RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 LTBP3Q9NS15 1303 aa10.15□□□□□ -0.78
GAPVD1-217ENST00000479511 GFRA2O00451 464 aa10.15□□□□□ -0.78
GAPVD1-217ENST00000479511 HTR3BO95264 441 aa10.15□□□□□ -0.78
GAPVD1-217ENST00000479511 ACRP10323 421 aa10.15□□□□□ -0.78
GAPVD1-217ENST00000479511 CDKN1CP49918 316 aaPredicted RBP10.15□□□□□ -0.78
GAPVD1-217ENST00000479511 NEUROD1Q13562 356 aa10.15□□□□□ -0.78
GAPVD1-217ENST00000479511 TMEM40Q8WWA1 233 aa10.15□□□□□ -0.78
GAPVD1-217ENST00000479511 ZNF669Q96BR6 464 aaPredicted RBP10.15□□□□□ -0.78
GAPVD1-217ENST00000479511 RBSNQ9H1K0 784 aa10.15□□□□□ -0.78
GAPVD1-217ENST00000479511 CORINQ9Y5Q5 1042 aa10.15□□□□□ -0.78
GAPVD1-217ENST00000479511 PRR36Q9H6K5 1346 aa10.14□□□□□ -0.79
GAPVD1-217ENST00000479511 ADCY3O60266 1144 aa10.14□□□□□ -0.79
GAPVD1-217ENST00000479511 SMCPP49901 116 aaPredicted RBP10.14□□□□□ -0.79
GAPVD1-217ENST00000479511 PERM1Q5SV97 790 aa10.14□□□□□ -0.79
GAPVD1-217ENST00000479511 HGSNATQ68CP4 663 aa10.14□□□□□ -0.79
GAPVD1-217ENST00000479511 SCARA3Q6AZY7 606 aa10.14□□□□□ -0.79
GAPVD1-217ENST00000479511 SYT9Q86SS6 491 aa10.14□□□□□ -0.79
GAPVD1-217ENST00000479511 SYNPOQ8N3V7 929 aa10.14□□□□□ -0.79
GAPVD1-217ENST00000479511 PRPF38AQ8NAV1 312 aaKnown RBP10.14□□□□□ -0.79
GAPVD1-217ENST00000479511 NAGPAQ9UK23 515 aa10.14□□□□□ -0.79
GAPVD1-217ENST00000479511 SOX1O00570 391 aaPredicted RBP10.13□□□□□ -0.79
GAPVD1-217ENST00000479511 EIF5BO60841 1220 aaKnown RBP10.13□□□□□ -0.79
GAPVD1-217ENST00000479511 GSTP1P09211 210 aaKnown RBP10.13□□□□□ -0.79
GAPVD1-217ENST00000479511 LRRFIP1Q32MZ4 808 aaKnown RBP10.13□□□□□ -0.79
GAPVD1-217ENST00000479511 PKDCCQ504Y2 493 aa10.13□□□□□ -0.79
GAPVD1-217ENST00000479511 TM4SF20Q53R12 229 aa10.13□□□□□ -0.79
GAPVD1-217ENST00000479511 FERMT3Q86UX7 667 aa10.13□□□□□ -0.79
GAPVD1-217ENST00000479511 FAM35AQ86V20 835 aa10.13□□□□□ -0.79
GAPVD1-217ENST00000479511 DHX37Q8IY37 1157 aaKnown RBP10.13□□□□□ -0.79
GAPVD1-217ENST00000479511 CCDC155Q8N6L0 562 aa10.13□□□□□ -0.79
GAPVD1-217ENST00000479511 ZSWIM2Q8NEG5 633 aa10.13□□□□□ -0.79
GAPVD1-217ENST00000479511 JDP2Q8WYK2 163 aa10.13□□□□□ -0.79
GAPVD1-217ENST00000479511 SPATA9Q9BWV2 254 aa10.13□□□□□ -0.79
GAPVD1-217ENST00000479511 ZC3H12CQ9C0D7 883 aaKnown RBP10.13□□□□□ -0.79
GAPVD1-217ENST00000479511 PCDHB10Q9UN67 800 aa10.13□□□□□ -0.79
GAPVD1-217ENST00000479511 PLAAQ9Y263 795 aa10.13□□□□□ -0.79
GAPVD1-217ENST00000479511 DNAJA2O60884 412 aa10.12□□□□□ -0.79
GAPVD1-217ENST00000479511 MAP4K4O95819 1239 aaPredicted RBP10.12□□□□□ -0.79
GAPVD1-217ENST00000479511 INPP5AQ14642 412 aa10.12□□□□□ -0.79
GAPVD1-217ENST00000479511 CBX2Q14781 532 aaPredicted RBP10.12□□□□□ -0.79
GAPVD1-217ENST00000479511 PCSK7Q16549 785 aa10.12□□□□□ -0.79
GAPVD1-217ENST00000479511 HSP90AB2PQ58FF8 381 aa10.12□□□□□ -0.79
GAPVD1-217ENST00000479511 TMEM67Q5HYA8 995 aa10.12□□□□□ -0.79
GAPVD1-217ENST00000479511 WIPI1Q5MNZ9 446 aaPredicted RBP10.12□□□□□ -0.79
GAPVD1-217ENST00000479511 OVOS1Q6IE37 1185 aa10.12□□□□□ -0.79
GAPVD1-217ENST00000479511 UNC5AQ6ZN44 842 aa10.12□□□□□ -0.79
GAPVD1-217ENST00000479511 THNSL2Q86YJ6 484 aa10.12□□□□□ -0.79
GAPVD1-217ENST00000479511 TAB3Q8N5C8 712 aaPredicted RBP10.12□□□□□ -0.79
GAPVD1-217ENST00000479511 GPBAR1Q8TDU6 330 aa10.12□□□□□ -0.79
GAPVD1-217ENST00000479511 SMG9Q9H0W8 520 aaKnown RBP10.12□□□□□ -0.79
GAPVD1-217ENST00000479511 PRR12Q9ULL5 1215 aa10.12□□□□□ -0.79
GAPVD1-217ENST00000479511 KCNQ2O43526 872 aa10.11□□□□□ -0.79
GAPVD1-217ENST00000479511 IKBKEQ14164 716 aa10.11□□□□□ -0.79
GAPVD1-217ENST00000479511 SLC10A6Q3KNW5 377 aa10.11□□□□□ -0.79
GAPVD1-217ENST00000479511 LRFN4Q6PJG9 635 aa10.11□□□□□ -0.79
GAPVD1-217ENST00000479511 VHLLQ6RSH7 139 aa10.11□□□□□ -0.79
GAPVD1-217ENST00000479511 EEPD1Q7L9B9 569 aa10.11□□□□□ -0.79
GAPVD1-217ENST00000479511 FMNL3Q8IVF7 1028 aa10.11□□□□□ -0.79
GAPVD1-217ENST00000479511 MICALL1Q8N3F8 863 aa10.11□□□□□ -0.79
GAPVD1-217ENST00000479511 ATG4CQ96DT6 458 aa10.11□□□□□ -0.79
GAPVD1-217ENST00000479511 HOMER2Q9NSB8 354 aa10.11□□□□□ -0.79
GAPVD1-217ENST00000479511 REV1Q9UBZ9 1251 aa10.11□□□□□ -0.79
GAPVD1-217ENST00000479511 PCDHA4Q9UN74 947 aa10.11□□□□□ -0.79
GAPVD1-217ENST00000479511 SLC6A14Q9UN76 642 aa10.11□□□□□ -0.79
GAPVD1-217ENST00000479511 THRAP3Q9Y2W1 955 aaKnown RBP10.11□□□□□ -0.79
GAPVD1-217ENST00000479511 C2CD2LO14523 706 aa10.1□□□□□ -0.79
GAPVD1-217ENST00000479511 EPHA1P21709 976 aa10.1□□□□□ -0.79
GAPVD1-217ENST00000479511 AP3B2Q13367 1082 aa10.1□□□□□ -0.79
GAPVD1-217ENST00000479511 ODR4Q5SWX8 454 aa10.1□□□□□ -0.79
GAPVD1-217ENST00000479511 PLPPR2Q96GM1 343 aa10.1□□□□□ -0.79
GAPVD1-217ENST00000479511 ATP8A1Q9Y2Q0 1164 aa10.1□□□□□ -0.79
GAPVD1-217ENST00000479511 A0A087X0B3 334 aa10.09□□□□□ -0.79
GAPVD1-217ENST00000479511 FAM86C2PA6NEL3 165 aa10.09□□□□□ -0.79
GAPVD1-217ENST00000479511 SLC22A31A6NKX4 558 aa10.09□□□□□ -0.79
GAPVD1-217ENST00000479511 IRS4O14654 1257 aaPredicted RBP10.09□□□□□ -0.79
GAPVD1-217ENST00000479511 DGAT1O75907 488 aa10.09□□□□□ -0.79
GAPVD1-217ENST00000479511 ECEL1O95672 775 aa10.09□□□□□ -0.79
GAPVD1-217ENST00000479511 MYCLP1P12525 358 aaPredicted RBP10.09□□□□□ -0.79
GAPVD1-217ENST00000479511 NME1P15531 152 aaKnown RBP10.09□□□□□ -0.79
GAPVD1-217ENST00000479511 CNGA1P29973 690 aa10.09□□□□□ -0.79
GAPVD1-217ENST00000479511 PCBP4P57723 403 aaKnown RBP10.09□□□□□ -0.79
GAPVD1-217ENST00000479511 NCAPHQ15003 741 aa10.09□□□□□ -0.79
GAPVD1-217ENST00000479511 ZNF468Q5VIY5 522 aaPredicted RBP10.09□□□□□ -0.79
GAPVD1-217ENST00000479511 FOXB2Q5VYV0 432 aa10.09□□□□□ -0.79
GAPVD1-217ENST00000479511 NIM1KQ8IY84 436 aa10.09□□□□□ -0.79
GAPVD1-217ENST00000479511 ZBTB38Q8NAP3 1195 aaPredicted RBP10.09□□□□□ -0.79
GAPVD1-217ENST00000479511 KLHL6Q8WZ60 621 aa10.09□□□□□ -0.79
GAPVD1-217ENST00000479511 NINJ1Q92982 152 aa10.09□□□□□ -0.79
GAPVD1-217ENST00000479511 MFSD3Q96ES6 412 aa10.09□□□□□ -0.79
GAPVD1-217ENST00000479511 LPIN3Q9BQK8 851 aa10.09□□□□□ -0.79
GAPVD1-217ENST00000479511 GMIPQ9P107 970 aa10.09□□□□□ -0.79
GAPVD1-217ENST00000479511 SUSD5O60279 629 aa10.08□□□□□ -0.8
GAPVD1-217ENST00000479511 SIN3BO75182 1162 aa10.08□□□□□ -0.8
GAPVD1-217ENST00000479511 ZNF787Q6DD87 383 aa10.08□□□□□ -0.8
GAPVD1-217ENST00000479511 ELMSAN1Q6PJG2 1045 aa10.08□□□□□ -0.8
GAPVD1-217ENST00000479511 RAVER1Q8IY67 606 aaKnown RBP10.08□□□□□ -0.8
GAPVD1-217ENST00000479511 SLC9A7Q96T83 725 aa10.08□□□□□ -0.8
GAPVD1-217ENST00000479511 GPR25O00155 361 aa10.07□□□□□ -0.8
GAPVD1-217ENST00000479511 AXIN1O15169 862 aa10.07□□□□□ -0.8
GAPVD1-217ENST00000479511 ITGA6P23229 1130 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms