RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 PICK1Q9NRD5 415 aa20.62■□□□□ 0.89
APOBEC3F-203ENST00000476513 SLC45A1Q9Y2W3 748 aa20.62■□□□□ 0.89
APOBEC3F-203ENST00000476513 AFG3L2Q9Y4W6 797 aa20.62■□□□□ 0.89
APOBEC3F-203ENST00000476513 TNPO2O14787 897 aaKnown RBP20.61■□□□□ 0.89
APOBEC3F-203ENST00000476513 CRISPLD2Q9H0B8 497 aa20.61■□□□□ 0.89
APOBEC3F-203ENST00000476513 EYA2O00167 538 aa20.6■□□□□ 0.89
APOBEC3F-203ENST00000476513 LDHBP07195 334 aaKnown RBP20.6■□□□□ 0.89
APOBEC3F-203ENST00000476513 PAWRQ96IZ0 340 aaKnown RBP20.6■□□□□ 0.89
APOBEC3F-203ENST00000476513 MGAMO43451 1857 aa20.6■□□□□ 0.89
APOBEC3F-203ENST00000476513 SMCR8Q8TEV9 937 aaPredicted RBP20.59■□□□□ 0.89
APOBEC3F-203ENST00000476513 RFX5P48382 616 aaPredicted RBP20.58■□□□□ 0.89
APOBEC3F-203ENST00000476513 RGS3P49796 1198 aa20.58■□□□□ 0.89
APOBEC3F-203ENST00000476513 SH3BP5LQ7L8J4 393 aa20.58■□□□□ 0.89
APOBEC3F-203ENST00000476513 DIS3LQ8TF46 1054 aaKnown RBP20.58■□□□□ 0.89
APOBEC3F-203ENST00000476513 MRS2Q9HD23 443 aa20.58■□□□□ 0.89
APOBEC3F-203ENST00000476513 TAOK2Q9UL54 1235 aa20.58■□□□□ 0.89
APOBEC3F-203ENST00000476513 AK9Q5TCS8 1911 aa20.58■□□□□ 0.88
APOBEC3F-203ENST00000476513 CUL9Q8IWT3 2517 aa20.58■□□□□ 0.88
APOBEC3F-203ENST00000476513 LAMA3Q16787 3333 aa20.58■□□□□ 0.88
APOBEC3F-203ENST00000476513 ENTPD3O75355 529 aa20.57■□□□□ 0.88
APOBEC3F-203ENST00000476513 SLURP2P0DP57 97 aa20.57■□□□□ 0.88
APOBEC3F-203ENST00000476513 MAP3K10Q02779 954 aa20.57■□□□□ 0.88
APOBEC3F-203ENST00000476513 NECAB2Q7Z6G3 386 aa20.57■□□□□ 0.88
APOBEC3F-203ENST00000476513 GDF15Q99988 308 aa20.57■□□□□ 0.88
APOBEC3F-203ENST00000476513 IDI2Q9BXS1 227 aa20.57■□□□□ 0.88
APOBEC3F-203ENST00000476513 USP44Q9H0E7 712 aa20.57■□□□□ 0.88
APOBEC3F-203ENST00000476513 SALL1Q9NSC2 1324 aa20.56■□□□□ 0.88
APOBEC3F-203ENST00000476513 TRIM75PA6NK02 468 aa20.56■□□□□ 0.88
APOBEC3F-203ENST00000476513 BMP8BP34820 402 aa20.56■□□□□ 0.88
APOBEC3F-203ENST00000476513 ATG9AQ7Z3C6 839 aa20.56■□□□□ 0.88
APOBEC3F-203ENST00000476513 ZSCAN29Q8IWY8 852 aaPredicted RBP20.56■□□□□ 0.88
APOBEC3F-203ENST00000476513 ANKRD13CQ8N6S4 541 aa20.56■□□□□ 0.88
APOBEC3F-203ENST00000476513 COA7Q96BR5 231 aa20.56■□□□□ 0.88
APOBEC3F-203ENST00000476513 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.56■□□□□ 0.88
APOBEC3F-203ENST00000476513 LRRFIP2Q9Y608 721 aaKnown RBP20.56■□□□□ 0.88
APOBEC3F-203ENST00000476513 CTNND1O60716 968 aaKnown RBP20.55■□□□□ 0.88
APOBEC3F-203ENST00000476513 MNX1P50219 401 aaPredicted RBP20.55■□□□□ 0.88
APOBEC3F-203ENST00000476513 MRPL50Q8N5N7 158 aaKnown RBP20.55■□□□□ 0.88
APOBEC3F-203ENST00000476513 GNL3LQ9NVN8 582 aaKnown RBP20.55■□□□□ 0.88
APOBEC3F-203ENST00000476513 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.55■□□□□ 0.88
APOBEC3F-203ENST00000476513 AGTPBP1Q9UPW5 1226 aa20.55■□□□□ 0.88
APOBEC3F-203ENST00000476513 RFX7Q2KHR2 1363 aa20.55■□□□□ 0.88
APOBEC3F-203ENST00000476513 DDTLA6NHG4 134 aaPredicted RBP20.54■□□□□ 0.88
APOBEC3F-203ENST00000476513 ATP2B3Q16720 1220 aa20.54■□□□□ 0.88
APOBEC3F-203ENST00000476513 GPR153Q6NV75 609 aa20.54■□□□□ 0.88
APOBEC3F-203ENST00000476513 CCDC84Q86UT8 332 aaPredicted RBP20.54■□□□□ 0.88
APOBEC3F-203ENST00000476513 C7orf61Q8IZ16 206 aa20.54■□□□□ 0.88
APOBEC3F-203ENST00000476513 ZMYND8Q9ULU4 1186 aaPredicted RBP20.54■□□□□ 0.88
APOBEC3F-203ENST00000476513 GAKO14976 1311 aa20.53■□□□□ 0.88
APOBEC3F-203ENST00000476513 FAM110CQ1W6H9 321 aa20.53■□□□□ 0.88
APOBEC3F-203ENST00000476513 TREML2Q5T2D2 321 aa20.53■□□□□ 0.88
APOBEC3F-203ENST00000476513 DEFB123Q8N688 67 aa20.53■□□□□ 0.88
APOBEC3F-203ENST00000476513 ANKLE1Q8NAG6 615 aa20.53■□□□□ 0.88
APOBEC3F-203ENST00000476513 DENND2AQ9ULE3 1009 aa20.53■□□□□ 0.88
APOBEC3F-203ENST00000476513 MYH13Q9UKX3 1938 aa20.53■□□□□ 0.88
APOBEC3F-203ENST00000476513 SEMA3EO15041 775 aa20.52■□□□□ 0.88
APOBEC3F-203ENST00000476513 PHKA1P46020 1223 aa20.52■□□□□ 0.88
APOBEC3F-203ENST00000476513 DDX4Q9NQI0 724 aaKnown RBP20.52■□□□□ 0.88
APOBEC3F-203ENST00000476513 ALPK3Q96L96 1907 aa20.52■□□□□ 0.88
APOBEC3F-203ENST00000476513 DOCK2Q92608 1830 aa20.52■□□□□ 0.88
APOBEC3F-203ENST00000476513 PTPRCP08575 1304 aa20.52■□□□□ 0.87
APOBEC3F-203ENST00000476513 HMGCRP04035 888 aa20.51■□□□□ 0.87
APOBEC3F-203ENST00000476513 Q7L0L9 218 aa20.51■□□□□ 0.87
APOBEC3F-203ENST00000476513 SIL1Q9H173 461 aa20.51■□□□□ 0.87
APOBEC3F-203ENST00000476513 CEP126Q9P2H0 1117 aa20.51■□□□□ 0.87
APOBEC3F-203ENST00000476513 PNMA3Q9UL41 463 aa20.51■□□□□ 0.87
APOBEC3F-203ENST00000476513 COL6A3P12111 3177 aa20.51■□□□□ 0.87
APOBEC3F-203ENST00000476513 CIAO1O76071 339 aa20.5■□□□□ 0.87
APOBEC3F-203ENST00000476513 PICALMQ13492 652 aa20.5■□□□□ 0.87
APOBEC3F-203ENST00000476513 NBPF3Q9H094 633 aa20.5■□□□□ 0.87
APOBEC3F-203ENST00000476513 GJD2Q9UKL4 321 aa20.5■□□□□ 0.87
APOBEC3F-203ENST00000476513 PTPRFP10586 1907 aa20.5■□□□□ 0.87
APOBEC3F-203ENST00000476513 SYN1P17600 705 aa20.49■□□□□ 0.87
APOBEC3F-203ENST00000476513 TRIM32Q13049 653 aa20.49■□□□□ 0.87
APOBEC3F-203ENST00000476513 LRIT3Q3SXY7 679 aa20.49■□□□□ 0.87
APOBEC3F-203ENST00000476513 ZGPATQ8N5A5 531 aaKnown RBP20.49■□□□□ 0.87
APOBEC3F-203ENST00000476513 PROCA1Q8NCQ7 364 aaPredicted RBP20.49■□□□□ 0.87
APOBEC3F-203ENST00000476513 HMX1Q9NP08 348 aaPredicted RBP20.49■□□□□ 0.87
APOBEC3F-203ENST00000476513 FBXO3Q9UK99 471 aa20.49■□□□□ 0.87
APOBEC3F-203ENST00000476513 DOCK3Q8IZD9 2030 aa20.49■□□□□ 0.87
APOBEC3F-203ENST00000476513 RPTORQ8N122 1335 aa20.49■□□□□ 0.87
APOBEC3F-203ENST00000476513 PHIPQ8WWQ0 1821 aa20.48■□□□□ 0.87
APOBEC3F-203ENST00000476513 DOCK1Q14185 1865 aa20.48■□□□□ 0.87
APOBEC3F-203ENST00000476513 ZBTB22O15209 634 aa20.48■□□□□ 0.87
APOBEC3F-203ENST00000476513 BTDP43251 543 aa20.48■□□□□ 0.87
APOBEC3F-203ENST00000476513 MAGEA10P43363 369 aaPredicted RBP20.48■□□□□ 0.87
APOBEC3F-203ENST00000476513 GCLCP48506 637 aaPredicted RBP20.48■□□□□ 0.87
APOBEC3F-203ENST00000476513 CCDC102BQ68D86 513 aa20.48■□□□□ 0.87
APOBEC3F-203ENST00000476513 DZIP1Q86YF9 867 aaKnown RBP20.48■□□□□ 0.87
APOBEC3F-203ENST00000476513 FAM163AQ96GL9 167 aaPredicted RBP20.48■□□□□ 0.87
APOBEC3F-203ENST00000476513 STXBP5LQ9Y2K9 1186 aa20.48■□□□□ 0.87
APOBEC3F-203ENST00000476513 TBC1D12O60347 775 aa20.47■□□□□ 0.87
APOBEC3F-203ENST00000476513 ADORA1P30542 326 aa20.47■□□□□ 0.87
APOBEC3F-203ENST00000476513 SPP2Q13103 211 aa20.47■□□□□ 0.87
APOBEC3F-203ENST00000476513 SLF2Q8IX21 1173 aa20.47■□□□□ 0.87
APOBEC3F-203ENST00000476513 C11orf49Q9H6J7 331 aa20.47■□□□□ 0.87
APOBEC3F-203ENST00000476513 MTMR10Q9NXD2 777 aa20.47■□□□□ 0.87
APOBEC3F-203ENST00000476513 ABCF2Q9UG63 623 aa20.47■□□□□ 0.87
APOBEC3F-203ENST00000476513 FAM196BA6NMK8 535 aa20.46■□□□□ 0.87
APOBEC3F-203ENST00000476513 RASGRF1Q13972 1273 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms