RNA–Protein interactions for RNA: ENST00000476784.5

TTC3-215, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 7,425 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-215ENST00000476784 TNRQ92752 1358 aa7.49□□□□□ -1.21
TTC3-215ENST00000476784 NOL3O60936 208 aaKnown RBP7.49□□□□□ -1.21
TTC3-215ENST00000476784 PRPHP41219 470 aa7.49□□□□□ -1.21
TTC3-215ENST00000476784 SPECC1LQ69YQ0 1117 aa7.49□□□□□ -1.21
TTC3-215ENST00000476784 SEPT14Q6ZU15 432 aa7.49□□□□□ -1.21
TTC3-215ENST00000476784 TMTC2Q8N394 836 aa7.49□□□□□ -1.21
TTC3-215ENST00000476784 ZSCAN12O43309 604 aa7.49□□□□□ -1.21
TTC3-215ENST00000476784 TNNI1P19237 187 aa7.49□□□□□ -1.21
TTC3-215ENST00000476784 SUPT20HL1Q3ZLR7 823 aa7.49□□□□□ -1.21
TTC3-215ENST00000476784 EEPD1Q7L9B9 569 aa7.49□□□□□ -1.21
TTC3-215ENST00000476784 RBM28Q9NW13 759 aaKnown RBP7.49□□□□□ -1.21
TTC3-215ENST00000476784 NSD3Q9BZ95 1437 aa7.49□□□□□ -1.21
TTC3-215ENST00000476784 FAM102BQ5T8I3 360 aa7.49□□□□□ -1.21
TTC3-215ENST00000476784 UBXN4Q92575 508 aa7.49□□□□□ -1.21
TTC3-215ENST00000476784 SLC4A7Q9Y6M7 1214 aa7.49□□□□□ -1.21
TTC3-215ENST00000476784 SYNDIG1LA6NDD5 238 aa7.48□□□□□ -1.21
TTC3-215ENST00000476784 EPB41P11171 864 aaKnown RBP7.48□□□□□ -1.21
TTC3-215ENST00000476784 RXRAP19793 462 aa7.48□□□□□ -1.21
TTC3-215ENST00000476784 DCUN1D2Q6PH85 259 aa7.48□□□□□ -1.21
TTC3-215ENST00000476784 DCLK2Q8N568 766 aa7.48□□□□□ -1.21
TTC3-215ENST00000476784 TMEM57Q8N5G2 664 aa7.48□□□□□ -1.21
TTC3-215ENST00000476784 COA7Q96BR5 231 aa7.48□□□□□ -1.21
TTC3-215ENST00000476784 K7ELQ4 463 aaPredicted RBP7.48□□□□□ -1.21
TTC3-215ENST00000476784 TRAK2O60296 914 aa7.48□□□□□ -1.21
TTC3-215ENST00000476784 CCNT1O60563 726 aaKnown RBP7.48□□□□□ -1.21
TTC3-215ENST00000476784 ATF7P17544 494 aaPredicted RBP7.48□□□□□ -1.21
TTC3-215ENST00000476784 DHX58Q96C10 678 aa7.48□□□□□ -1.21
TTC3-215ENST00000476784 MTIF3Q9H2K0 278 aaKnown RBP7.48□□□□□ -1.21
TTC3-215ENST00000476784 ERICH4A6NGS2 130 aa7.48□□□□□ -1.21
TTC3-215ENST00000476784 TSHZ3Q63HK5 1081 aa7.48□□□□□ -1.21
TTC3-215ENST00000476784 KRT27Q7Z3Y8 459 aa7.48□□□□□ -1.21
TTC3-215ENST00000476784 MYLK4Q86YV6 388 aaPredicted RBP7.48□□□□□ -1.21
TTC3-215ENST00000476784 PALM2Q8IXS6 379 aa7.48□□□□□ -1.21
TTC3-215ENST00000476784 RPAP2Q8IXW5 612 aaPredicted RBP7.48□□□□□ -1.21
TTC3-215ENST00000476784 PCDH11XQ9BZA7 1347 aa7.48□□□□□ -1.21
TTC3-215ENST00000476784 PCDH11YQ9BZA8 1340 aa7.48□□□□□ -1.21
TTC3-215ENST00000476784 KRT2P35908 639 aa7.48□□□□□ -1.21
TTC3-215ENST00000476784 IREB2P48200 963 aaKnown RBP7.48□□□□□ -1.21
TTC3-215ENST00000476784 BCAMP50895 628 aa7.48□□□□□ -1.21
TTC3-215ENST00000476784 CEP57Q86XR8 500 aa7.48□□□□□ -1.21
TTC3-215ENST00000476784 MAPKAPK5Q8IW41 473 aa7.48□□□□□ -1.21
TTC3-215ENST00000476784 SELENOSQ9BQE4 189 aa7.48□□□□□ -1.21
TTC3-215ENST00000476784 TRMT1Q9NXH9 659 aaKnown RBP7.48□□□□□ -1.21
TTC3-215ENST00000476784 SYCE3A1L190 88 aa7.48□□□□□ -1.21
TTC3-215ENST00000476784 KIF28PB7ZC32 967 aa7.48□□□□□ -1.21
TTC3-215ENST00000476784 RAD51AP2Q09MP3 1159 aa7.48□□□□□ -1.21
TTC3-215ENST00000476784 TBCCQ15814 346 aa7.48□□□□□ -1.21
TTC3-215ENST00000476784 ZBTB8OSQ8IWT0 167 aa7.48□□□□□ -1.21
TTC3-215ENST00000476784 MROH2BQ7Z745 1585 aa7.48□□□□□ -1.21
TTC3-215ENST00000476784 HEXIM1O94992 359 aaKnown RBP7.47□□□□□ -1.21
TTC3-215ENST00000476784 SLC9A5Q14940 896 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 SRGAP1Q7Z6B7 1085 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 TGFBRAP1Q8WUH2 860 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 CCDC85CA6NKD9 419 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 FBXW10Q5XX13 1052 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 CCDC110Q8TBZ0 833 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 CNKSR1Q969H4 720 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 KCNK9Q9NPC2 374 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 CPSF3Q9UKF6 684 aaKnown RBP7.47□□□□□ -1.21
TTC3-215ENST00000476784 TMEM259Q4ZIN3 620 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 OTUD6AQ7L8S5 288 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 TRIM50Q86XT4 487 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 TEKT1Q969V4 418 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 ZNF653Q96CK0 615 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 ZSWIM4Q9H7M6 989 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 IPO11Q9UI26 975 aaKnown RBP7.47□□□□□ -1.21
TTC3-215ENST00000476784 TAF5LO75529 589 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 RAD17O75943 681 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 KCNJ6P48051 423 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 ARL4DP49703 201 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 KIF11P52732 1056 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 LIN9Q5TKA1 542 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 TMC6Q7Z403 805 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 AFAP1L2Q8N4X5 818 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 CCDC94Q9BW85 323 aaPredicted RBP7.47□□□□□ -1.21
TTC3-215ENST00000476784 CCDC68Q9H2F9 335 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 TSHZ2Q9NRE2 1034 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 DNAJC5BQ9UF47 199 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 ANAPC5Q9UJX4 755 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 KCNH4Q9UQ05 1017 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 SAT1P21673 171 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 CCDC102BQ68D86 513 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 FAM89AQ96GI7 184 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 SPOPO43791 374 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 DTHD1Q6ZMT9 781 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 MYCT1Q8N699 235 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 NEK11Q8NG66 645 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 TRIM56Q9BRZ2 755 aaKnown RBP7.47□□□□□ -1.21
TTC3-215ENST00000476784 UBN2Q6ZU65 1347 aa7.47□□□□□ -1.21
TTC3-215ENST00000476784 RTL9Q8NET4 1388 aa7.46□□□□□ -1.21
TTC3-215ENST00000476784 PSMA7O14818 248 aa7.46□□□□□ -1.21
TTC3-215ENST00000476784 TLR3O15455 904 aaKnown RBP7.46□□□□□ -1.21
TTC3-215ENST00000476784 PPP2R5AQ15172 486 aa7.46□□□□□ -1.21
TTC3-215ENST00000476784 CTR9Q6PD62 1173 aa7.46□□□□□ -1.21
TTC3-215ENST00000476784 INPP5FQ9Y2H2 1132 aa7.46□□□□□ -1.21
TTC3-215ENST00000476784 TBC1D12O60347 775 aa7.46□□□□□ -1.21
TTC3-215ENST00000476784 MCM3P25205 808 aa7.46□□□□□ -1.21
TTC3-215ENST00000476784 COPRSQ9NQ92 184 aa7.46□□□□□ -1.21
TTC3-215ENST00000476784 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.46□□□□□ -1.21
TTC3-215ENST00000476784 RPS6KA2Q15349 733 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms