CEP85LQ5SZL2 805 aa10.64□□□□□ -0.71
VEGFA-212ENST00000480614 ZCRB1Q8TBF4 217 aaKnown RBP10.64□□□□□ -0.71
VEGFA-212ENST00000480614 ZFP91Q96JP5 570 aaPredicted RBP10.64□□□□□ -0.71
VEGFA-212ENST00000480614 SATB1Q01826 763 aa10.64□□□□□ -0.71
VEGFA-212ENST00000480614 PPP2R3AQ06190 1150 aa10.64□□□□□ -0.71
VEGFA-212ENST00000480614 TMEM87BQ96K49 555 aa10.64□□□□□ -0.71
VEGFA-212ENST00000480614 IGSF22Q8N9C0 903 aa10.64□□□□□ -0.71
VEGFA-212ENST00000480614 NOP56O00567 594 aaKnown RBP10.63□□□□□ -0.71
VEGFA-212ENST00000480614 MYL5Q02045 173 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 C8orf74Q6P047 294 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 P3H4Q92791 437 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 HAUS8Q9BT25 410 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 IFNKQ9P0W0 207 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 CREB3L3Q68CJ9 461 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 SDCCAG8Q86SQ7 713 aaPredicted RBP10.63□□□□□ -0.71
VEGFA-212ENST00000480614 ERO1AQ96HE7 468 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 ZBTB24O43167 697 aaPredicted RBP10.63□□□□□ -0.71
VEGFA-212ENST00000480614 MCM7P33993 719 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 DNM1Q05193 864 aaKnown RBP10.63□□□□□ -0.71
VEGFA-212ENST00000480614 CEP120Q8N960 986 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 LRRC2Q9BYS8 371 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 C14orf93Q9H972 538 aaKnown RBP10.63□□□□□ -0.71
VEGFA-212ENST00000480614 RASA3Q14644 834 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 LZTFL1Q9NQ48 299 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 FLT4P35916 1363 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 IL2RBP14784 551 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 ZNF365Q70YC5 407 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 RBM17Q96I25 401 aaKnown RBP10.63□□□□□ -0.71
VEGFA-212ENST00000480614 ARHGEF12Q9NZN5 1544 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 MYO5CQ9NQX4 1742 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 PCK1P35558 622 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 HELLSQ9NRZ9 838 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 IRX4P78413 519 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 RAPGEF1Q13905 1077 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 C20orf194Q5TEA3 1177 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 ZRANB1Q9UGI0 708 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 CUTAO60888 179 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 PPFIA1Q13136 1202 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 TTC16Q8NEE8 873 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 CTNND2Q9UQB3 1225 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 RTCBQ9Y3I0 505 aaKnown RBP10.63□□□□□ -0.71
VEGFA-212ENST00000480614 ASIC2Q16515 512 aa10.63□□□□□ -0.71
VEGFA-212ENST00000480614 RAB3GAP1Q15042 981 aa10.62□□□□□ -0.71
VEGFA-212ENST00000480614 RUFY3Q7L099 469 aa10.62□□□□□ -0.71
VEGFA-212ENST00000480614 CCT6AP40227 531 aaKnown RBP10.62□□□□□ -0.71
VEGFA-212ENST00000480614 SMIM23A6NLE4 172 aa10.62□□□□□ -0.71
VEGFA-212ENST00000480614 TSHZ3Q63HK5 1081 aa10.62□□□□□ -0.71
VEGFA-212ENST00000480614 MAIP1Q8WWC4 291 aa10.62□□□□□ -0.71
VEGFA-212ENST00000480614 DENND2AQ9ULE3 1009 aa10.62□□□□□ -0.71
VEGFA-212ENST00000480614 GABPAQ06546 454 aa10.62□□□□□ -0.71
VEGFA-212ENST00000480614 CDCA7Q9BWT1 371 aaPredicted RBP10.62□□□□□ -0.71
VEGFA-212ENST00000480614 A0A1B0GUL7 405 aa10.62□□□□□ -0.71
VEGFA-212ENST00000480614 TTC36A6NLP5 189 aa10.62□□□□□ -0.71
VEGFA-212ENST00000480614 GNA14O95837 355 aa10.62□□□□□ -0.71
VEGFA-212ENST00000480614 KIF11P52732 1056 aa10.62□□□□□ -0.71
VEGFA-212ENST00000480614 NMIQ13287 307 aaPredicted RBP10.62□□□□□ -0.71
VEGFA-212ENST00000480614 RASSF2P50749 326 aa10.62□□□□□ -0.71
VEGFA-212ENST00000480614 XRCC6P12956 609 aaKnown RBP eCLIP10.62□□□□□ -0.713e-22■□□□□ 8
VEGFA-212ENST00000480614 CLEC11AQ9Y240 323 aa10.62□□□□□ -0.71
VEGFA-212ENST00000480614 TOM1O60784 492 aa10.62□□□□□ -0.71
VEGFA-212ENST00000480614 PARP2Q9UGN5 583 aa10.62□□□□□ -0.71
VEGFA-212ENST00000480614 DAPK3O43293 454 aa10.62□□□□□ -0.71
VEGFA-212ENST00000480614 PPFIA2O75334 1257 aa10.62□□□□□ -0.71
VEGFA-212ENST00000480614 STMN1P16949 149 aa10.62□□□□□ -0.71
VEGFA-212ENST00000480614 GKAP1Q5VSY0 366 aaPredicted RBP10.62□□□□□ -0.71
VEGFA-212ENST00000480614 CFAP74Q9C0B2 1584 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 KMT5BQ4FZB7 885 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 PPP4R1Q8TF05 950 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 IWS1Q96ST2 819 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 LARP6Q9BRS8 491 aaKnown RBP10.61□□□□□ -0.71
VEGFA-212ENST00000480614 PNMA2Q9UL42 364 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 PCDH11XQ9BZA7 1347 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 PCDH11YQ9BZA8 1340 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms