RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 RAI14Q9P0K7 980 aa14.46□□□□□ -0.1
RNF220-211ENST00000474956 CFAP45Q9UL16 551 aa14.46□□□□□ -0.1
RNF220-211ENST00000474956 BAZ2BQ9UIF8 2168 aaKnown RBP14.46□□□□□ -0.1
RNF220-211ENST00000474956 MARCKSP29966 332 aaPredicted RBP14.45□□□□□ -0.1
RNF220-211ENST00000474956 ANKRD18AQ8IVF6 992 aa14.45□□□□□ -0.1
RNF220-211ENST00000474956 FSIP1Q8NA03 581 aa14.45□□□□□ -0.1
RNF220-211ENST00000474956 CHMP4CQ96CF2 233 aa14.45□□□□□ -0.1
RNF220-211ENST00000474956 GPR101Q96P66 508 aaPredicted RBP14.45□□□□□ -0.1
RNF220-211ENST00000474956 CHD4Q14839 1912 aa14.45□□□□□ -0.1
RNF220-211ENST00000474956 LRMPQ12912 555 aa14.45□□□□□ -0.1
RNF220-211ENST00000474956 FBXL16Q8N461 479 aa14.45□□□□□ -0.1
RNF220-211ENST00000474956 hCG_1642624A0A1W2PR95 340 aa14.44□□□□□ -0.1
RNF220-211ENST00000474956 IFIT3O14879 490 aaKnown RBP14.44□□□□□ -0.1
RNF220-211ENST00000474956 FEZ1Q99689 392 aa14.44□□□□□ -0.1
RNF220-211ENST00000474956 PAXBP1Q9Y5B6 917 aa14.44□□□□□ -0.1
RNF220-211ENST00000474956 ECM29Q5VYK3 1845 aa14.44□□□□□ -0.1
RNF220-211ENST00000474956 NDUFA8P51970 172 aa14.44□□□□□ -0.1
RNF220-211ENST00000474956 AK7Q96M32 723 aa14.44□□□□□ -0.1
RNF220-211ENST00000474956 C16orf45Q96MC5 204 aaPredicted RBP14.44□□□□□ -0.1
RNF220-211ENST00000474956 ALG1Q9BT22 464 aa14.44□□□□□ -0.1
RNF220-211ENST00000474956 NRBP1Q9UHY1 535 aa14.44□□□□□ -0.1
RNF220-211ENST00000474956 BCORQ6W2J9 1755 aa14.44□□□□□ -0.1
RNF220-211ENST00000474956 FAM84BQ96KN1 310 aaPredicted RBP14.44□□□□□ -0.1
RNF220-211ENST00000474956 TOM1O60784 492 aa14.43□□□□□ -0.1
RNF220-211ENST00000474956 TNNT1P13805 278 aa14.43□□□□□ -0.1
RNF220-211ENST00000474956 CDC25BP30305 580 aa14.43□□□□□ -0.1
RNF220-211ENST00000474956 KIF23Q02241 960 aaPredicted RBP14.43□□□□□ -0.1
RNF220-211ENST00000474956 NTRK3Q16288 839 aa14.43□□□□□ -0.1
RNF220-211ENST00000474956 TICAM2Q86XR7 235 aa14.43□□□□□ -0.1
RNF220-211ENST00000474956 ZHX1Q9UKY1 873 aaPredicted RBP14.43□□□□□ -0.1
RNF220-211ENST00000474956 ZMYM6O95789 1325 aa14.43□□□□□ -0.1
RNF220-211ENST00000474956 ENGASEQ8NFI3 743 aa14.43□□□□□ -0.1
RNF220-211ENST00000474956 SMARCC1Q92922 1105 aaPredicted RBP14.43□□□□□ -0.1
RNF220-211ENST00000474956 CLIP2Q9UDT6 1046 aa14.43□□□□□ -0.1
RNF220-211ENST00000474956 ZNF652Q9Y2D9 606 aa14.43□□□□□ -0.1
RNF220-211ENST00000474956 MROH7-TTC4A0A0A0MT08 1334 aa14.43□□□□□ -0.1
RNF220-211ENST00000474956 GOLGA8AA7E2F4 631 aa14.43□□□□□ -0.1
RNF220-211ENST00000474956 ZBTB43O43298 467 aa14.43□□□□□ -0.1
RNF220-211ENST00000474956 U2AF2P26368 475 aaKnown RBP eCLIP14.43□□□□□ -0.1
RNF220-211ENST00000474956 NCBP1Q09161 790 aaKnown RBP14.43□□□□□ -0.1
RNF220-211ENST00000474956 AKNAD1Q5T1N1 836 aa14.43□□□□□ -0.1
RNF220-211ENST00000474956 MYSM1Q5VVJ2 828 aa14.43□□□□□ -0.1
RNF220-211ENST00000474956 ISM2Q6H9L7 571 aa14.43□□□□□ -0.1
RNF220-211ENST00000474956 LINC00301Q8NCQ3 95 aa14.43□□□□□ -0.1
RNF220-211ENST00000474956 SLC26A6Q9BXS9 759 aa14.43□□□□□ -0.1
RNF220-211ENST00000474956 MYH2Q9UKX2 1941 aa14.42□□□□□ -0.1
RNF220-211ENST00000474956 A0A1B0GUL6 1792 aa14.42□□□□□ -0.1
RNF220-211ENST00000474956 LAMB2P55268 1798 aa14.42□□□□□ -0.1
RNF220-211ENST00000474956 SPDYE4A6NLX3 237 aa14.42□□□□□ -0.1
RNF220-211ENST00000474956 WDHD1O75717 1129 aaPredicted RBP14.42□□□□□ -0.1
RNF220-211ENST00000474956 CDC5LQ99459 802 aaKnown RBP14.42□□□□□ -0.1
RNF220-211ENST00000474956 KCNJ14Q9UNX9 436 aa14.42□□□□□ -0.1
RNF220-211ENST00000474956 KRT40Q6A162 431 aa14.42□□□□□ -0.1
RNF220-211ENST00000474956 MFSD6Q6ZSS7 791 aa14.42□□□□□ -0.1
RNF220-211ENST00000474956 NBPF5PQ86XG9 351 aaPredicted RBP14.42□□□□□ -0.1
RNF220-211ENST00000474956 VPS37DQ86XT2 251 aa14.42□□□□□ -0.1
RNF220-211ENST00000474956 ARHGEF1Q92888 912 aaKnown RBP14.42□□□□□ -0.1
RNF220-211ENST00000474956 CCNL1Q9UK58 526 aaPredicted RBP14.42□□□□□ -0.1
RNF220-211ENST00000474956 USP21Q9UK80 565 aa14.42□□□□□ -0.1
RNF220-211ENST00000474956 KIF20AO95235 890 aa14.41□□□□□ -0.1
RNF220-211ENST00000474956 PRDX5P30044 214 aa14.41□□□□□ -0.1
RNF220-211ENST00000474956 VPS72Q15906 364 aa14.41□□□□□ -0.1
RNF220-211ENST00000474956 BTAF1O14981 1849 aa14.41□□□□□ -0.1
RNF220-211ENST00000474956 MYH13Q9UKX3 1938 aa14.41□□□□□ -0.1
RNF220-211ENST00000474956 GOLGA6L19H0YKK7 550 aa14.41□□□□□ -0.1
RNF220-211ENST00000474956 STK38Q15208 465 aa14.41□□□□□ -0.1
RNF220-211ENST00000474956 SPECC1Q5M775 1068 aa14.41□□□□□ -0.1
RNF220-211ENST00000474956 NUP133Q8WUM0 1156 aa14.41□□□□□ -0.1
RNF220-211ENST00000474956 CACTINQ8WUQ7 758 aaKnown RBP14.41□□□□□ -0.1
RNF220-211ENST00000474956 BIN1O00499 593 aa14.41□□□□□ -0.1
RNF220-211ENST00000474956 NMT2O60551 498 aa14.41□□□□□ -0.1
RNF220-211ENST00000474956 CACNA1SQ13698 1873 aa14.41□□□□□ -0.1
RNF220-211ENST00000474956 TPD52L1Q16890 204 aaPredicted RBP14.41□□□□□ -0.1
RNF220-211ENST00000474956 SARM1Q6SZW1 724 aa14.41□□□□□ -0.1
RNF220-211ENST00000474956 CCDC112Q8NEF3 446 aa14.41□□□□□ -0.1
RNF220-211ENST00000474956 ZNF396Q96N95 335 aaPredicted RBP14.41□□□□□ -0.1
RNF220-211ENST00000474956 CLIC6Q96NY7 704 aa14.41□□□□□ -0.1
RNF220-211ENST00000474956 BSDC1Q9NW68 430 aaPredicted RBP14.41□□□□□ -0.1
RNF220-211ENST00000474956 ZNF804BA4D1E1 1349 aa14.41□□□□□ -0.1
RNF220-211ENST00000474956 NEMFO60524 1076 aa14.4□□□□□ -0.1
RNF220-211ENST00000474956 PPARAQ07869 468 aa14.4□□□□□ -0.1
RNF220-211ENST00000474956 SF3B3Q15393 1217 aaKnown RBP14.4□□□□□ -0.1
RNF220-211ENST00000474956 SHISA4Q96DD7 197 aa14.4□□□□□ -0.1
RNF220-211ENST00000474956 RIOK1Q9BRS2 568 aaKnown RBP14.4□□□□□ -0.1
RNF220-211ENST00000474956 RTEL1Q9NZ71 1219 aa14.4□□□□□ -0.1
RNF220-211ENST00000474956 SLC12A7Q9Y666 1083 aa14.4□□□□□ -0.1
RNF220-211ENST00000474956 CTAGE5O15320 804 aa14.4□□□□□ -0.1
RNF220-211ENST00000474956 CYP2D6P10635 497 aa14.4□□□□□ -0.1
RNF220-211ENST00000474956 SF3A1Q15459 793 aaKnown RBP14.4□□□□□ -0.1
RNF220-211ENST00000474956 CLEC4GQ6UXB4 293 aa14.4□□□□□ -0.1
RNF220-211ENST00000474956 SETDB2Q96T68 719 aa14.4□□□□□ -0.1
RNF220-211ENST00000474956 OGFRQ9NZT2 677 aa14.4□□□□□ -0.1
RNF220-211ENST00000474956 RTL9Q8NET4 1388 aa14.4□□□□□ -0.1
RNF220-211ENST00000474956 MAGEB6P1A0A0J9YX57 407 aa14.4□□□□□ -0.11
RNF220-211ENST00000474956 ALX1Q15699 326 aa14.4□□□□□ -0.11
RNF220-211ENST00000474956 CCDC73Q6ZRK6 1079 aa14.4□□□□□ -0.11
RNF220-211ENST00000474956 FMR1NBQ8N0W7 255 aaPredicted RBP14.4□□□□□ -0.11
RNF220-211ENST00000474956 AATFQ9NY61 560 aaKnown RBP eCLIP14.4□□□□□ -0.11
RNF220-211ENST00000474956 CGNQ9P2M7 1197 aaKnown RBP14.4□□□□□ -0.11
RNF220-211ENST00000474956 DHX16O60231 1041 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms