RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 FASTKD5Q7L8L6 764 aaKnown RBP22.55■■□□□ 1.2
RNF220-212ENST00000475378 KLHDC4Q8TBB5 520 aa22.55■■□□□ 1.2
RNF220-212ENST00000475378 WDR66Q8TBY9 1149 aa22.55■■□□□ 1.2
RNF220-212ENST00000475378 GDF15Q99988 308 aa22.55■■□□□ 1.2
RNF220-212ENST00000475378 SPINK5Q9NQ38 1064 aaPredicted RBP22.55■■□□□ 1.2
RNF220-212ENST00000475378 SLC45A1Q9Y2W3 748 aa22.55■■□□□ 1.2
RNF220-212ENST00000475378 IFIT1P09914 478 aaKnown RBP22.54■■□□□ 1.2
RNF220-212ENST00000475378 BMP8BP34820 402 aa22.54■■□□□ 1.2
RNF220-212ENST00000475378 PUM3Q15397 648 aaKnown RBP22.54■■□□□ 1.2
RNF220-212ENST00000475378 ZFPM1Q8IX07 1006 aa22.54■■□□□ 1.2
RNF220-212ENST00000475378 PAWRQ96IZ0 340 aaKnown RBP22.54■■□□□ 1.2
RNF220-212ENST00000475378 AFG3L2Q9Y4W6 797 aa22.54■■□□□ 1.2
RNF220-212ENST00000475378 ZHX2Q9Y6X8 837 aa22.54■■□□□ 1.2
RNF220-212ENST00000475378 PTPRAP18433 802 aa22.53■■□□□ 1.2
RNF220-212ENST00000475378 GPR153Q6NV75 609 aa22.53■■□□□ 1.2
RNF220-212ENST00000475378 SCYL3Q8IZE3 742 aa22.53■■□□□ 1.2
RNF220-212ENST00000475378 TNPO2O14787 897 aaKnown RBP22.52■■□□□ 1.2
RNF220-212ENST00000475378 PRDX5P30044 214 aa22.52■■□□□ 1.2
RNF220-212ENST00000475378 DIS3LQ8TF46 1054 aaKnown RBP22.52■■□□□ 1.2
RNF220-212ENST00000475378 DDX60LQ5H9U9 1706 aaKnown RBP22.51■■□□□ 1.19
RNF220-212ENST00000475378 USP40Q9NVE5 1235 aa22.51■■□□□ 1.19
RNF220-212ENST00000475378 MAP3K10Q02779 954 aa22.5■■□□□ 1.19
RNF220-212ENST00000475378 GADL1Q6ZQY3 521 aa22.5■■□□□ 1.19
RNF220-212ENST00000475378 NECAB2Q7Z6G3 386 aa22.5■■□□□ 1.19
RNF220-212ENST00000475378 SALL2Q9Y467 1007 aaPredicted RBP22.5■■□□□ 1.19
RNF220-212ENST00000475378 PLXNB2O15031 1838 aa22.5■■□□□ 1.19
RNF220-212ENST00000475378 RFX7Q2KHR2 1363 aa22.5■■□□□ 1.19
RNF220-212ENST00000475378 LOC285556D6RIA3 1793 aa22.49■■□□□ 1.19
RNF220-212ENST00000475378 LPIN2Q92539 896 aa22.49■■□□□ 1.19
RNF220-212ENST00000475378 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.49■■□□□ 1.195e-6■■□□□ 13.9
RNF220-212ENST00000475378 PICK1Q9NRD5 415 aa22.49■■□□□ 1.19
RNF220-212ENST00000475378 SLC5A1P13866 664 aa22.48■■□□□ 1.19
RNF220-212ENST00000475378 SH3BP5LQ7L8J4 393 aa22.48■■□□□ 1.19
RNF220-212ENST00000475378 SMCR8Q8TEV9 937 aaPredicted RBP22.48■■□□□ 1.19
RNF220-212ENST00000475378 IDI2Q9BXS1 227 aa22.48■■□□□ 1.19
RNF220-212ENST00000475378 ENTPD3O75355 529 aa22.47■■□□□ 1.19
RNF220-212ENST00000475378 ZEB1P37275 1124 aaPredicted RBP22.47■■□□□ 1.19
RNF220-212ENST00000475378 RFX5P48382 616 aaPredicted RBP22.47■■□□□ 1.19
RNF220-212ENST00000475378 RGS3P49796 1198 aa22.47■■□□□ 1.19
RNF220-212ENST00000475378 C7orf61Q8IZ16 206 aa22.47■■□□□ 1.19
RNF220-212ENST00000475378 DEFB123Q8N688 67 aa22.47■■□□□ 1.19
RNF220-212ENST00000475378 ANKLE1Q8NAG6 615 aa22.47■■□□□ 1.19
RNF220-212ENST00000475378 SALL1Q9NSC2 1324 aa22.47■■□□□ 1.19
RNF220-212ENST00000475378 ATAD5Q96QE3 1844 aa22.47■■□□□ 1.19
RNF220-212ENST00000475378 EYA2O00167 538 aa22.46■■□□□ 1.19
RNF220-212ENST00000475378 LDHBP07195 334 aaKnown RBP22.46■■□□□ 1.19
RNF220-212ENST00000475378 SLURP2P0DP57 97 aa22.46■■□□□ 1.19
RNF220-212ENST00000475378 FAM110CQ1W6H9 321 aa22.46■■□□□ 1.19
RNF220-212ENST00000475378 LRIT3Q3SXY7 679 aa22.46■■□□□ 1.19
RNF220-212ENST00000475378 Q7L0L9 218 aa22.46■■□□□ 1.19
RNF220-212ENST00000475378 ANKRD13CQ8N6S4 541 aa22.46■■□□□ 1.19
RNF220-212ENST00000475378 COA7Q96BR5 231 aa22.46■■□□□ 1.19
RNF220-212ENST00000475378 ZMYND8Q9ULU4 1186 aaPredicted RBP22.46■■□□□ 1.19
RNF220-212ENST00000475378 AGTPBP1Q9UPW5 1226 aa22.46■■□□□ 1.19
RNF220-212ENST00000475378 STXBP5LQ9Y2K9 1186 aa22.46■■□□□ 1.19
RNF220-212ENST00000475378 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.45■■□□□ 1.18
RNF220-212ENST00000475378 TAOK2Q9UL54 1235 aa22.45■■□□□ 1.18
RNF220-212ENST00000475378 DDTLA6NHG4 134 aaPredicted RBP22.44■■□□□ 1.18
RNF220-212ENST00000475378 TRIM75PA6NK02 468 aa22.44■■□□□ 1.18
RNF220-212ENST00000475378 GAKO14976 1311 aa22.44■■□□□ 1.18
RNF220-212ENST00000475378 CTNND1O60716 968 aaKnown RBP22.44■■□□□ 1.18
RNF220-212ENST00000475378 ATG9AQ7Z3C6 839 aa22.44■■□□□ 1.18
RNF220-212ENST00000475378 USP44Q9H0E7 712 aa22.44■■□□□ 1.18
RNF220-212ENST00000475378 MTMR10Q9NXD2 777 aa22.44■■□□□ 1.18
RNF220-212ENST00000475378 LRRFIP2Q9Y608 721 aaKnown RBP22.44■■□□□ 1.18
RNF220-212ENST00000475378 HMGCRP04035 888 aa22.43■■□□□ 1.18
RNF220-212ENST00000475378 TREML2Q5T2D2 321 aa22.43■■□□□ 1.18
RNF220-212ENST00000475378 CCDC84Q86UT8 332 aaPredicted RBP22.43■■□□□ 1.18
RNF220-212ENST00000475378 LAMA2P24043 3122 aaKnown RBP22.43■■□□□ 1.18
RNF220-212ENST00000475378 MAGEA10P43363 369 aaPredicted RBP22.42■■□□□ 1.18
RNF220-212ENST00000475378 TDHQ8IZJ6 230 aa22.42■■□□□ 1.18
RNF220-212ENST00000475378 NBPF3Q9H094 633 aa22.42■■□□□ 1.18
RNF220-212ENST00000475378 DDX4Q9NQI0 724 aaKnown RBP22.42■■□□□ 1.18
RNF220-212ENST00000475378 GJD2Q9UKL4 321 aa22.42■■□□□ 1.18
RNF220-212ENST00000475378 RPTORQ8N122 1335 aa22.41■■□□□ 1.18
RNF220-212ENST00000475378 ZBTB22O15209 634 aa22.41■■□□□ 1.18
RNF220-212ENST00000475378 SYN1P17600 705 aa22.41■■□□□ 1.18
RNF220-212ENST00000475378 TRIM32Q13049 653 aa22.41■■□□□ 1.18
RNF220-212ENST00000475378 ZSCAN29Q8IWY8 852 aaPredicted RBP22.4■■□□□ 1.18
RNF220-212ENST00000475378 PROCA1Q8NCQ7 364 aaPredicted RBP22.4■■□□□ 1.18
RNF220-212ENST00000475378 GNL3LQ9NVN8 582 aaKnown RBP22.4■■□□□ 1.18
RNF220-212ENST00000475378 PNMA3Q9UL41 463 aa22.4■■□□□ 1.18
RNF220-212ENST00000475378 DENND2AQ9ULE3 1009 aa22.4■■□□□ 1.18
RNF220-212ENST00000475378 SEMA3EO15041 775 aa22.39■■□□□ 1.17
RNF220-212ENST00000475378 PHKA1P46020 1223 aa22.39■■□□□ 1.17
RNF220-212ENST00000475378 ATP2B3Q16720 1220 aa22.39■■□□□ 1.17
RNF220-212ENST00000475378 MRPL50Q8N5N7 158 aaKnown RBP22.39■■□□□ 1.17
RNF220-212ENST00000475378 C11orf49Q9H6J7 331 aa22.39■■□□□ 1.17
RNF220-212ENST00000475378 HMX1Q9NP08 348 aaPredicted RBP22.39■■□□□ 1.17
RNF220-212ENST00000475378 OGDHLQ9ULD0 1010 aa22.39■■□□□ 1.17
RNF220-212ENST00000475378 GCLCP48506 637 aaPredicted RBP22.38■■□□□ 1.17
RNF220-212ENST00000475378 FAM163AQ96GL9 167 aaPredicted RBP22.38■■□□□ 1.17
RNF220-212ENST00000475378 VCANP13611 3396 aa22.38■■□□□ 1.17
RNF220-212ENST00000475378 DNAH12Q6ZR08 3092 aa22.37■■□□□ 1.17
RNF220-212ENST00000475378 PFASO15067 1338 aa22.37■■□□□ 1.17
RNF220-212ENST00000475378 PTPRCP08575 1304 aa22.37■■□□□ 1.17
RNF220-212ENST00000475378 TBC1D12O60347 775 aa22.37■■□□□ 1.17
RNF220-212ENST00000475378 FBXO3Q9UK99 471 aa22.37■■□□□ 1.17
RNF220-212ENST00000475378 FRMPD3Q5JV73 1810 aa22.36■■□□□ 1.17
RNF220-212ENST00000475378 CIAO1O76071 339 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms