RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 HIF1AQ16665 826 aa8.49□□□□□ -1.05
HOXB3-209ENST00000478644 SUSD3Q96L08 255 aa8.49□□□□□ -1.05
HOXB3-209ENST00000478644 PRR12Q9ULL5 1215 aa8.49□□□□□ -1.05
HOXB3-209ENST00000478644 MYOM1P52179 1685 aa8.49□□□□□ -1.05
HOXB3-209ENST00000478644 IGSF1Q8N6C5 1336 aa8.49□□□□□ -1.05
HOXB3-209ENST00000478644 PKD1L3Q7Z443 1732 aa8.49□□□□□ -1.05
HOXB3-209ENST00000478644 MAP2P11137 1827 aaKnown RBP8.48□□□□□ -1.05
HOXB3-209ENST00000478644 LOC102724428A0A0B4J2F2 783 aa8.48□□□□□ -1.05
HOXB3-209ENST00000478644 PIK3R2O00459 728 aa8.48□□□□□ -1.05
HOXB3-209ENST00000478644 ITGB2P05107 769 aa8.48□□□□□ -1.05
HOXB3-209ENST00000478644 SIK1P57059 783 aa8.48□□□□□ -1.05
HOXB3-209ENST00000478644 PCBP4P57723 403 aaKnown RBP8.48□□□□□ -1.05
HOXB3-209ENST00000478644 SFSWAPQ12872 951 aaKnown RBP8.48□□□□□ -1.05
HOXB3-209ENST00000478644 EIF4A2Q14240 407 aaKnown RBP8.48□□□□□ -1.05
HOXB3-209ENST00000478644 C1orf141Q5JVX7 400 aa8.48□□□□□ -1.05
HOXB3-209ENST00000478644 COL23A1Q86Y22 540 aaPredicted RBP8.48□□□□□ -1.05
HOXB3-209ENST00000478644 PIGBQ92521 554 aa8.48□□□□□ -1.05
HOXB3-209ENST00000478644 POLR3GLQ9BT43 218 aa8.48□□□□□ -1.05
HOXB3-209ENST00000478644 SHANK3Q9BYB0 1731 aa8.48□□□□□ -1.05
HOXB3-209ENST00000478644 KIF7Q2M1P5 1343 aa8.48□□□□□ -1.05
HOXB3-209ENST00000478644 ADARB2-AS1A8MUL3 147 aa8.47□□□□□ -1.05
HOXB3-209ENST00000478644 TYRO3Q06418 890 aa8.47□□□□□ -1.05
HOXB3-209ENST00000478644 PLA2G4EQ3MJ16 856 aa8.47□□□□□ -1.05
HOXB3-209ENST00000478644 CHSY3Q70JA7 882 aa8.47□□□□□ -1.05
HOXB3-209ENST00000478644 NLGN1Q8N2Q7 840 aa8.47□□□□□ -1.05
HOXB3-209ENST00000478644 ZNF280CQ8ND82 737 aa8.47□□□□□ -1.05
HOXB3-209ENST00000478644 HINFPQ9BQA5 517 aa8.47□□□□□ -1.05
HOXB3-209ENST00000478644 RGPD2P0DJD1 1756 aa8.47□□□□□ -1.05
HOXB3-209ENST00000478644 ELOA3CA0A087WX78 387 aaPredicted RBP8.46□□□□□ -1.06
HOXB3-209ENST00000478644 ELOA3DA6NLF2 546 aaPredicted RBP8.46□□□□□ -1.06
HOXB3-209ENST00000478644 GNB5O14775 395 aa8.46□□□□□ -1.06
HOXB3-209ENST00000478644 AMPD1P23109 780 aa8.46□□□□□ -1.06
HOXB3-209ENST00000478644 COL8A1P27658 744 aa8.46□□□□□ -1.06
HOXB3-209ENST00000478644 WEE1P30291 646 aa8.46□□□□□ -1.06
HOXB3-209ENST00000478644 MTHFSP49914 203 aa8.46□□□□□ -1.06
HOXB3-209ENST00000478644 RTN1Q16799 776 aa8.46□□□□□ -1.06
HOXB3-209ENST00000478644 ELOA3BQ3SY89 546 aa8.46□□□□□ -1.06
HOXB3-209ENST00000478644 TRAPPC3LQ5T215 181 aa8.46□□□□□ -1.06
HOXB3-209ENST00000478644 IER5Q5VY09 327 aa8.46□□□□□ -1.06
HOXB3-209ENST00000478644 SYT9Q86SS6 491 aa8.46□□□□□ -1.06
HOXB3-209ENST00000478644 ELOA3Q8NG57 546 aa8.46□□□□□ -1.06
HOXB3-209ENST00000478644 TNFRSF25Q93038 417 aa8.46□□□□□ -1.06
HOXB3-209ENST00000478644 RRAGCQ9HB90 399 aa8.46□□□□□ -1.06
HOXB3-209ENST00000478644 BRD7Q9NPI1 651 aa8.46□□□□□ -1.06
HOXB3-209ENST00000478644 RTCBQ9Y3I0 505 aaKnown RBP8.46□□□□□ -1.06
HOXB3-209ENST00000478644 CHD4Q14839 1912 aa8.46□□□□□ -1.06
HOXB3-209ENST00000478644 C5P01031 1676 aa8.46□□□□□ -1.06
HOXB3-209ENST00000478644 ZNF831Q5JPB2 1677 aa8.46□□□□□ -1.06
HOXB3-209ENST00000478644 CABP4P57796 275 aa8.45□□□□□ -1.06
HOXB3-209ENST00000478644 TGFB2P61812 414 aa8.45□□□□□ -1.06
HOXB3-209ENST00000478644 GRIN2CQ14957 1233 aa8.45□□□□□ -1.06
HOXB3-209ENST00000478644 AKAP4Q5JQC9 854 aa8.45□□□□□ -1.06
HOXB3-209ENST00000478644 GPAT2Q6NUI2 795 aa8.45□□□□□ -1.06
HOXB3-209ENST00000478644 HSH2DQ96JZ2 352 aa8.45□□□□□ -1.06
HOXB3-209ENST00000478644 CEP63Q96MT8 703 aa8.45□□□□□ -1.06
HOXB3-209ENST00000478644 SLC30A3Q99726 388 aa8.45□□□□□ -1.06
HOXB3-209ENST00000478644 EFCC1Q9HA90 598 aa8.45□□□□□ -1.06
HOXB3-209ENST00000478644 NPC1L1Q9UHC9 1359 aa8.45□□□□□ -1.06
HOXB3-209ENST00000478644 TNNT2P45379 298 aaPredicted RBP8.44□□□□□ -1.06
HOXB3-209ENST00000478644 ZNF530Q6P9A1 599 aaPredicted RBP8.44□□□□□ -1.06
HOXB3-209ENST00000478644 BTLAQ7Z6A9 289 aa8.44□□□□□ -1.06
HOXB3-209ENST00000478644 DMGDHQ9UI17 866 aaKnown RBP8.44□□□□□ -1.06
HOXB3-209ENST00000478644 KCNH4Q9UQ05 1017 aa8.44□□□□□ -1.06
HOXB3-209ENST00000478644 CNTNAP4Q9C0A0 1308 aa8.44□□□□□ -1.06
HOXB3-209ENST00000478644 KDRP35968 1356 aa8.44□□□□□ -1.06
HOXB3-209ENST00000478644 C4BP0C0L5 1744 aa8.43□□□□□ -1.06
HOXB3-209ENST00000478644 ITGB4P16144 1822 aa8.43□□□□□ -1.06
HOXB3-209ENST00000478644 KRBA1A5PL33 1030 aa8.43□□□□□ -1.06
HOXB3-209ENST00000478644 RFC4P35249 363 aa8.43□□□□□ -1.06
HOXB3-209ENST00000478644 ZEB1P37275 1124 aaPredicted RBP8.43□□□□□ -1.06
HOXB3-209ENST00000478644 SPEM2Q0P670 501 aa8.43□□□□□ -1.06
HOXB3-209ENST00000478644 ELOAQ14241 798 aaKnown RBP8.43□□□□□ -1.06
HOXB3-209ENST00000478644 FAM200AQ8TCP9 573 aa8.43□□□□□ -1.06
HOXB3-209ENST00000478644 ATG3Q9NT62 314 aa8.43□□□□□ -1.06
HOXB3-209ENST00000478644 TAF1LQ8IZX4 1826 aa8.43□□□□□ -1.06
HOXB3-209ENST00000478644 RPS6KA4O75676 772 aa8.42□□□□□ -1.06
HOXB3-209ENST00000478644 ALAS2P22557 587 aa8.42□□□□□ -1.06
HOXB3-209ENST00000478644 IL13P35225 146 aa8.42□□□□□ -1.06
HOXB3-209ENST00000478644 SULT6B1Q6IMI4 303 aa8.42□□□□□ -1.06
HOXB3-209ENST00000478644 TEX13AQ9BXU3 409 aaPredicted RBP8.42□□□□□ -1.06
HOXB3-209ENST00000478644 SUV39H2Q9H5I1 410 aa8.42□□□□□ -1.06
HOXB3-209ENST00000478644 CCDC87Q9NVE4 849 aa8.42□□□□□ -1.06
HOXB3-209ENST00000478644 NOP53Q9NZM5 478 aaKnown RBP8.42□□□□□ -1.06
HOXB3-209ENST00000478644 ASAP1Q9ULH1 1129 aa8.42□□□□□ -1.06
HOXB3-209ENST00000478644 BCS1LQ9Y276 419 aa8.42□□□□□ -1.06
HOXB3-209ENST00000478644 TGFBR3LH3BV60 316 aa8.41□□□□□ -1.06
HOXB3-209ENST00000478644 MSTNO14793 375 aa8.41□□□□□ -1.06
HOXB3-209ENST00000478644 DIAPH1O60610 1272 aaKnown RBP8.41□□□□□ -1.06
HOXB3-209ENST00000478644 PROCP04070 461 aa8.41□□□□□ -1.06
HOXB3-209ENST00000478644 LINC00116Q8NCU8 138 aa8.41□□□□□ -1.06
HOXB3-209ENST00000478644 MYO19Q96H55 970 aa8.41□□□□□ -1.06
HOXB3-209ENST00000478644 CFAP53Q96M91 514 aa8.41□□□□□ -1.06
HOXB3-209ENST00000478644 SPOCK3Q9BQ16 436 aa8.41□□□□□ -1.06
HOXB3-209ENST00000478644 C11orf16Q9NQ32 467 aa8.41□□□□□ -1.06
HOXB3-209ENST00000478644 PRDM6Q9NQX0 595 aa8.41□□□□□ -1.06
HOXB3-209ENST00000478644 C1QTNF8P60827 252 aa8.4□□□□□ -1.06
HOXB3-209ENST00000478644 NUDCQ9Y266 331 aa8.4□□□□□ -1.06
HOXB3-209ENST00000478644 TUBGCP6Q96RT7 1819 aa8.4□□□□□ -1.07
HOXB3-209ENST00000478644 A0A087WZG4 1122 aa8.39□□□□□ -1.07
HOXB3-209ENST00000478644 RFX1P22670 979 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms