RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 TBC1D8O95759 1140 aa15.32■□□□□ 0.04
PDZRN3-208ENST00000479530 TPM4P67936 248 aa15.32■□□□□ 0.04
PDZRN3-208ENST00000479530 PAXIP1Q6ZW49 1069 aaPredicted RBP15.32■□□□□ 0.04
PDZRN3-208ENST00000479530 TMEM139Q8IV31 216 aa15.32■□□□□ 0.04
PDZRN3-208ENST00000479530 CCDC34Q96HJ3 373 aa15.32■□□□□ 0.04
PDZRN3-208ENST00000479530 MYL10Q9BUA6 226 aa15.32■□□□□ 0.04
PDZRN3-208ENST00000479530 INTS13Q9NVM9 706 aa15.32■□□□□ 0.04
PDZRN3-208ENST00000479530 TACC3Q9Y6A5 838 aa15.32■□□□□ 0.04
PDZRN3-208ENST00000479530 NWD2Q9ULI1 1742 aa15.32■□□□□ 0.04
PDZRN3-208ENST00000479530 TOGARAM1Q9Y4F4 1720 aa15.32■□□□□ 0.04
PDZRN3-208ENST00000479530 A0A0G2JS52 829 aa15.32■□□□□ 0.04
PDZRN3-208ENST00000479530 CMA1P23946 247 aa15.32■□□□□ 0.04
PDZRN3-208ENST00000479530 ADD2P35612 726 aa15.32■□□□□ 0.04
PDZRN3-208ENST00000479530 KIF23Q02241 960 aaPredicted RBP15.32■□□□□ 0.04
PDZRN3-208ENST00000479530 FANCLQ9NW38 375 aa15.32■□□□□ 0.04
PDZRN3-208ENST00000479530 XIRP1Q702N8 1843 aaKnown RBP15.32■□□□□ 0.04
PDZRN3-208ENST00000479530 ZNF532Q9HCE3 1301 aa15.32■□□□□ 0.04
PDZRN3-208ENST00000479530 IKBKBO14920 756 aa15.31■□□□□ 0.04
PDZRN3-208ENST00000479530 NRDCO43847 1150 aa15.31■□□□□ 0.04
PDZRN3-208ENST00000479530 GYS2P54840 703 aa15.31■□□□□ 0.04
PDZRN3-208ENST00000479530 CCDC102BQ68D86 513 aa15.31■□□□□ 0.04
PDZRN3-208ENST00000479530 SYNE3Q6ZMZ3 975 aa15.31■□□□□ 0.04
PDZRN3-208ENST00000479530 STK11IPQ8N1F8 1099 aa15.31■□□□□ 0.04
PDZRN3-208ENST00000479530 SMARCE1Q969G3 411 aa15.31■□□□□ 0.04
PDZRN3-208ENST00000479530 SHANK3Q9BYB0 1731 aa15.31■□□□□ 0.04
PDZRN3-208ENST00000479530 ANKRD18BA2A2Z9 1011 aa15.31■□□□□ 0.04
PDZRN3-208ENST00000479530 ZFYP08048 801 aaPredicted RBP15.31■□□□□ 0.04
PDZRN3-208ENST00000479530 CDC27P30260 824 aa15.31■□□□□ 0.04
PDZRN3-208ENST00000479530 SHC4Q6S5L8 630 aa15.31■□□□□ 0.04
PDZRN3-208ENST00000479530 FOXP4Q8IVH2 680 aaPredicted RBP15.31■□□□□ 0.04
PDZRN3-208ENST00000479530 NCOA7Q8NI08 942 aa15.31■□□□□ 0.04
PDZRN3-208ENST00000479530 PHKBQ93100 1093 aa15.31■□□□□ 0.04
PDZRN3-208ENST00000479530 CLIC6Q96NY7 704 aa15.31■□□□□ 0.04
PDZRN3-208ENST00000479530 ARGLU1Q9NWB6 273 aaPredicted RBP15.31■□□□□ 0.04
PDZRN3-208ENST00000479530 EFCAB8A8MWE9 144 aa15.3■□□□□ 0.04
PDZRN3-208ENST00000479530 B4E1Z4 1266 aa15.3■□□□□ 0.04
PDZRN3-208ENST00000479530 SYKP43405 635 aa15.3■□□□□ 0.04
PDZRN3-208ENST00000479530 LRRFIP1Q32MZ4 808 aaKnown RBP15.3■□□□□ 0.04
PDZRN3-208ENST00000479530 RALYLQ86SE5 291 aaKnown RBP15.3■□□□□ 0.04
PDZRN3-208ENST00000479530 VSTM4Q8IW00 320 aa15.3■□□□□ 0.04
PDZRN3-208ENST00000479530 UBXN6Q9BZV1 441 aa15.3■□□□□ 0.04
PDZRN3-208ENST00000479530 PDE8BO95263 885 aa15.3■□□□□ 0.04
PDZRN3-208ENST00000479530 MYL5Q02045 173 aa15.3■□□□□ 0.04
PDZRN3-208ENST00000479530 PDE4BQ07343 736 aa15.3■□□□□ 0.04
PDZRN3-208ENST00000479530 SEC31BQ9NQW1 1179 aa15.3■□□□□ 0.04
PDZRN3-208ENST00000479530 TUBE1Q9UJT0 475 aa15.3■□□□□ 0.04
PDZRN3-208ENST00000479530 PPP2R2CQ9Y2T4 447 aa15.3■□□□□ 0.04
PDZRN3-208ENST00000479530 FOXN1O15353 648 aa15.3■□□□□ 0.04
PDZRN3-208ENST00000479530 BMP6P22004 513 aa15.3■□□□□ 0.04
PDZRN3-208ENST00000479530 FAM193AP78312 1265 aa15.3■□□□□ 0.04
PDZRN3-208ENST00000479530 CC2D1AQ6P1N0 951 aaPredicted RBP15.3■□□□□ 0.04
PDZRN3-208ENST00000479530 TOGARAM2Q6ZUX3 1019 aa15.3■□□□□ 0.04
PDZRN3-208ENST00000479530 FBXL16Q8N461 479 aa15.3■□□□□ 0.04
PDZRN3-208ENST00000479530 PAPPAQ13219 1627 aa15.29■□□□□ 0.04
PDZRN3-208ENST00000479530 WTIPA6NIX2 430 aaPredicted RBP15.29■□□□□ 0.04
PDZRN3-208ENST00000479530 CPLX1O14810 134 aa15.29■□□□□ 0.04
PDZRN3-208ENST00000479530 TUBB4AP04350 444 aa15.29■□□□□ 0.04
PDZRN3-208ENST00000479530 TOP1P11387 765 aaKnown RBP15.29■□□□□ 0.04
PDZRN3-208ENST00000479530 PDE6AP16499 860 aa15.29■□□□□ 0.04
PDZRN3-208ENST00000479530 CDK11BP21127 795 aaKnown RBP15.29■□□□□ 0.04
PDZRN3-208ENST00000479530 OAS2P29728 719 aaKnown RBP15.29■□□□□ 0.04
PDZRN3-208ENST00000479530 BRAPQ7Z569 592 aa15.29■□□□□ 0.04
PDZRN3-208ENST00000479530 FBXO3Q9UK99 471 aa15.29■□□□□ 0.04
PDZRN3-208ENST00000479530 GNG11P61952 73 aa15.29■□□□□ 0.04
PDZRN3-208ENST00000479530 RAD51AP2Q09MP3 1159 aa15.29■□□□□ 0.04
PDZRN3-208ENST00000479530 SLC39A14Q15043 492 aa15.29■□□□□ 0.04
PDZRN3-208ENST00000479530 TEX35Q5T0J7 233 aa15.29■□□□□ 0.04
PDZRN3-208ENST00000479530 METTL16Q86W50 562 aaKnown RBP15.29■□□□□ 0.04
PDZRN3-208ENST00000479530 DZIP3Q86Y13 1208 aaKnown RBP15.29■□□□□ 0.04
PDZRN3-208ENST00000479530 CREBRFQ8IUR6 639 aa15.29■□□□□ 0.04
PDZRN3-208ENST00000479530 TEX13AQ9BXU3 409 aaPredicted RBP15.29■□□□□ 0.04
PDZRN3-208ENST00000479530 PRKAB2O43741 272 aa15.28■□□□□ 0.04
PDZRN3-208ENST00000479530 ADKP55263 362 aaKnown RBP15.28■□□□□ 0.04
PDZRN3-208ENST00000479530 CTDSPL2Q05D32 466 aa15.28■□□□□ 0.04
PDZRN3-208ENST00000479530 HPSEQ9Y251 543 aa15.28■□□□□ 0.04
PDZRN3-208ENST00000479530 TCRBV5S4A2TA0A5A2 114 aa15.28■□□□□ 0.04
PDZRN3-208ENST00000479530 SMIM22K7EJ46 135 aa15.28■□□□□ 0.04
PDZRN3-208ENST00000479530 GNL2Q13823 731 aaKnown RBP15.28■□□□□ 0.04
PDZRN3-208ENST00000479530 LONRF3Q496Y0 759 aa15.28■□□□□ 0.04
PDZRN3-208ENST00000479530 MICU3Q86XE3 530 aa15.28■□□□□ 0.04
PDZRN3-208ENST00000479530 DESI2Q9BSY9 194 aa15.28■□□□□ 0.04
PDZRN3-208ENST00000479530 IRX2Q9BZI1 471 aaPredicted RBP15.28■□□□□ 0.04
PDZRN3-208ENST00000479530 CDHR2Q9BYE9 1310 aa15.28■□□□□ 0.04
PDZRN3-208ENST00000479530 MAP3K9P80192 1104 aa15.27■□□□□ 0.04
PDZRN3-208ENST00000479530 SMC1AQ14683 1233 aaKnown RBP15.27■□□□□ 0.04
PDZRN3-208ENST00000479530 SPECC1Q5M775 1068 aa15.27■□□□□ 0.04
PDZRN3-208ENST00000479530 SUSD4Q5VX71 490 aa15.27■□□□□ 0.04
PDZRN3-208ENST00000479530 PDILTQ8N807 584 aa15.27■□□□□ 0.04
PDZRN3-208ENST00000479530 SRRTQ9BXP5 876 aaKnown RBP15.27■□□□□ 0.04
PDZRN3-208ENST00000479530 EPB41L4AQ9HCS5 686 aaPredicted RBP15.27■□□□□ 0.04
PDZRN3-208ENST00000479530 CCP110O43303 1012 aa15.27■□□□□ 0.03
PDZRN3-208ENST00000479530 VPS37DQ86XT2 251 aa15.27■□□□□ 0.03
PDZRN3-208ENST00000479530 PLCD3Q8N3E9 789 aa15.27■□□□□ 0.03
PDZRN3-208ENST00000479530 STRBPQ96SI9 672 aaKnown RBP15.27■□□□□ 0.03
PDZRN3-208ENST00000479530 PARD6BQ9BYG5 372 aa15.27■□□□□ 0.03
PDZRN3-208ENST00000479530 PTPAQ15257 358 aa15.26■□□□□ 0.03
PDZRN3-208ENST00000479530 TICAM2Q86XR7 235 aa15.26■□□□□ 0.03
PDZRN3-208ENST00000479530 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.26■□□□□ 0.03
PDZRN3-208ENST00000479530 ZSWIM4Q9H7M6 989 aa15.26■□□□□ 0.03
PDZRN3-208ENST00000479530 ARMT1Q9H993 441 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms