RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 PIK3R2O00459 728 aa9.7□□□□□ -0.86
VPS50-211ENST00000474412 TRIM37O94972 964 aa9.7□□□□□ -0.86
VPS50-211ENST00000474412 GDF11O95390 407 aa9.7□□□□□ -0.86
VPS50-211ENST00000474412 DGKGP49619 791 aa9.7□□□□□ -0.86
VPS50-211ENST00000474412 TMEM151AQ8N4L1 468 aa9.7□□□□□ -0.86
VPS50-211ENST00000474412 KCNH5Q8NCM2 988 aa9.7□□□□□ -0.86
VPS50-211ENST00000474412 MDFIQ99750 246 aa9.7□□□□□ -0.86
VPS50-211ENST00000474412 FAM13BQ9NYF5 915 aa9.7□□□□□ -0.86
VPS50-211ENST00000474412 MEGF6O75095 1541 aa9.7□□□□□ -0.86
VPS50-211ENST00000474412 XYLBO75191 536 aa9.69□□□□□ -0.86
VPS50-211ENST00000474412 SASH3O75995 380 aa9.69□□□□□ -0.86
VPS50-211ENST00000474412 RARAP10276 462 aa9.69□□□□□ -0.86
VPS50-211ENST00000474412 ZAP70P43403 619 aa9.69□□□□□ -0.86
VPS50-211ENST00000474412 GSK3AP49840 483 aa9.69□□□□□ -0.86
VPS50-211ENST00000474412 PTF1AQ7RTS3 328 aa9.69□□□□□ -0.86
VPS50-211ENST00000474412 CCER1Q8TC90 406 aaPredicted RBP9.69□□□□□ -0.86
VPS50-211ENST00000474412 HELQQ8TDG4 1101 aa9.69□□□□□ -0.86
VPS50-211ENST00000474412 C11orf16Q9NQ32 467 aa9.69□□□□□ -0.86
VPS50-211ENST00000474412 TERF2IPQ9NYB0 399 aa9.69□□□□□ -0.86
VPS50-211ENST00000474412 MTMR7Q9Y216 660 aa9.69□□□□□ -0.86
VPS50-211ENST00000474412 C5P01031 1676 aa9.68□□□□□ -0.86
VPS50-211ENST00000474412 CCDC7Q96M83 1385 aa9.68□□□□□ -0.86
VPS50-211ENST00000474412 MAP3K19Q56UN5 1328 aa9.68□□□□□ -0.86
VPS50-211ENST00000474412 GNB5O14775 395 aa9.68□□□□□ -0.86
VPS50-211ENST00000474412 HOXB4P17483 251 aaPredicted RBP9.68□□□□□ -0.86
VPS50-211ENST00000474412 BAG6P46379 1132 aa9.68□□□□□ -0.86
VPS50-211ENST00000474412 TMF1P82094 1093 aa9.68□□□□□ -0.86
VPS50-211ENST00000474412 SF3B2Q13435 895 aaKnown RBP9.68□□□□□ -0.86
VPS50-211ENST00000474412 EZH2Q15910 746 aaKnown RBP9.68□□□□□ -0.86
VPS50-211ENST00000474412 FAM26DQ5JW98 314 aa9.68□□□□□ -0.86
VPS50-211ENST00000474412 B4GALNT3Q6L9W6 998 aa9.68□□□□□ -0.86
VPS50-211ENST00000474412 PIK3R5Q8WYR1 880 aa9.68□□□□□ -0.86
VPS50-211ENST00000474412 PUS7Q96PZ0 661 aaKnown RBP9.68□□□□□ -0.86
VPS50-211ENST00000474412 THRAP3Q9Y2W1 955 aaKnown RBP9.68□□□□□ -0.86
VPS50-211ENST00000474412 TARSP26639 723 aaKnown RBP9.67□□□□□ -0.86
VPS50-211ENST00000474412 PDE3BQ13370 1112 aa9.67□□□□□ -0.86
VPS50-211ENST00000474412 GTF3C2Q8WUA4 911 aaPredicted RBP9.67□□□□□ -0.86
VPS50-211ENST00000474412 GGNBP2Q9H3C7 697 aa9.67□□□□□ -0.86
VPS50-211ENST00000474412 DNAJB12Q9NXW2 375 aaKnown RBP9.67□□□□□ -0.86
VPS50-211ENST00000474412 SLC6A14Q9UN76 642 aa9.67□□□□□ -0.86
VPS50-211ENST00000474412 RTL1A6NKG5 1358 aa9.66□□□□□ -0.86
VPS50-211ENST00000474412 M0R082 166 aa9.66□□□□□ -0.86
VPS50-211ENST00000474412 RRS1Q15050 365 aaKnown RBP9.66□□□□□ -0.86
VPS50-211ENST00000474412 DDB1Q16531 1140 aa9.66□□□□□ -0.86
VPS50-211ENST00000474412 LINC00114Q6XXX2 140 aa9.66□□□□□ -0.86
VPS50-211ENST00000474412 FAM196AQ6ZSG2 479 aa9.66□□□□□ -0.86
VPS50-211ENST00000474412 MARCH10Q8NA82 808 aaPredicted RBP9.66□□□□□ -0.86
VPS50-211ENST00000474412 RETREG2Q8NC44 543 aa9.66□□□□□ -0.86
VPS50-211ENST00000474412 ZNF417Q8TAU3 575 aa9.66□□□□□ -0.86
VPS50-211ENST00000474412 GPR152Q8TDT2 470 aa9.66□□□□□ -0.86
VPS50-211ENST00000474412 ANKRD24Q8TF21 1146 aa9.66□□□□□ -0.86
VPS50-211ENST00000474412 ZNF587Q96SQ5 575 aaPredicted RBP9.66□□□□□ -0.86
VPS50-211ENST00000474412 CARD10Q9BWT7 1032 aa9.66□□□□□ -0.86
VPS50-211ENST00000474412 ZFATQ9P243 1243 aa9.66□□□□□ -0.86
VPS50-211ENST00000474412 MAP3K6O95382 1288 aa9.65□□□□□ -0.86
VPS50-211ENST00000474412 EGFRP00533 1210 aa9.65□□□□□ -0.86
VPS50-211ENST00000474412 ALBP02768 609 aa9.65□□□□□ -0.86
VPS50-211ENST00000474412 HSPA5P11021 654 aaKnown RBP9.65□□□□□ -0.86
VPS50-211ENST00000474412 ARID4AP29374 1257 aaPredicted RBP9.65□□□□□ -0.86
VPS50-211ENST00000474412 DHX32Q7L7V1 743 aaKnown RBP9.65□□□□□ -0.86
VPS50-211ENST00000474412 LTV1Q96GA3 475 aaPredicted RBP9.65□□□□□ -0.86
VPS50-211ENST00000474412 CAMKK2Q96RR4 588 aa9.65□□□□□ -0.86
VPS50-211ENST00000474412 KCNMB2Q9Y691 235 aa9.65□□□□□ -0.86
VPS50-211ENST00000474412 COL24A1Q17RW2 1714 aa9.65□□□□□ -0.87
VPS50-211ENST00000474412 ZBTB39O15060 712 aa9.64□□□□□ -0.87
VPS50-211ENST00000474412 FYB1O15117 783 aa9.64□□□□□ -0.87
VPS50-211ENST00000474412 HOXC9P31274 260 aa9.64□□□□□ -0.87
VPS50-211ENST00000474412 PCSK7Q16549 785 aa9.64□□□□□ -0.87
VPS50-211ENST00000474412 COG3Q96JB2 828 aa9.64□□□□□ -0.87
VPS50-211ENST00000474412 POLR3GLQ9BT43 218 aa9.64□□□□□ -0.87
VPS50-211ENST00000474412 NLRP2Q9NX02 1062 aa9.64□□□□□ -0.87
VPS50-211ENST00000474412 NOP53Q9NZM5 478 aaKnown RBP9.64□□□□□ -0.87
VPS50-211ENST00000474412 STARD13Q9Y3M8 1113 aa9.64□□□□□ -0.87
VPS50-211ENST00000474412 BCL9O00512 1426 aa9.64□□□□□ -0.87
VPS50-211ENST00000474412 APBA3O96018 575 aa9.63□□□□□ -0.87
VPS50-211ENST00000474412 ABL1P00519 1130 aa9.63□□□□□ -0.87
VPS50-211ENST00000474412 PDE4CQ08493 712 aa9.63□□□□□ -0.87
VPS50-211ENST00000474412 R3HDM1Q15032 1099 aaKnown RBP9.63□□□□□ -0.87
VPS50-211ENST00000474412 TRIP4Q15650 581 aaPredicted RBP9.63□□□□□ -0.87
VPS50-211ENST00000474412 PHLDB3Q6NSJ2 640 aa9.63□□□□□ -0.87
VPS50-211ENST00000474412 SUV39H2Q9H5I1 410 aa9.63□□□□□ -0.87
VPS50-211ENST00000474412 SCN11AQ9UI33 1791 aa9.63□□□□□ -0.87
VPS50-211ENST00000474412 PARD3Q8TEW0 1356 aa9.63□□□□□ -0.87
VPS50-211ENST00000474412 UBR3Q6ZT12 1888 aa9.62□□□□□ -0.87
VPS50-211ENST00000474412 CPB1P15086 417 aa9.62□□□□□ -0.87
VPS50-211ENST00000474412 MLLT1Q03111 559 aaPredicted RBP9.62□□□□□ -0.87
VPS50-211ENST00000474412 MTMR3Q13615 1198 aa9.62□□□□□ -0.87
VPS50-211ENST00000474412 FAM35AQ86V20 835 aa9.62□□□□□ -0.87
VPS50-211ENST00000474412 ATCAYQ86WG3 371 aa9.62□□□□□ -0.87
VPS50-211ENST00000474412 MICALL1Q8N3F8 863 aa9.62□□□□□ -0.87
VPS50-211ENST00000474412 USHBP1Q8N6Y0 703 aa9.62□□□□□ -0.87
VPS50-211ENST00000474412 NUDT8Q8WV74 236 aa9.62□□□□□ -0.87
VPS50-211ENST00000474412 IP6K1Q92551 441 aa9.62□□□□□ -0.87
VPS50-211ENST00000474412 DCAF5Q96JK2 942 aa9.62□□□□□ -0.87
VPS50-211ENST00000474412 JPH1Q9HDC5 661 aaPredicted RBP9.62□□□□□ -0.87
VPS50-211ENST00000474412 FNDC3AQ9Y2H6 1198 aaKnown RBP9.62□□□□□ -0.87
VPS50-211ENST00000474412 NCAPD2Q15021 1401 aa9.62□□□□□ -0.87
VPS50-211ENST00000474412 FLT4P35916 1363 aa9.62□□□□□ -0.87
VPS50-211ENST00000474412 KCNQ2O43526 872 aa9.61□□□□□ -0.87
VPS50-211ENST00000474412 PSAPP07602 524 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms