RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 ZKSCAN1P17029 563 aaPredicted RBP20.05■□□□□ 0.8
SCAMP3-207ENST00000480219 USP5P45974 858 aa20.05■□□□□ 0.8
SCAMP3-207ENST00000480219 TDO2P48775 406 aa20.05■□□□□ 0.8
SCAMP3-207ENST00000480219 RBM5P52756 815 aaKnown RBP eCLIP20.05■□□□□ 0.8
SCAMP3-207ENST00000480219 DPY19L2Q6NUT2 758 aa20.05■□□□□ 0.8
SCAMP3-207ENST00000480219 CTR9Q6PD62 1173 aa20.05■□□□□ 0.8
SCAMP3-207ENST00000480219 DDRGK1Q96HY6 314 aa20.05■□□□□ 0.8
SCAMP3-207ENST00000480219 NBPF3Q9H094 633 aa20.05■□□□□ 0.8
SCAMP3-207ENST00000480219 DDX4Q9NQI0 724 aaKnown RBP20.05■□□□□ 0.8
SCAMP3-207ENST00000480219 FAM198AQ9UFP1 575 aa20.05■□□□□ 0.8
SCAMP3-207ENST00000480219 TAOK2Q9UL54 1235 aa20.05■□□□□ 0.8
SCAMP3-207ENST00000480219 ZNF213O14771 459 aa20.04■□□□□ 0.8
SCAMP3-207ENST00000480219 FGRP09769 529 aa20.04■□□□□ 0.8
SCAMP3-207ENST00000480219 KRT32Q14532 448 aa20.04■□□□□ 0.8
SCAMP3-207ENST00000480219 C12orf60Q5U649 245 aa20.04■□□□□ 0.8
SCAMP3-207ENST00000480219 OSBPL5Q9H0X9 879 aaPredicted RBP20.04■□□□□ 0.8
SCAMP3-207ENST00000480219 TDRD3Q9H7E2 651 aaKnown RBP20.04■□□□□ 0.8
SCAMP3-207ENST00000480219 TAF6LQ9Y6J9 622 aa20.04■□□□□ 0.8
SCAMP3-207ENST00000480219 ATRNL1Q5VV63 1379 aa20.04■□□□□ 0.8
SCAMP3-207ENST00000480219 BAZ2AQ9UIF9 1905 aaKnown RBP20.04■□□□□ 0.8
SCAMP3-207ENST00000480219 USP17L12C9JPN9 530 aa20.03■□□□□ 0.8
SCAMP3-207ENST00000480219 USP17L21D6R901 530 aa20.03■□□□□ 0.8
SCAMP3-207ENST00000480219 EGFRP00533 1210 aa20.03■□□□□ 0.8
SCAMP3-207ENST00000480219 PCP11498 1178 aaKnown RBP20.03■□□□□ 0.8
SCAMP3-207ENST00000480219 NT5C2P49902 561 aa20.03■□□□□ 0.8
SCAMP3-207ENST00000480219 NFIAQ12857 509 aa20.03■□□□□ 0.8
SCAMP3-207ENST00000480219 FAM83AQ86UY5 434 aa20.03■□□□□ 0.8
SCAMP3-207ENST00000480219 ZNF70Q9UC06 446 aaPredicted RBP20.03■□□□□ 0.8
SCAMP3-207ENST00000480219 SCN4AP35499 1836 aa20.02■□□□□ 0.8
SCAMP3-207ENST00000480219 PPARAQ07869 468 aa20.02■□□□□ 0.8
SCAMP3-207ENST00000480219 KIF4BQ2VIQ3 1234 aa20.02■□□□□ 0.8
SCAMP3-207ENST00000480219 NBPF9Q3BBW0 867 aa20.02■□□□□ 0.8
SCAMP3-207ENST00000480219 MAPKAPK5Q8IW41 473 aa20.02■□□□□ 0.8
SCAMP3-207ENST00000480219 STAG1Q8WVM7 1258 aa20.02■□□□□ 0.8
SCAMP3-207ENST00000480219 ADARB2Q9NS39 739 aaKnown RBP20.02■□□□□ 0.8
SCAMP3-207ENST00000480219 DCAF8L1A6NGE4 600 aa20.01■□□□□ 0.79
SCAMP3-207ENST00000480219 E7EWF7 191 aa20.01■□□□□ 0.79
SCAMP3-207ENST00000480219 MYO1BO43795 1136 aa20.01■□□□□ 0.79
SCAMP3-207ENST00000480219 EPS15P42566 896 aa20.01■□□□□ 0.79
SCAMP3-207ENST00000480219 RABEP1Q15276 862 aa20.01■□□□□ 0.79
SCAMP3-207ENST00000480219 STOX1Q6ZVD7 989 aa20.01■□□□□ 0.79
SCAMP3-207ENST00000480219 SAMD7Q7Z3H4 446 aa20.01■□□□□ 0.79
SCAMP3-207ENST00000480219 ZSWIM6Q9HCJ5 1215 aa20.01■□□□□ 0.79
SCAMP3-207ENST00000480219 MCM9Q9NXL9 1143 aa20.01■□□□□ 0.79
SCAMP3-207ENST00000480219 TMOD2Q9NZR1 351 aa20.01■□□□□ 0.79
SCAMP3-207ENST00000480219 MYH1P12882 1939 aa20.01■□□□□ 0.79
SCAMP3-207ENST00000480219 CNTNAP1P78357 1384 aa20■□□□□ 0.79
SCAMP3-207ENST00000480219 LMOD1P29536 600 aaPredicted RBP20■□□□□ 0.79
SCAMP3-207ENST00000480219 ADCK5Q3MIX3 580 aa20■□□□□ 0.79
SCAMP3-207ENST00000480219 METTL16Q86W50 562 aaKnown RBP20■□□□□ 0.79
SCAMP3-207ENST00000480219 TBC1D10CQ8IV04 446 aa20■□□□□ 0.79
SCAMP3-207ENST00000480219 TRPM4Q8TD43 1214 aa20■□□□□ 0.79
SCAMP3-207ENST00000480219 FAM151AQ8WW52 585 aa20■□□□□ 0.79
SCAMP3-207ENST00000480219 DHX36Q9H2U1 1008 aaKnown RBP20■□□□□ 0.79
SCAMP3-207ENST00000480219 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20■□□□□ 0.79
SCAMP3-207ENST00000480219 RBM19Q9Y4C8 960 aaKnown RBP20■□□□□ 0.79
SCAMP3-207ENST00000480219 PSMA5P28066 241 aa19.99■□□□□ 0.79
SCAMP3-207ENST00000480219 HAND2P61296 217 aa19.99■□□□□ 0.79
SCAMP3-207ENST00000480219 GABPAQ06546 454 aa19.99■□□□□ 0.79
SCAMP3-207ENST00000480219 TBC1D10BQ4KMP7 808 aaPredicted RBP19.99■□□□□ 0.79
SCAMP3-207ENST00000480219 AKNAD1Q5T1N1 836 aa19.99■□□□□ 0.79
SCAMP3-207ENST00000480219 EHD4Q9H223 541 aa19.99■□□□□ 0.79
SCAMP3-207ENST00000480219 RNF41Q9H4P4 317 aaPredicted RBP19.99■□□□□ 0.79
SCAMP3-207ENST00000480219 PGAP2Q9UHJ9 254 aa19.99■□□□□ 0.79
SCAMP3-207ENST00000480219 TACC3Q9Y6A5 838 aa19.99■□□□□ 0.79
SCAMP3-207ENST00000480219 PITPNM2Q9BZ72 1349 aa19.99■□□□□ 0.79
SCAMP3-207ENST00000480219 SIPA1L1O43166 1804 aa19.98■□□□□ 0.79
SCAMP3-207ENST00000480219 POTECB2RU33 542 aa19.98■□□□□ 0.79
SCAMP3-207ENST00000480219 ORC4O43929 436 aa19.98■□□□□ 0.79
SCAMP3-207ENST00000480219 HMGB1P09429 215 aaKnown RBP19.98■□□□□ 0.79
SCAMP3-207ENST00000480219 PLCD1P51178 756 aa19.98■□□□□ 0.79
SCAMP3-207ENST00000480219 HIRAP54198 1017 aaPredicted RBP19.98■□□□□ 0.79
SCAMP3-207ENST00000480219 USP50Q70EL3 339 aaPredicted RBP19.98■□□□□ 0.79
SCAMP3-207ENST00000480219 SH3BP5LQ7L8J4 393 aa19.98■□□□□ 0.79
SCAMP3-207ENST00000480219 TTC6Q86TZ1 520 aa19.98■□□□□ 0.79
SCAMP3-207ENST00000480219 AMOTL1Q8IY63 956 aa19.98■□□□□ 0.79
SCAMP3-207ENST00000480219 HACL1Q9UJ83 578 aa19.98■□□□□ 0.79
SCAMP3-207ENST00000480219 CYP2D7A0A087X1C5 515 aa19.97■□□□□ 0.79
SCAMP3-207ENST00000480219 CLRN2A0PK11 232 aa19.97■□□□□ 0.79
SCAMP3-207ENST00000480219 IQCA1LA6NCM1 817 aa19.97■□□□□ 0.79
SCAMP3-207ENST00000480219 MINDY4BA8MYZ0 360 aa19.97■□□□□ 0.79
SCAMP3-207ENST00000480219 CYP2D6P10635 497 aa19.97■□□□□ 0.79
SCAMP3-207ENST00000480219 CACNB3P54284 484 aa19.97■□□□□ 0.79
SCAMP3-207ENST00000480219 PICALMQ13492 652 aa19.97■□□□□ 0.79
SCAMP3-207ENST00000480219 ZFPM1Q8IX07 1006 aa19.97■□□□□ 0.79
SCAMP3-207ENST00000480219 JAKMIP1Q96N16 626 aaKnown RBP19.97■□□□□ 0.79
SCAMP3-207ENST00000480219 NEK1Q96PY6 1258 aa19.97■□□□□ 0.79
SCAMP3-207ENST00000480219 ALDH8A1Q9H2A2 487 aaPredicted RBP19.97■□□□□ 0.79
SCAMP3-207ENST00000480219 CNNM2Q9H8M5 875 aa19.97■□□□□ 0.79
SCAMP3-207ENST00000480219 WDR19Q8NEZ3 1342 aa19.97■□□□□ 0.79
SCAMP3-207ENST00000480219 SMIM22K7EJ46 135 aa19.96■□□□□ 0.79
SCAMP3-207ENST00000480219 POLR3DP05423 398 aaPredicted RBP19.96■□□□□ 0.79
SCAMP3-207ENST00000480219 SLC3A2P08195 630 aaKnown RBP19.96■□□□□ 0.79
SCAMP3-207ENST00000480219 CTDSPL2Q05D32 466 aa19.96■□□□□ 0.79
SCAMP3-207ENST00000480219 TNFAIP1Q13829 316 aa19.96■□□□□ 0.79
SCAMP3-207ENST00000480219 C16orf86Q6ZW13 317 aa19.96■□□□□ 0.79
SCAMP3-207ENST00000480219 MB21D2Q8IYB1 491 aaPredicted RBP19.96■□□□□ 0.79
SCAMP3-207ENST00000480219 FBXL16Q8N461 479 aa19.96■□□□□ 0.79
SCAMP3-207ENST00000480219 TTC14Q96N46 770 aa19.96■□□□□ 0.79
SCAMP3-207ENST00000480219 SAP30BPQ9UHR5 308 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms