RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 BCL7CQ8WUZ0 217 aaPredicted RBP7.25□□□□□ -1.25
CDC42BPA-212ENST00000478573 PCDHGC5Q9Y5F6 944 aa7.25□□□□□ -1.25
CDC42BPA-212ENST00000478573 LEFTY1O75610 366 aa7.24□□□□□ -1.25
CDC42BPA-212ENST00000478573 PLCB3Q01970 1234 aa7.24□□□□□ -1.25
CDC42BPA-212ENST00000478573 BNIP3Q12983 259 aa7.24□□□□□ -1.25
CDC42BPA-212ENST00000478573 PDZD3Q86UT5 571 aa7.24□□□□□ -1.25
CDC42BPA-212ENST00000478573 STK11IPQ8N1F8 1099 aa7.24□□□□□ -1.25
CDC42BPA-212ENST00000478573 NETO1Q8TDF5 533 aa7.24□□□□□ -1.25
CDC42BPA-212ENST00000478573 ASIC4Q96FT7 647 aa7.24□□□□□ -1.25
CDC42BPA-212ENST00000478573 ARNTP27540 789 aa7.23□□□□□ -1.25
CDC42BPA-212ENST00000478573 MAPK8P45983 427 aa7.23□□□□□ -1.25
CDC42BPA-212ENST00000478573 TPTE2Q6XPS3 522 aa7.23□□□□□ -1.25
CDC42BPA-212ENST00000478573 SPRED2Q7Z698 418 aa7.23□□□□□ -1.25
CDC42BPA-212ENST00000478573 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.23□□□□□ -1.25
CDC42BPA-212ENST00000478573 GPBAR1Q8TDU6 330 aa7.23□□□□□ -1.25
CDC42BPA-212ENST00000478573 ISL2Q96A47 359 aa7.23□□□□□ -1.25
CDC42BPA-212ENST00000478573 EMILIN2Q9BXX0 1053 aa7.23□□□□□ -1.25
CDC42BPA-212ENST00000478573 PICK1Q9NRD5 415 aa7.23□□□□□ -1.25
CDC42BPA-212ENST00000478573 PCOLCE2Q9UKZ9 415 aa7.23□□□□□ -1.25
CDC42BPA-212ENST00000478573 TREHO43280 583 aa7.22□□□□□ -1.25
CDC42BPA-212ENST00000478573 NEFMP07197 916 aa7.22□□□□□ -1.25
CDC42BPA-212ENST00000478573 NME2P22392 152 aa7.22□□□□□ -1.25
CDC42BPA-212ENST00000478573 DSC3Q14574 896 aa7.22□□□□□ -1.25
CDC42BPA-212ENST00000478573 ENOX2Q16206 610 aaKnown RBP7.22□□□□□ -1.25
CDC42BPA-212ENST00000478573 TOP6BLQ8N6T0 577 aa7.22□□□□□ -1.25
CDC42BPA-212ENST00000478573 GNEQ9Y223 722 aaKnown RBP7.22□□□□□ -1.25
CDC42BPA-212ENST00000478573 CSADQ9Y600 493 aa7.22□□□□□ -1.25
CDC42BPA-212ENST00000478573 FBXO24O75426 580 aa7.21□□□□□ -1.26
CDC42BPA-212ENST00000478573 BRD1O95696 1058 aa7.21□□□□□ -1.26
CDC42BPA-212ENST00000478573 JUNBP17275 347 aaPredicted RBP7.21□□□□□ -1.26
CDC42BPA-212ENST00000478573 ITIH2P19823 946 aa7.21□□□□□ -1.26
CDC42BPA-212ENST00000478573 CD96P40200 585 aa7.21□□□□□ -1.26
CDC42BPA-212ENST00000478573 ZNF792Q3KQV3 632 aa7.21□□□□□ -1.26
CDC42BPA-212ENST00000478573 OGFOD2Q6N063 350 aa7.21□□□□□ -1.26
CDC42BPA-212ENST00000478573 MISP3Q96FF7 219 aa7.21□□□□□ -1.26
CDC42BPA-212ENST00000478573 DUSP23Q9BVJ7 150 aa7.21□□□□□ -1.26
CDC42BPA-212ENST00000478573 U3KQE9 123 aa7.21□□□□□ -1.26
CDC42BPA-212ENST00000478573 PATL2C9JE40 543 aaKnown RBP7.2□□□□□ -1.26
CDC42BPA-212ENST00000478573 ITGB5P18084 799 aa7.2□□□□□ -1.26
CDC42BPA-212ENST00000478573 IFI16Q16666 785 aaKnown RBP7.2□□□□□ -1.26
CDC42BPA-212ENST00000478573 ZC3H12AQ5D1E8 599 aaKnown RBP7.2□□□□□ -1.26
CDC42BPA-212ENST00000478573 MPRIPQ6WCQ1 1025 aa7.2□□□□□ -1.26
CDC42BPA-212ENST00000478573 WFDC3Q8IUB2 231 aa7.2□□□□□ -1.26
CDC42BPA-212ENST00000478573 NISCHQ9Y2I1 1504 aa7.2□□□□□ -1.26
CDC42BPA-212ENST00000478573 DCDC2CA8MYV0 355 aa7.19□□□□□ -1.26
CDC42BPA-212ENST00000478573 CD8BP10966 210 aa7.19□□□□□ -1.26
CDC42BPA-212ENST00000478573 GSTT1P30711 240 aa7.19□□□□□ -1.26
CDC42BPA-212ENST00000478573 ERVK-24P63145 666 aa7.19□□□□□ -1.26
CDC42BPA-212ENST00000478573 PPM1JQ5JR12 505 aa7.19□□□□□ -1.26
CDC42BPA-212ENST00000478573 RNF214Q8ND24 703 aa7.19□□□□□ -1.26
CDC42BPA-212ENST00000478573 GRIN3AQ8TCU5 1115 aa7.19□□□□□ -1.26
CDC42BPA-212ENST00000478573 SETDB2Q96T68 719 aa7.19□□□□□ -1.26
CDC42BPA-212ENST00000478573 KRTAP9-9Q9BYP9 154 aa7.19□□□□□ -1.26
CDC42BPA-212ENST00000478573 KRTAP9-4Q9BYQ2 154 aa7.19□□□□□ -1.26
CDC42BPA-212ENST00000478573 CEACAM5P06731 702 aa7.18□□□□□ -1.26
CDC42BPA-212ENST00000478573 KCNA1Q09470 495 aa7.18□□□□□ -1.26
CDC42BPA-212ENST00000478573 AOC3Q16853 763 aa7.18□□□□□ -1.26
CDC42BPA-212ENST00000478573 AEBP1Q8IUX7 1158 aa7.18□□□□□ -1.26
CDC42BPA-212ENST00000478573 C3orf58Q8NDZ4 430 aa7.18□□□□□ -1.26
CDC42BPA-212ENST00000478573 HRASLS5Q96KN8 279 aa7.18□□□□□ -1.26
CDC42BPA-212ENST00000478573 NECAB3Q96P71 396 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-212ENST00000478573 RC3H2Q9HBD1 1191 aaKnown RBP7.18□□□□□ -1.26
CDC42BPA-212ENST00000478573 SAMM50Q9Y512 469 aa7.18□□□□□ -1.26
CDC42BPA-212ENST00000478573 BIN1O00499 593 aa7.17□□□□□ -1.26
CDC42BPA-212ENST00000478573 ENC1O14682 589 aa7.17□□□□□ -1.26
CDC42BPA-212ENST00000478573 PAGE1O75459 146 aa7.17□□□□□ -1.26
CDC42BPA-212ENST00000478573 PRKCQQ04759 706 aa7.17□□□□□ -1.26
CDC42BPA-212ENST00000478573 ZNF252P-AS1Q0IIN9 211 aa7.17□□□□□ -1.26
CDC42BPA-212ENST00000478573 ZSCAN29Q8IWY8 852 aaPredicted RBP7.17□□□□□ -1.26
CDC42BPA-212ENST00000478573 CEP44Q9C0F1 390 aa7.17□□□□□ -1.26
CDC42BPA-212ENST00000478573 PAPLNO95428 1278 aa7.16□□□□□ -1.26
CDC42BPA-212ENST00000478573 FUT4P22083 530 aa7.16□□□□□ -1.26
CDC42BPA-212ENST00000478573 OXCT1P55809 520 aa7.16□□□□□ -1.26
CDC42BPA-212ENST00000478573 LLGL2Q6P1M3 1020 aa7.16□□□□□ -1.26
CDC42BPA-212ENST00000478573 C12orf40Q86WS4 652 aa7.16□□□□□ -1.26
CDC42BPA-212ENST00000478573 PI4K2BQ8TCG2 481 aa7.16□□□□□ -1.26
CDC42BPA-212ENST00000478573 FBF1Q8TES7 1133 aa7.16□□□□□ -1.26
CDC42BPA-212ENST00000478573 OSBPL7Q9BZF2 842 aa7.16□□□□□ -1.26
CDC42BPA-212ENST00000478573 VAV3Q9UKW4 847 aa7.16□□□□□ -1.26
CDC42BPA-212ENST00000478573 WWC3Q9ULE0 1092 aa7.16□□□□□ -1.26
CDC42BPA-212ENST00000478573 PCDHA4Q9UN74 947 aa7.16□□□□□ -1.26
CDC42BPA-212ENST00000478573 TMEM265A0A087WTH1 108 aa7.15□□□□□ -1.26
CDC42BPA-212ENST00000478573 RNASE1P07998 156 aaKnown RBP7.15□□□□□ -1.26
CDC42BPA-212ENST00000478573 BMP6P22004 513 aa7.15□□□□□ -1.26
CDC42BPA-212ENST00000478573 ATP2B2Q01814 1243 aa7.15□□□□□ -1.26
CDC42BPA-212ENST00000478573 UBE3DQ7Z6J8 389 aa7.15□□□□□ -1.26
CDC42BPA-212ENST00000478573 ELMO3Q96BJ8 720 aa7.15□□□□□ -1.26
CDC42BPA-212ENST00000478573 SRCIN1Q9C0H9 1055 aa7.15□□□□□ -1.26
CDC42BPA-212ENST00000478573 MKNK2Q9HBH9 465 aa7.15□□□□□ -1.26
CDC42BPA-212ENST00000478573 PLAGL2Q9UPG8 496 aa7.15□□□□□ -1.26
CDC42BPA-212ENST00000478573 IVNS1ABPQ9Y6Y0 642 aa7.15□□□□□ -1.26
CDC42BPA-212ENST00000478573 TRIM37O94972 964 aa7.14□□□□□ -1.27
CDC42BPA-212ENST00000478573 FMR1Q06787 632 aaKnown RBP eCLIP7.14□□□□□ -1.279e-7■■□□□ 14.1
CDC42BPA-212ENST00000478573 ANGEL2Q5VTE6 544 aaKnown RBP7.14□□□□□ -1.27
CDC42BPA-212ENST00000478573 ALG1LQ6GMV1 187 aa7.14□□□□□ -1.27
CDC42BPA-212ENST00000478573 CDC37L1Q7L3B6 337 aa7.14□□□□□ -1.27
CDC42BPA-212ENST00000478573 GTF2IRD1Q9UHL9 959 aa7.14□□□□□ -1.27
CDC42BPA-212ENST00000478573 ADAMTS6Q9UKP5 1117 aa7.14□□□□□ -1.27
CDC42BPA-212ENST00000478573 PPM1HQ9ULR3 514 aa7.14□□□□□ -1.27
CDC42BPA-212ENST00000478573 PRAMEF27A3QJZ7 478 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms