RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 CDAN1Q8IWY9 1227 aa14.97□□□□□ -0.01
DDX56-209ENST00000473924 ZFPM1Q8IX07 1006 aa14.97□□□□□ -0.01
DDX56-209ENST00000473924 AIDAQ96BJ3 306 aa14.97□□□□□ -0.01
DDX56-209ENST00000473924 CRNKL1Q9BZJ0 848 aaKnown RBP14.97□□□□□ -0.01
DDX56-209ENST00000473924 ANGEL1Q9UNK9 670 aaKnown RBP14.97□□□□□ -0.01
DDX56-209ENST00000473924 AK9Q5TCS8 1911 aa14.97□□□□□ -0.01
DDX56-209ENST00000473924 RFX7Q2KHR2 1363 aa14.97□□□□□ -0.01
DDX56-209ENST00000473924 PAPPA2Q9BXP8 1791 aa14.96□□□□□ -0.01
DDX56-209ENST00000473924 MBD4O95243 580 aa14.96□□□□□ -0.01
DDX56-209ENST00000473924 CHGBP05060 677 aa14.96□□□□□ -0.01
DDX56-209ENST00000473924 IREB2P48200 963 aaKnown RBP14.96□□□□□ -0.01
DDX56-209ENST00000473924 DCAF15Q66K64 600 aa14.96□□□□□ -0.01
DDX56-209ENST00000473924 MOB2Q70IA6 237 aa14.96□□□□□ -0.01
DDX56-209ENST00000473924 MAPKAPK5Q8IW41 473 aa14.96□□□□□ -0.01
DDX56-209ENST00000473924 APPBP2Q92624 585 aa14.96□□□□□ -0.01
DDX56-209ENST00000473924 CSRNP1Q96S65 589 aa14.96□□□□□ -0.01
DDX56-209ENST00000473924 RIOK1Q9BRS2 568 aaKnown RBP14.96□□□□□ -0.01
DDX56-209ENST00000473924 OSBPL5Q9H0X9 879 aaPredicted RBP14.96□□□□□ -0.01
DDX56-209ENST00000473924 ARMT1Q9H993 441 aa14.96□□□□□ -0.01
DDX56-209ENST00000473924 MKRN1Q9UHC7 482 aaKnown RBP14.96□□□□□ -0.01
DDX56-209ENST00000473924 FZD1Q9UP38 647 aa14.96□□□□□ -0.01
DDX56-209ENST00000473924 SSC5DA1L4H1 1573 aa14.95□□□□□ -0.02
DDX56-209ENST00000473924 UBE2Q2LH0YL09 131 aa14.95□□□□□ -0.02
DDX56-209ENST00000473924 GRM1Q13255 1194 aa14.95□□□□□ -0.02
DDX56-209ENST00000473924 LCORLQ8N3X6 602 aa14.95□□□□□ -0.02
DDX56-209ENST00000473924 PUS7LQ9H0K6 701 aaKnown RBP14.95□□□□□ -0.02
DDX56-209ENST00000473924 FLT1P17948 1338 aa14.94□□□□□ -0.02
DDX56-209ENST00000473924 DDTLA6NHG4 134 aaPredicted RBP14.94□□□□□ -0.02
DDX56-209ENST00000473924 RASSF10A6NK89 507 aa14.94□□□□□ -0.02
DDX56-209ENST00000473924 TTC22Q5TAA0 569 aa14.94□□□□□ -0.02
DDX56-209ENST00000473924 MIGA2Q7L4E1 593 aa14.94□□□□□ -0.02
DDX56-209ENST00000473924 HHIPL1Q96JK4 782 aa14.94□□□□□ -0.02
DDX56-209ENST00000473924 DHX36Q9H2U1 1008 aaKnown RBP14.94□□□□□ -0.02
DDX56-209ENST00000473924 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.94□□□□□ -0.02
DDX56-209ENST00000473924 USP2O75604 605 aaPredicted RBP14.93□□□□□ -0.02
DDX56-209ENST00000473924 ZNF157P51786 506 aaPredicted RBP14.93□□□□□ -0.02
DDX56-209ENST00000473924 RGMBQ6NW40 437 aa14.93□□□□□ -0.02
DDX56-209ENST00000473924 SH3BP5LQ7L8J4 393 aa14.93□□□□□ -0.02
DDX56-209ENST00000473924 OSBP2Q969R2 916 aa14.93□□□□□ -0.02
DDX56-209ENST00000473924 DDRGK1Q96HY6 314 aa14.93□□□□□ -0.02
DDX56-209ENST00000473924 ZNF341Q9BYN7 854 aa14.93□□□□□ -0.02
DDX56-209ENST00000473924 SAP30BPQ9UHR5 308 aaKnown RBP14.93□□□□□ -0.02
DDX56-209ENST00000473924 FOCADQ5VW36 1801 aa14.92□□□□□ -0.02
DDX56-209ENST00000473924 HLA-DOAP06340 250 aa14.92□□□□□ -0.02
DDX56-209ENST00000473924 ECE1P42892 770 aa14.92□□□□□ -0.02
DDX56-209ENST00000473924 MAP3K11Q16584 847 aa14.92□□□□□ -0.02
DDX56-209ENST00000473924 CYP4F22Q6NT55 531 aa14.92□□□□□ -0.02
DDX56-209ENST00000473924 TICAM2Q86XR7 235 aa14.92□□□□□ -0.02
DDX56-209ENST00000473924 ANKRD13AQ8IZ07 590 aa14.92□□□□□ -0.02
DDX56-209ENST00000473924 SDR42E1Q8WUS8 393 aa14.92□□□□□ -0.02
DDX56-209ENST00000473924 TRIM34Q9BYJ4 488 aa14.92□□□□□ -0.02
DDX56-209ENST00000473924 PALD1Q9ULE6 856 aa14.92□□□□□ -0.02
DDX56-209ENST00000473924 SLC4A4Q9Y6R1 1079 aa14.92□□□□□ -0.02
DDX56-209ENST00000473924 ATRNL1Q5VV63 1379 aa14.92□□□□□ -0.02
DDX56-209ENST00000473924 COL2A1P02458 1487 aaPredicted RBP14.92□□□□□ -0.02
DDX56-209ENST00000473924 CDK5RAP2Q96SN8 1893 aa14.92□□□□□ -0.02
DDX56-209ENST00000473924 M0R2C6 588 aa14.91□□□□□ -0.02
DDX56-209ENST00000473924 GPAA1O43292 621 aa14.91□□□□□ -0.02
DDX56-209ENST00000473924 PRKAB2O43741 272 aa14.91□□□□□ -0.02
DDX56-209ENST00000473924 SLC4A8Q2Y0W8 1093 aa14.91□□□□□ -0.02
DDX56-209ENST00000473924 ZMYM1Q5SVZ6 1142 aa14.91□□□□□ -0.02
DDX56-209ENST00000473924 CRACR2BQ8N4Y2 399 aaPredicted RBP14.91□□□□□ -0.02
DDX56-209ENST00000473924 KLRG1Q96E93 195 aa14.91□□□□□ -0.02
DDX56-209ENST00000473924 SLC10A4Q96EP9 437 aa14.91□□□□□ -0.02
DDX56-209ENST00000473924 CAPNS2Q96L46 248 aa14.91□□□□□ -0.02
DDX56-209ENST00000473924 WRNIP1Q96S55 665 aa14.91□□□□□ -0.02
DDX56-209ENST00000473924 SEC62Q99442 399 aaKnown RBP14.91□□□□□ -0.02
DDX56-209ENST00000473924 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.91□□□□□ -0.02
DDX56-209ENST00000473924 ATP8A2Q9NTI2 1148 aa14.91□□□□□ -0.02
DDX56-209ENST00000473924 MCM9Q9NXL9 1143 aa14.91□□□□□ -0.02
DDX56-209ENST00000473924 PI4KBQ9UBF8 816 aa14.91□□□□□ -0.02
DDX56-209ENST00000473924 UNCXA6NJT0 531 aa14.9□□□□□ -0.02
DDX56-209ENST00000473924 HIP1O00291 1037 aa14.9□□□□□ -0.02
DDX56-209ENST00000473924 POLR3DP05423 398 aaPredicted RBP14.9□□□□□ -0.02
DDX56-209ENST00000473924 GSPT1P15170 499 aaKnown RBP14.9□□□□□ -0.02
DDX56-209ENST00000473924 GNAT2P19087 354 aa14.9□□□□□ -0.02
DDX56-209ENST00000473924 SDSP20132 328 aa14.9□□□□□ -0.02
DDX56-209ENST00000473924 VEGFBP49765 207 aa14.9□□□□□ -0.02
DDX56-209ENST00000473924 MAP3K9P80192 1104 aa14.9□□□□□ -0.02
DDX56-209ENST00000473924 LDLRAD1Q5T700 205 aa14.9□□□□□ -0.02
DDX56-209ENST00000473924 TTC6Q86TZ1 520 aa14.9□□□□□ -0.02
DDX56-209ENST00000473924 AMOTL1Q8IY63 956 aa14.9□□□□□ -0.02
DDX56-209ENST00000473924 DNAJC5GQ8N7S2 189 aa14.9□□□□□ -0.02
DDX56-209ENST00000473924 CCDC102AQ96A19 550 aa14.9□□□□□ -0.02
DDX56-209ENST00000473924 STRBPQ96SI9 672 aaKnown RBP14.9□□□□□ -0.02
DDX56-209ENST00000473924 DCP1AQ9NPI6 582 aaPredicted RBP14.9□□□□□ -0.02
DDX56-209ENST00000473924 DIAPH3Q9NSV4 1193 aa14.9□□□□□ -0.02
DDX56-209ENST00000473924 CSADQ9Y600 493 aa14.9□□□□□ -0.02
DDX56-209ENST00000473924 WDR33Q9C0J8 1336 aaKnown RBP14.9□□□□□ -0.02
DDX56-209ENST00000473924 APPP05067 770 aa14.89□□□□□ -0.03
DDX56-209ENST00000473924 NMIQ13287 307 aaPredicted RBP14.89□□□□□ -0.03
DDX56-209ENST00000473924 SKAP1Q86WV1 359 aa14.89□□□□□ -0.03
DDX56-209ENST00000473924 FOXP4Q8IVH2 680 aaPredicted RBP14.89□□□□□ -0.03
DDX56-209ENST00000473924 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.89□□□□□ -0.03
DDX56-209ENST00000473924 CLMNQ96JQ2 1002 aa14.89□□□□□ -0.03
DDX56-209ENST00000473924 HELLSQ9NRZ9 838 aa14.89□□□□□ -0.03
DDX56-209ENST00000473924 HERC5Q9UII4 1024 aaKnown RBP14.89□□□□□ -0.03
DDX56-209ENST00000473924 MYH1P12882 1939 aa14.89□□□□□ -0.03
DDX56-209ENST00000473924 NAV1Q8NEY1 1877 aa14.89□□□□□ -0.03
DDX56-209ENST00000473924 FAM196BA6NMK8 535 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms