RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 AP3B2Q13367 1082 aa8.49□□□□□ -1.05
CDKN1B-204ENST00000477087 PDE3AQ14432 1141 aa8.49□□□□□ -1.05
CDKN1B-204ENST00000477087 LRRIQ1Q96JM4 1722 aa8.49□□□□□ -1.05
CDKN1B-204ENST00000477087 HFM1A2PYH4 1435 aa8.48□□□□□ -1.05
CDKN1B-204ENST00000477087 ADCY10Q96PN6 1610 aa8.48□□□□□ -1.05
CDKN1B-204ENST00000477087 TREHO43280 583 aa8.48□□□□□ -1.05
CDKN1B-204ENST00000477087 COBLO75128 1261 aa8.48□□□□□ -1.05
CDKN1B-204ENST00000477087 TGFB1P01137 390 aa8.48□□□□□ -1.05
CDKN1B-204ENST00000477087 ADH5P11766 374 aa8.48□□□□□ -1.05
CDKN1B-204ENST00000477087 FCGRTP55899 365 aa8.48□□□□□ -1.05
CDKN1B-204ENST00000477087 HNRNPUQ00839 825 aaKnown RBP eCLIP8.48□□□□□ -1.05
CDKN1B-204ENST00000477087 NFKBIBQ15653 356 aa8.48□□□□□ -1.05
CDKN1B-204ENST00000477087 AKAP4Q5JQC9 854 aa8.48□□□□□ -1.05
CDKN1B-204ENST00000477087 PAOXQ6QHF9 649 aa8.48□□□□□ -1.05
CDKN1B-204ENST00000477087 ZDHHC13Q8IUH4 622 aa8.48□□□□□ -1.05
CDKN1B-204ENST00000477087 TRIM56Q9BRZ2 755 aaKnown RBP8.48□□□□□ -1.05
CDKN1B-204ENST00000477087 PLCH2O75038 1416 aa8.47□□□□□ -1.05
CDKN1B-204ENST00000477087 FAM95CA0A1B0GW59 222 aa8.47□□□□□ -1.05
CDKN1B-204ENST00000477087 CTSBP07858 339 aa8.47□□□□□ -1.05
CDKN1B-204ENST00000477087 ZNF157P51786 506 aaPredicted RBP8.47□□□□□ -1.05
CDKN1B-204ENST00000477087 DSC3Q14574 896 aa8.47□□□□□ -1.05
CDKN1B-204ENST00000477087 EFCAB2Q5VUJ9 269 aa8.47□□□□□ -1.05
CDKN1B-204ENST00000477087 PI16Q6UXB8 463 aa8.47□□□□□ -1.05
CDKN1B-204ENST00000477087 C2CD4AQ8NCU7 369 aaPredicted RBP8.47□□□□□ -1.05
CDKN1B-204ENST00000477087 GLIS3Q8NEA6 775 aa8.47□□□□□ -1.05
CDKN1B-204ENST00000477087 SHKBP1Q8TBC3 707 aa8.47□□□□□ -1.05
CDKN1B-204ENST00000477087 MFSD14AQ96MC6 490 aa8.47□□□□□ -1.05
CDKN1B-204ENST00000477087 TRAIPQ9BWF2 469 aa8.47□□□□□ -1.05
CDKN1B-204ENST00000477087 GPN3Q9UHW5 284 aaPredicted RBP8.47□□□□□ -1.05
CDKN1B-204ENST00000477087 ARAP3Q8WWN8 1544 aa8.46□□□□□ -1.05
CDKN1B-204ENST00000477087 XRCC5P13010 732 aaKnown RBP8.46□□□□□ -1.06
CDKN1B-204ENST00000477087 MAPK8P45983 427 aa8.46□□□□□ -1.06
CDKN1B-204ENST00000477087 ENOX2Q16206 610 aaKnown RBP8.46□□□□□ -1.06
CDKN1B-204ENST00000477087 CDPF1Q6NVV7 123 aa8.46□□□□□ -1.06
CDKN1B-204ENST00000477087 DYMQ7RTS9 669 aa8.46□□□□□ -1.06
CDKN1B-204ENST00000477087 FBLIM1Q8WUP2 373 aa8.46□□□□□ -1.06
CDKN1B-204ENST00000477087 BCO2Q9BYV7 579 aa8.46□□□□□ -1.06
CDKN1B-204ENST00000477087 AP4E1Q9UPM8 1137 aa8.46□□□□□ -1.06
CDKN1B-204ENST00000477087 ABCC5O15440 1437 aa8.46□□□□□ -1.06
CDKN1B-204ENST00000477087 PTPRKQ15262 1439 aa8.46□□□□□ -1.06
CDKN1B-204ENST00000477087 PLEKHH2Q8IVE3 1493 aa8.45□□□□□ -1.06
CDKN1B-204ENST00000477087 WDR64B1ANS9 1081 aa8.45□□□□□ -1.06
CDKN1B-204ENST00000477087 ECEL1O95672 775 aa8.45□□□□□ -1.06
CDKN1B-204ENST00000477087 TSPY4P0CV99 314 aa8.45□□□□□ -1.06
CDKN1B-204ENST00000477087 TSPY10P0CW01 314 aa8.45□□□□□ -1.06
CDKN1B-204ENST00000477087 PPP2R3AQ06190 1150 aa8.45□□□□□ -1.06
CDKN1B-204ENST00000477087 INTS5Q6P9B9 1019 aaKnown RBP8.45□□□□□ -1.06
CDKN1B-204ENST00000477087 ATG3Q9NT62 314 aa8.45□□□□□ -1.06
CDKN1B-204ENST00000477087 RAB6AP20340 208 aa8.44□□□□□ -1.06
CDKN1B-204ENST00000477087 CD97P48960 835 aa8.44□□□□□ -1.06
CDKN1B-204ENST00000477087 FAAP100Q0VG06 881 aa8.44□□□□□ -1.06
CDKN1B-204ENST00000477087 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.44□□□□□ -1.06
CDKN1B-204ENST00000477087 FBXL6Q8N531 539 aa8.44□□□□□ -1.06
CDKN1B-204ENST00000477087 AKAP2Q9Y2D5 859 aa8.44□□□□□ -1.06
CDKN1B-204ENST00000477087 ACTL7BQ9Y614 415 aa8.44□□□□□ -1.06
CDKN1B-204ENST00000477087 RAB3GAP2Q9H2M9 1393 aa8.44□□□□□ -1.06
CDKN1B-204ENST00000477087 NAIPQ13075 1403 aa8.44□□□□□ -1.06
CDKN1B-204ENST00000477087 MBD5Q9P267 1494 aa8.44□□□□□ -1.06
CDKN1B-204ENST00000477087 WDR7Q9Y4E6 1490 aa8.44□□□□□ -1.06
CDKN1B-204ENST00000477087 PTPN23Q9H3S7 1636 aa8.43□□□□□ -1.06
CDKN1B-204ENST00000477087 AOC2O75106 756 aa8.43□□□□□ -1.06
CDKN1B-204ENST00000477087 ATP2B2Q01814 1243 aa8.43□□□□□ -1.06
CDKN1B-204ENST00000477087 MAP7Q14244 749 aa8.43□□□□□ -1.06
CDKN1B-204ENST00000477087 NXPE4Q6UWF7 544 aa8.43□□□□□ -1.06
CDKN1B-204ENST00000477087 FBF1Q8TES7 1133 aa8.43□□□□□ -1.06
CDKN1B-204ENST00000477087 ASB16Q96NS5 453 aa8.43□□□□□ -1.06
CDKN1B-204ENST00000477087 OSBPL1AQ9BXW6 950 aa8.43□□□□□ -1.06
CDKN1B-204ENST00000477087 ZC3H12CQ9C0D7 883 aaKnown RBP8.43□□□□□ -1.06
CDKN1B-204ENST00000477087 TMEM39AQ9NV64 488 aa8.43□□□□□ -1.06
CDKN1B-204ENST00000477087 ZNF644Q9H582 1327 aaPredicted RBP8.43□□□□□ -1.06
CDKN1B-204ENST00000477087 DHX57Q6P158 1386 aaKnown RBP8.43□□□□□ -1.06
CDKN1B-204ENST00000477087 DAPK1P53355 1430 aa8.43□□□□□ -1.06
CDKN1B-204ENST00000477087 NCOA1Q15788 1441 aa8.43□□□□□ -1.06
CDKN1B-204ENST00000477087 KIF14Q15058 1648 aa8.43□□□□□ -1.06
CDKN1B-204ENST00000477087 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.42□□□□□ -1.06
CDKN1B-204ENST00000477087 PRR19A6NJB7 356 aa8.42□□□□□ -1.06
CDKN1B-204ENST00000477087 ASPAP45381 313 aa8.42□□□□□ -1.06
CDKN1B-204ENST00000477087 EZH1Q92800 747 aaPredicted RBP8.42□□□□□ -1.06
CDKN1B-204ENST00000477087 WDR18Q9BV38 432 aa8.42□□□□□ -1.06
CDKN1B-204ENST00000477087 ADGRL2O95490 1459 aa8.42□□□□□ -1.06
CDKN1B-204ENST00000477087 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.41□□□□□ -1.062e-7■□□□□ 10.2
CDKN1B-204ENST00000477087 SHANK2Q9UPX8 1470 aa8.41□□□□□ -1.06
CDKN1B-204ENST00000477087 ASXL2Q76L83 1435 aa8.41□□□□□ -1.06
CDKN1B-204ENST00000477087 ANKRD30AQ9BXX3 1397 aa8.41□□□□□ -1.06
CDKN1B-204ENST00000477087 LIG1P18858 919 aa8.41□□□□□ -1.06
CDKN1B-204ENST00000477087 ITGAEP38570 1179 aa8.41□□□□□ -1.06
CDKN1B-204ENST00000477087 FMR1Q06787 632 aaKnown RBP eCLIP8.41□□□□□ -1.06
CDKN1B-204ENST00000477087 ALG1LQ6GMV1 187 aa8.41□□□□□ -1.06
CDKN1B-204ENST00000477087 TBC1D32Q96NH3 1257 aa8.41□□□□□ -1.06
CDKN1B-204ENST00000477087 LEMD3Q9Y2U8 911 aa8.41□□□□□ -1.06
CDKN1B-204ENST00000477087 KIAA1324LA8MWY0 1029 aaPredicted RBP8.4□□□□□ -1.06
CDKN1B-204ENST00000477087 F13BP05160 661 aa8.4□□□□□ -1.06
CDKN1B-204ENST00000477087 GSTP1P09211 210 aaKnown RBP8.4□□□□□ -1.06
CDKN1B-204ENST00000477087 SLFN14P0C7P3 912 aa8.4□□□□□ -1.06
CDKN1B-204ENST00000477087 CPSF6Q16630 551 aaKnown RBP eCLIP8.4□□□□□ -1.06
CDKN1B-204ENST00000477087 CYB5RLQ6IPT4 315 aa8.4□□□□□ -1.06
CDKN1B-204ENST00000477087 METTL22Q9BUU2 404 aaPredicted RBP8.4□□□□□ -1.06
CDKN1B-204ENST00000477087 SRCIN1Q9C0H9 1055 aa8.4□□□□□ -1.06
CDKN1B-204ENST00000477087 CCDC86Q9H6F5 360 aaKnown RBP8.4□□□□□ -1.06
CDKN1B-204ENST00000477087 FAM105AQ9NUU6 356 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms