RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 SEPT6Q14141 434 aa7.28□□□□□ -1.24
SSR1-207ENST00000479485 ZNF394Q53GI3 561 aa7.28□□□□□ -1.24
SSR1-207ENST00000479485 C9orf131Q5VYM1 1079 aa7.28□□□□□ -1.24
SSR1-207ENST00000479485 NUTM2GQ5VZR2 741 aa7.28□□□□□ -1.24
SSR1-207ENST00000479485 METTL16Q86W50 562 aaKnown RBP7.28□□□□□ -1.24
SSR1-207ENST00000479485 RELL1Q8IUW5 271 aa7.28□□□□□ -1.24
SSR1-207ENST00000479485 PHC3Q8NDX5 983 aa7.28□□□□□ -1.24
SSR1-207ENST00000479485 GPBAR1Q8TDU6 330 aa7.28□□□□□ -1.24
SSR1-207ENST00000479485 GAL3ST3Q96A11 431 aa7.28□□□□□ -1.24
SSR1-207ENST00000479485 WDR89Q96FK6 387 aaPredicted RBP7.28□□□□□ -1.24
SSR1-207ENST00000479485 ACSBG1Q96GR2 724 aa7.28□□□□□ -1.24
SSR1-207ENST00000479485 MEGF10Q96KG7 1140 aa7.28□□□□□ -1.24
SSR1-207ENST00000479485 RHOVQ96L33 236 aa7.28□□□□□ -1.24
SSR1-207ENST00000479485 RSRP1Q9BUV0 290 aa7.28□□□□□ -1.24
SSR1-207ENST00000479485 WDR18Q9BV38 432 aa7.28□□□□□ -1.24
SSR1-207ENST00000479485 CYP8B1Q9UNU6 501 aa7.28□□□□□ -1.24
SSR1-207ENST00000479485 PCDHB5Q9Y5E4 795 aa7.28□□□□□ -1.24
SSR1-207ENST00000479485 PCDHGB7Q9Y5F8 929 aa7.28□□□□□ -1.24
SSR1-207ENST00000479485 MINDY4BA8MYZ0 360 aa7.27□□□□□ -1.25
SSR1-207ENST00000479485 HNRNPUQ00839 825 aaKnown RBP eCLIP7.27□□□□□ -1.25
SSR1-207ENST00000479485 EXOSC6Q5RKV6 272 aaKnown RBP7.27□□□□□ -1.25
SSR1-207ENST00000479485 FDX2Q6P4F2 183 aa7.27□□□□□ -1.25
SSR1-207ENST00000479485 Q6ZS46 218 aa7.27□□□□□ -1.25
SSR1-207ENST00000479485 USP48Q86UV5 1035 aa7.27□□□□□ -1.25
SSR1-207ENST00000479485 TMEM74Q96NL1 305 aa7.27□□□□□ -1.25
SSR1-207ENST00000479485 MEGF11A6BM72 1044 aa7.26□□□□□ -1.25
SSR1-207ENST00000479485 AOC2O75106 756 aa7.26□□□□□ -1.25
SSR1-207ENST00000479485 FAM160A1Q05DH4 1040 aa7.26□□□□□ -1.25
SSR1-207ENST00000479485 AKAP4Q5JQC9 854 aa7.26□□□□□ -1.25
SSR1-207ENST00000479485 NT5DC4Q86YG4 428 aa7.26□□□□□ -1.25
SSR1-207ENST00000479485 MIR1-1HGQ9H1L0 117 aa7.26□□□□□ -1.25
SSR1-207ENST00000479485 CYP4F12Q9HCS2 524 aa7.26□□□□□ -1.25
SSR1-207ENST00000479485 RAD18Q9NS91 495 aa7.26□□□□□ -1.25
SSR1-207ENST00000479485 CACNA2D2Q9NY47 1150 aa7.26□□□□□ -1.25
SSR1-207ENST00000479485 AP4E1Q9UPM8 1137 aa7.26□□□□□ -1.25
SSR1-207ENST00000479485 PF4P02776 101 aa7.25□□□□□ -1.25
SSR1-207ENST00000479485 ADH5P11766 374 aa7.25□□□□□ -1.25
SSR1-207ENST00000479485 PREPP48147 710 aa7.25□□□□□ -1.25
SSR1-207ENST00000479485 PTPN11Q06124 597 aaPredicted RBP7.25□□□□□ -1.25
SSR1-207ENST00000479485 CAMK2GQ13555 558 aaPredicted RBP7.25□□□□□ -1.25
SSR1-207ENST00000479485 KIF4BQ2VIQ3 1234 aa7.25□□□□□ -1.25
SSR1-207ENST00000479485 ANKRD34AQ69YU3 496 aa7.25□□□□□ -1.25
SSR1-207ENST00000479485 TRIM42Q8IWZ5 723 aa7.25□□□□□ -1.25
SSR1-207ENST00000479485 SMG8Q8ND04 991 aaKnown RBP7.25□□□□□ -1.25
SSR1-207ENST00000479485 CEP41Q9BYV8 373 aa7.25□□□□□ -1.25
SSR1-207ENST00000479485 SUGCTQ9HAC7 445 aa7.25□□□□□ -1.25
SSR1-207ENST00000479485 IGSF5Q9NSI5 407 aa7.25□□□□□ -1.25
SSR1-207ENST00000479485 TIAF1O95411 115 aa7.24□□□□□ -1.25
SSR1-207ENST00000479485 DRD2P14416 443 aa7.24□□□□□ -1.25
SSR1-207ENST00000479485 LMNB2Q03252 620 aa7.24□□□□□ -1.25
SSR1-207ENST00000479485 SNAP47Q5SQN1 464 aa7.24□□□□□ -1.25
SSR1-207ENST00000479485 SCARA3Q6AZY7 606 aa7.24□□□□□ -1.25
SSR1-207ENST00000479485 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.24□□□□□ -1.25
SSR1-207ENST00000479485 BNC2Q6ZN30 1099 aaPredicted RBP7.24□□□□□ -1.25
SSR1-207ENST00000479485 KRTAP9-8Q9BYQ0 159 aa7.24□□□□□ -1.25
SSR1-207ENST00000479485 PCDHA4Q9UN74 947 aa7.24□□□□□ -1.25
SSR1-207ENST00000479485 PCDHGC5Q9Y5F6 944 aa7.24□□□□□ -1.25
SSR1-207ENST00000479485 TMPRSS2O15393 492 aa7.23□□□□□ -1.25
SSR1-207ENST00000479485 TGFB1P01137 390 aa7.23□□□□□ -1.25
SSR1-207ENST00000479485 RAD51AP2Q09MP3 1159 aa7.23□□□□□ -1.25
SSR1-207ENST00000479485 SLC51AQ86UW1 340 aa7.23□□□□□ -1.25
SSR1-207ENST00000479485 C12orf50Q8NA57 414 aaPredicted RBP7.23□□□□□ -1.25
SSR1-207ENST00000479485 UBL7Q96S82 380 aaPredicted RBP7.23□□□□□ -1.25
SSR1-207ENST00000479485 ADAMTS1Q9UHI8 967 aa7.23□□□□□ -1.25
SSR1-207ENST00000479485 SART1O43290 800 aaKnown RBP7.22□□□□□ -1.25
SSR1-207ENST00000479485 F13A1P00488 732 aa7.22□□□□□ -1.25
SSR1-207ENST00000479485 GARTP22102 1010 aa7.22□□□□□ -1.25
SSR1-207ENST00000479485 ERCC5P28715 1186 aaPredicted RBP7.22□□□□□ -1.25
SSR1-207ENST00000479485 EIF4A3P38919 411 aaKnown RBP7.22□□□□□ -1.25
SSR1-207ENST00000479485 RACK1P63244 317 aaKnown RBP7.22□□□□□ -1.25
SSR1-207ENST00000479485 ID3Q02535 119 aa7.22□□□□□ -1.25
SSR1-207ENST00000479485 SOX4Q06945 474 aaPredicted RBP7.22□□□□□ -1.25
SSR1-207ENST00000479485 FBLN7Q53RD9 439 aa7.22□□□□□ -1.25
SSR1-207ENST00000479485 DZIP1LQ8IYY4 767 aaKnown RBP7.22□□□□□ -1.25
SSR1-207ENST00000479485 GOLM1Q8NBJ4 401 aa7.22□□□□□ -1.25
SSR1-207ENST00000479485 C2CD4AQ8NCU7 369 aaPredicted RBP7.22□□□□□ -1.25
SSR1-207ENST00000479485 JARID2Q92833 1246 aaPredicted RBP7.22□□□□□ -1.25
SSR1-207ENST00000479485 ADGRE2Q9UHX3 823 aa7.22□□□□□ -1.25
SSR1-207ENST00000479485 DDX41Q9UJV9 622 aaKnown RBP7.22□□□□□ -1.25
SSR1-207ENST00000479485 PPP1R9AQ9ULJ8 1098 aa7.22□□□□□ -1.25
SSR1-207ENST00000479485 DCDC2CA8MYV0 355 aa7.21□□□□□ -1.26
SSR1-207ENST00000479485 GAS2O43903 313 aaKnown RBP7.21□□□□□ -1.26
SSR1-207ENST00000479485 SLFN14P0C7P3 912 aa7.21□□□□□ -1.26
SSR1-207ENST00000479485 CDK8P49336 464 aa7.21□□□□□ -1.26
SSR1-207ENST00000479485 WIPI1Q5MNZ9 446 aaPredicted RBP7.21□□□□□ -1.26
SSR1-207ENST00000479485 FBXL19Q6PCT2 694 aa7.21□□□□□ -1.26
SSR1-207ENST00000479485 LRFN4Q6PJG9 635 aa7.21□□□□□ -1.26
SSR1-207ENST00000479485 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.21□□□□□ -1.26
SSR1-207ENST00000479485 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.21□□□□□ -1.26
SSR1-207ENST00000479485 SUPT16HQ9Y5B9 1047 aaKnown RBP7.21□□□□□ -1.26
SSR1-207ENST00000479485 ACTL7BQ9Y614 415 aa7.21□□□□□ -1.26
SSR1-207ENST00000479485 SYNGAP1Q96PV0 1343 aa7.21□□□□□ -1.26
SSR1-207ENST00000479485 INPP5AQ14642 412 aa7.2□□□□□ -1.26
SSR1-207ENST00000479485 UVSSAQ2YD98 709 aa7.2□□□□□ -1.26
SSR1-207ENST00000479485 ZC3H12AQ5D1E8 599 aaKnown RBP7.2□□□□□ -1.26
SSR1-207ENST00000479485 DYMQ7RTS9 669 aa7.2□□□□□ -1.26
SSR1-207ENST00000479485 CCDC84Q86UT8 332 aaPredicted RBP7.2□□□□□ -1.26
SSR1-207ENST00000479485 KIAA0825Q8IV33 1275 aa7.2□□□□□ -1.26
SSR1-207ENST00000479485 ZNF654Q8IZM8 581 aa7.2□□□□□ -1.26
SSR1-207ENST00000479485 ZNF296Q8WUU4 475 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms