RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 TXNRD1Q16881 649 aa7.89□□□□□ -1.15
LDB3-206ENST00000477489 ADCK5Q3MIX3 580 aa7.89□□□□□ -1.15
LDB3-206ENST00000477489 OSBP2Q969R2 916 aa7.89□□□□□ -1.15
LDB3-206ENST00000477489 NACAP1Q9BZK3 213 aa7.89□□□□□ -1.15
LDB3-206ENST00000477489 LRRC4BQ9NT99 713 aa7.89□□□□□ -1.15
LDB3-206ENST00000477489 FAM198AQ9UFP1 575 aa7.89□□□□□ -1.15
LDB3-206ENST00000477489 SRP68Q9UHB9 627 aaKnown RBP7.89□□□□□ -1.15
LDB3-206ENST00000477489 SMC3Q9UQE7 1217 aa7.89□□□□□ -1.15
LDB3-206ENST00000477489 MYO5AQ9Y4I1 1855 aaKnown RBP7.88□□□□□ -1.15
LDB3-206ENST00000477489 XDHP47989 1333 aa7.88□□□□□ -1.15
LDB3-206ENST00000477489 PATL2C9JE40 543 aaKnown RBP7.88□□□□□ -1.15
LDB3-206ENST00000477489 M0R2C6 588 aa7.88□□□□□ -1.15
LDB3-206ENST00000477489 NPHP1O15259 732 aa7.88□□□□□ -1.15
LDB3-206ENST00000477489 DHX16O60231 1041 aaKnown RBP7.88□□□□□ -1.15
LDB3-206ENST00000477489 IDH1O75874 414 aaKnown RBP7.88□□□□□ -1.15
LDB3-206ENST00000477489 BBOX1O75936 387 aa7.88□□□□□ -1.15
LDB3-206ENST00000477489 BAG4O95429 457 aaKnown RBP7.88□□□□□ -1.15
LDB3-206ENST00000477489 PRELPP51888 382 aa7.88□□□□□ -1.15
LDB3-206ENST00000477489 HMGN5P82970 282 aaKnown RBP7.88□□□□□ -1.15
LDB3-206ENST00000477489 EXOSC10Q01780 885 aaKnown RBP7.88□□□□□ -1.15
LDB3-206ENST00000477489 TRDNQ13061 729 aa7.88□□□□□ -1.15
LDB3-206ENST00000477489 CSPP1Q1MSJ5 1256 aa7.88□□□□□ -1.15
LDB3-206ENST00000477489 COL13A1Q5TAT6 717 aaPredicted RBP7.88□□□□□ -1.15
LDB3-206ENST00000477489 SPTY2D1Q68D10 685 aaPredicted RBP7.88□□□□□ -1.15
LDB3-206ENST00000477489 PRR5LQ6MZQ0 368 aa7.88□□□□□ -1.15
LDB3-206ENST00000477489 GIMAP6Q6P9H5 292 aa7.88□□□□□ -1.15
LDB3-206ENST00000477489 BICDL1Q6ZP65 573 aa7.88□□□□□ -1.15
LDB3-206ENST00000477489 FBXO33Q7Z6M2 555 aa7.88□□□□□ -1.15
LDB3-206ENST00000477489 VPS37DQ86XT2 251 aa7.88□□□□□ -1.15
LDB3-206ENST00000477489 NCOA7Q8NI08 942 aa7.88□□□□□ -1.15
LDB3-206ENST00000477489 AIDAQ96BJ3 306 aa7.88□□□□□ -1.15
LDB3-206ENST00000477489 ZNF274Q96GC6 653 aaPredicted RBP7.88□□□□□ -1.15
LDB3-206ENST00000477489 RBM17Q96I25 401 aaKnown RBP7.88□□□□□ -1.15
LDB3-206ENST00000477489 CRAMP1Q96RY5 1269 aa7.88□□□□□ -1.15
LDB3-206ENST00000477489 SEC62Q99442 399 aaKnown RBP7.88□□□□□ -1.15
LDB3-206ENST00000477489 CNNM2Q9H8M5 875 aa7.88□□□□□ -1.15
LDB3-206ENST00000477489 PIH1D3Q9NQM4 214 aaKnown RBP7.88□□□□□ -1.15
LDB3-206ENST00000477489 ZNF532Q9HCE3 1301 aa7.87□□□□□ -1.15
LDB3-206ENST00000477489 E7EWF7 191 aa7.87□□□□□ -1.15
LDB3-206ENST00000477489 ZNF213O14771 459 aa7.87□□□□□ -1.15
LDB3-206ENST00000477489 TRAK2O60296 914 aa7.87□□□□□ -1.15
LDB3-206ENST00000477489 MBD3O95983 291 aa7.87□□□□□ -1.15
LDB3-206ENST00000477489 FGAP02671 866 aa7.87□□□□□ -1.15
LDB3-206ENST00000477489 SERPINB2P05120 415 aa7.87□□□□□ -1.15
LDB3-206ENST00000477489 HIBADHP31937 336 aaKnown RBP7.87□□□□□ -1.15
LDB3-206ENST00000477489 MCM5P33992 734 aa7.87□□□□□ -1.15
LDB3-206ENST00000477489 RCAN1P53805 252 aa7.87□□□□□ -1.15
LDB3-206ENST00000477489 TOB2Q14106 344 aaPredicted RBP7.87□□□□□ -1.15
LDB3-206ENST00000477489 KLHL40Q2TBA0 621 aa7.87□□□□□ -1.15
LDB3-206ENST00000477489 CCDC129Q6ZRS4 1044 aa7.87□□□□□ -1.15
LDB3-206ENST00000477489 NYAP1Q6ZVC0 841 aa7.87□□□□□ -1.15
LDB3-206ENST00000477489 RPGRQ92834 1020 aaKnown RBP7.87□□□□□ -1.15
LDB3-206ENST00000477489 CELF1Q92879 486 aaKnown RBP7.87□□□□□ -1.15
LDB3-206ENST00000477489 GTF3C6Q969F1 213 aa7.87□□□□□ -1.15
LDB3-206ENST00000477489 LRCH3Q96II8 777 aa7.87□□□□□ -1.15
LDB3-206ENST00000477489 STRBPQ96SI9 672 aaKnown RBP7.87□□□□□ -1.15
LDB3-206ENST00000477489 PUS7LQ9H0K6 701 aaKnown RBP7.87□□□□□ -1.15
LDB3-206ENST00000477489 RNF41Q9H4P4 317 aaPredicted RBP7.87□□□□□ -1.15
LDB3-206ENST00000477489 WBP1LQ9NX94 342 aa7.87□□□□□ -1.15
LDB3-206ENST00000477489 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.87□□□□□ -1.15
LDB3-206ENST00000477489 PODXL2Q9NZ53 605 aa7.87□□□□□ -1.15
LDB3-206ENST00000477489 NDUFB9Q9Y6M9 179 aa7.87□□□□□ -1.15
LDB3-206ENST00000477489 CACNA1SQ13698 1873 aa7.87□□□□□ -1.15
LDB3-206ENST00000477489 TAF1P21675 1872 aa7.86□□□□□ -1.15
LDB3-206ENST00000477489 SMAPO00193 183 aa7.86□□□□□ -1.15
LDB3-206ENST00000477489 STX6O43752 255 aa7.86□□□□□ -1.15
LDB3-206ENST00000477489 PFKFB2O60825 505 aa7.86□□□□□ -1.15
LDB3-206ENST00000477489 ATP2B4P23634 1241 aa7.86□□□□□ -1.15
LDB3-206ENST00000477489 MLLT3P42568 568 aaPredicted RBP7.86□□□□□ -1.15
LDB3-206ENST00000477489 KCNQ4P56696 695 aa7.86□□□□□ -1.15
LDB3-206ENST00000477489 FGD1P98174 961 aa7.86□□□□□ -1.15
LDB3-206ENST00000477489 ME3Q16798 604 aa7.86□□□□□ -1.15
LDB3-206ENST00000477489 RALYLQ86SE5 291 aaKnown RBP7.86□□□□□ -1.15
LDB3-206ENST00000477489 TMEM87AQ8NBN3 555 aa7.86□□□□□ -1.15
LDB3-206ENST00000477489 HELBQ8NG08 1087 aaPredicted RBP7.86□□□□□ -1.15
LDB3-206ENST00000477489 WDR66Q8TBY9 1149 aa7.86□□□□□ -1.15
LDB3-206ENST00000477489 TMEM87BQ96K49 555 aa7.86□□□□□ -1.15
LDB3-206ENST00000477489 FAM84BQ96KN1 310 aaPredicted RBP7.86□□□□□ -1.15
LDB3-206ENST00000477489 BRIP1Q9BX63 1249 aa7.86□□□□□ -1.15
LDB3-206ENST00000477489 KRT23Q9C075 422 aa7.86□□□□□ -1.15
LDB3-206ENST00000477489 LRP2BPQ9P2M1 347 aa7.86□□□□□ -1.15
LDB3-206ENST00000477489 RBM27Q9P2N5 1060 aaKnown RBP7.86□□□□□ -1.15
LDB3-206ENST00000477489 TPCN1Q9ULQ1 816 aa7.86□□□□□ -1.15
LDB3-206ENST00000477489 LTBP1Q14766 1721 aa7.86□□□□□ -1.15
LDB3-206ENST00000477489 COL4A1P02462 1669 aa7.86□□□□□ -1.15
LDB3-206ENST00000477489 IRS2Q9Y4H2 1338 aa7.85□□□□□ -1.15
LDB3-206ENST00000477489 C3orf80F5H4A9 247 aa7.85□□□□□ -1.15
LDB3-206ENST00000477489 POLRMTO00411 1230 aaKnown RBP7.85□□□□□ -1.15
LDB3-206ENST00000477489 FOXP2O15409 715 aa7.85□□□□□ -1.15
LDB3-206ENST00000477489 ZSCAN22P10073 491 aaPredicted RBP7.85□□□□□ -1.15
LDB3-206ENST00000477489 GSTO1P78417 241 aa7.85□□□□□ -1.15
LDB3-206ENST00000477489 PLCB2Q00722 1185 aa7.85□□□□□ -1.15
LDB3-206ENST00000477489 PPP2R5BQ15173 497 aa7.85□□□□□ -1.15
LDB3-206ENST00000477489 L1TD1Q5T7N2 865 aaKnown RBP7.85□□□□□ -1.15
LDB3-206ENST00000477489 PI16Q6UXB8 463 aa7.85□□□□□ -1.15
LDB3-206ENST00000477489 Q6ZUG5 572 aa7.85□□□□□ -1.15
LDB3-206ENST00000477489 STOX1Q6ZVD7 989 aa7.85□□□□□ -1.15
LDB3-206ENST00000477489 ZNF804AQ7Z570 1209 aa7.85□□□□□ -1.15
LDB3-206ENST00000477489 MB21D2Q8IYB1 491 aaPredicted RBP7.85□□□□□ -1.15
LDB3-206ENST00000477489 TNS4Q8IZW8 715 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms