RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 ADGRA1Q86SQ6 560 aa12.4□□□□□ -0.42
LINC00173-203ENST00000480237 TBC1D22AQ8WUA7 517 aa12.4□□□□□ -0.42
LINC00173-203ENST00000480237 NAPBQ9H115 298 aa12.4□□□□□ -0.42
LINC00173-203ENST00000480237 ZSWIM6Q9HCJ5 1215 aa12.4□□□□□ -0.42
LINC00173-203ENST00000480237 PDRG1Q9NUG6 133 aa12.4□□□□□ -0.42
LINC00173-203ENST00000480237 TAF6LQ9Y6J9 622 aa12.4□□□□□ -0.42
LINC00173-203ENST00000480237 SLC4A4Q9Y6R1 1079 aa12.4□□□□□ -0.42
LINC00173-203ENST00000480237 GOLGB1Q14789 3259 aaKnown RBP12.4□□□□□ -0.43
LINC00173-203ENST00000480237 SNPHO15079 494 aa12.39□□□□□ -0.43
LINC00173-203ENST00000480237 C21orf2O43822 256 aa12.39□□□□□ -0.43
LINC00173-203ENST00000480237 IGSF3O75054 1194 aa12.39□□□□□ -0.43
LINC00173-203ENST00000480237 FGAP02671 866 aa12.39□□□□□ -0.43
LINC00173-203ENST00000480237 HAND2P61296 217 aa12.39□□□□□ -0.43
LINC00173-203ENST00000480237 GSTO1P78417 241 aa12.39□□□□□ -0.43
LINC00173-203ENST00000480237 E2F4Q16254 413 aa12.39□□□□□ -0.43
LINC00173-203ENST00000480237 CCDC93Q567U6 631 aa12.39□□□□□ -0.43
LINC00173-203ENST00000480237 MFSD14BQ5SR56 506 aa12.39□□□□□ -0.43
LINC00173-203ENST00000480237 TTLL5Q6EMB2 1281 aa12.39□□□□□ -0.43
LINC00173-203ENST00000480237 SUPT20HQ8NEM7 779 aa12.39□□□□□ -0.43
LINC00173-203ENST00000480237 NOL10Q9BSC4 688 aaKnown RBP12.39□□□□□ -0.43
LINC00173-203ENST00000480237 NACAP1Q9BZK3 213 aa12.39□□□□□ -0.43
LINC00173-203ENST00000480237 FAM205AQ6ZU69 1335 aa12.39□□□□□ -0.43
LINC00173-203ENST00000480237 RPS6KB1P23443 525 aa12.39□□□□□ -0.43
LINC00173-203ENST00000480237 TDO2P48775 406 aa12.39□□□□□ -0.43
LINC00173-203ENST00000480237 AK2P54819 239 aa12.39□□□□□ -0.43
LINC00173-203ENST00000480237 DOK7Q18PE1 504 aa12.39□□□□□ -0.43
LINC00173-203ENST00000480237 ZNF384Q8TF68 577 aa12.39□□□□□ -0.43
LINC00173-203ENST00000480237 TTC14Q96N46 770 aa12.39□□□□□ -0.43
LINC00173-203ENST00000480237 NEK1Q96PY6 1258 aa12.39□□□□□ -0.43
LINC00173-203ENST00000480237 PPP1R1BQ9UD71 204 aaPredicted RBP12.39□□□□□ -0.43
LINC00173-203ENST00000480237 PATL2C9JE40 543 aaKnown RBP12.38□□□□□ -0.43
LINC00173-203ENST00000480237 E7EWF7 191 aa12.38□□□□□ -0.43
LINC00173-203ENST00000480237 ZNF213O14771 459 aa12.38□□□□□ -0.43
LINC00173-203ENST00000480237 HOXB3P14651 431 aaPredicted RBP12.38□□□□□ -0.43
LINC00173-203ENST00000480237 TGFB2P61812 414 aa12.38□□□□□ -0.43
LINC00173-203ENST00000480237 DYNLL1P63167 89 aaKnown RBP12.38□□□□□ -0.43
LINC00173-203ENST00000480237 GTF2IP78347 998 aa12.38□□□□□ -0.43
LINC00173-203ENST00000480237 GRIPAP1Q4V328 841 aa12.38□□□□□ -0.43
LINC00173-203ENST00000480237 STOX1Q6ZVD7 989 aa12.38□□□□□ -0.43
LINC00173-203ENST00000480237 RTFDC1Q9BY42 306 aaPredicted RBP12.38□□□□□ -0.43
LINC00173-203ENST00000480237 EPB41L4AQ9HCS5 686 aaPredicted RBP12.38□□□□□ -0.43
LINC00173-203ENST00000480237 AATFQ9NY61 560 aaKnown RBP eCLIP12.38□□□□□ -0.43
LINC00173-203ENST00000480237 BAZ2BQ9UIF8 2168 aaKnown RBP12.37□□□□□ -0.43
LINC00173-203ENST00000480237 MROH7-TTC4A0A0A0MT08 1334 aa12.37□□□□□ -0.43
LINC00173-203ENST00000480237 PRKAB2O43741 272 aa12.37□□□□□ -0.43
LINC00173-203ENST00000480237 LDHCP07864 332 aa12.37□□□□□ -0.43
LINC00173-203ENST00000480237 HMGB1P09429 215 aaKnown RBP12.37□□□□□ -0.43
LINC00173-203ENST00000480237 ALX1Q15699 326 aa12.37□□□□□ -0.43
LINC00173-203ENST00000480237 IFNL3Q8IZI9 196 aa12.37□□□□□ -0.43
LINC00173-203ENST00000480237 C7orf43Q8WVR3 580 aa12.37□□□□□ -0.43
LINC00173-203ENST00000480237 RIOK1Q9BRS2 568 aaKnown RBP12.37□□□□□ -0.43
LINC00173-203ENST00000480237 CRNKL1Q9BZJ0 848 aaKnown RBP12.37□□□□□ -0.43
LINC00173-203ENST00000480237 DBNDD1Q9H9R9 158 aa12.37□□□□□ -0.43
LINC00173-203ENST00000480237 PIM2Q9P1W9 311 aa12.37□□□□□ -0.43
LINC00173-203ENST00000480237 COL4A5P29400 1685 aa12.37□□□□□ -0.43
LINC00173-203ENST00000480237 GREB1LQ9C091 1923 aaPredicted RBP12.36□□□□□ -0.43
LINC00173-203ENST00000480237 GSG1L2A8MUP6 293 aa12.36□□□□□ -0.43
LINC00173-203ENST00000480237 PPIP5K2O43314 1243 aa12.36□□□□□ -0.43
LINC00173-203ENST00000480237 ECE2O60344 883 aa12.36□□□□□ -0.43
LINC00173-203ENST00000480237 KCNA3P22001 575 aa12.36□□□□□ -0.43
LINC00173-203ENST00000480237 FGD1P98174 961 aa12.36□□□□□ -0.43
LINC00173-203ENST00000480237 ANKRD1Q15327 319 aa12.36□□□□□ -0.43
LINC00173-203ENST00000480237 DIXDC1Q155Q3 683 aa12.36□□□□□ -0.43
LINC00173-203ENST00000480237 GRIK5Q16478 980 aa12.36□□□□□ -0.43
LINC00173-203ENST00000480237 AOC3Q16853 763 aa12.36□□□□□ -0.43
LINC00173-203ENST00000480237 SOGA3Q5TF21 947 aa12.36□□□□□ -0.43
LINC00173-203ENST00000480237 RALYLQ86SE5 291 aaKnown RBP12.36□□□□□ -0.43
LINC00173-203ENST00000480237 SLF2Q8IX21 1173 aa12.36□□□□□ -0.43
LINC00173-203ENST00000480237 RTKN2Q8IZC4 609 aa12.36□□□□□ -0.43
LINC00173-203ENST00000480237 SDR42E1Q8WUS8 393 aa12.36□□□□□ -0.43
LINC00173-203ENST00000480237 TMX3Q96JJ7 454 aa12.36□□□□□ -0.43
LINC00173-203ENST00000480237 TCEANC2Q96MN5 208 aa12.36□□□□□ -0.43
LINC00173-203ENST00000480237 ZNF710Q8N1W2 664 aa12.35□□□□□ -0.43
LINC00173-203ENST00000480237 LIMCH1Q9UPQ0 1083 aa12.35□□□□□ -0.43
LINC00173-203ENST00000480237 BAG3O95817 575 aa12.35□□□□□ -0.43
LINC00173-203ENST00000480237 KIAA2012Q0VF49 1180 aa12.35□□□□□ -0.43
LINC00173-203ENST00000480237 TRDNQ13061 729 aa12.35□□□□□ -0.43
LINC00173-203ENST00000480237 DALRD3Q5D0E6 543 aaKnown RBP12.35□□□□□ -0.43
LINC00173-203ENST00000480237 PODNQ7Z5L7 613 aa12.35□□□□□ -0.43
LINC00173-203ENST00000480237 TBC1D10CQ8IV04 446 aa12.35□□□□□ -0.43
LINC00173-203ENST00000480237 NCOA7Q8NI08 942 aa12.35□□□□□ -0.43
LINC00173-203ENST00000480237 SUGT1Q9Y2Z0 365 aa12.35□□□□□ -0.43
LINC00173-203ENST00000480237 CAMK2BQ13554 666 aa12.34□□□□□ -0.43
LINC00173-203ENST00000480237 COL9A3Q14050 684 aaPredicted RBP12.34□□□□□ -0.43
LINC00173-203ENST00000480237 Q6ZUG5 572 aa12.34□□□□□ -0.43
LINC00173-203ENST00000480237 DHX32Q7L7V1 743 aaKnown RBP12.34□□□□□ -0.43
LINC00173-203ENST00000480237 CERS3Q8IU89 383 aa12.34□□□□□ -0.43
LINC00173-203ENST00000480237 ZSCAN31Q96LW9 406 aaPredicted RBP12.34□□□□□ -0.43
LINC00173-203ENST00000480237 PSMD1Q99460 953 aa12.34□□□□□ -0.43
LINC00173-203ENST00000480237 NBPF3Q9H094 633 aa12.34□□□□□ -0.43
LINC00173-203ENST00000480237 ALDH8A1Q9H2A2 487 aaPredicted RBP12.34□□□□□ -0.43
LINC00173-203ENST00000480237 SH2B1Q9NRF2 756 aaPredicted RBP12.34□□□□□ -0.43
LINC00173-203ENST00000480237 EMILIN3Q9NT22 766 aa12.34□□□□□ -0.43
LINC00173-203ENST00000480237 CD2APQ9Y5K6 639 aa12.34□□□□□ -0.43
LINC00173-203ENST00000480237 MINDY4BA8MYZ0 360 aa12.33□□□□□ -0.44
LINC00173-203ENST00000480237 F8W031 263 aaPredicted RBP12.33□□□□□ -0.44
LINC00173-203ENST00000480237 PTGER2P43116 358 aa12.33□□□□□ -0.44
LINC00173-203ENST00000480237 BTDP43251 543 aa12.33□□□□□ -0.44
LINC00173-203ENST00000480237 USP5P45974 858 aa12.33□□□□□ -0.44
LINC00173-203ENST00000480237 CTDSPL2Q05D32 466 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms