RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 ALDH1B1P30837 517 aa21.15■□□□□ 0.98
VARS2-206ENST00000473916 CCDC144CPQ8IYA2 1237 aa21.15■□□□□ 0.98
VARS2-206ENST00000473916 FAM184AQ8NB25 1140 aa21.15■□□□□ 0.98
VARS2-206ENST00000473916 CRNKL1Q9BZJ0 848 aaKnown RBP21.15■□□□□ 0.98
VARS2-206ENST00000473916 ZNF219Q9P2Y4 722 aaPredicted RBP21.15■□□□□ 0.98
VARS2-206ENST00000473916 ANAPC4Q9UJX5 808 aa21.15■□□□□ 0.98
VARS2-206ENST00000473916 IFIT3O14879 490 aaKnown RBP21.14■□□□□ 0.98
VARS2-206ENST00000473916 MFSD14BQ5SR56 506 aa21.14■□□□□ 0.98
VARS2-206ENST00000473916 APOA5Q6Q788 366 aa21.14■□□□□ 0.98
VARS2-206ENST00000473916 DPP8Q6V1X1 898 aaPredicted RBP21.14■□□□□ 0.98
VARS2-206ENST00000473916 TMEM87BQ96K49 555 aa21.14■□□□□ 0.98
VARS2-206ENST00000473916 RBM27Q9P2N5 1060 aaKnown RBP21.14■□□□□ 0.98
VARS2-206ENST00000473916 FIBPO43427 364 aa21.14■□□□□ 0.97
VARS2-206ENST00000473916 DOK7Q18PE1 504 aa21.14■□□□□ 0.97
VARS2-206ENST00000473916 MICU3Q86XE3 530 aa21.14■□□□□ 0.97
VARS2-206ENST00000473916 NAV1Q8NEY1 1877 aa21.13■□□□□ 0.97
VARS2-206ENST00000473916 MYH15Q9Y2K3 1946 aa21.13■□□□□ 0.97
VARS2-206ENST00000473916 TPRNQ4KMQ1 711 aa21.13■□□□□ 0.97
VARS2-206ENST00000473916 CAVIN1Q6NZI2 390 aaKnown RBP21.13■□□□□ 0.97
VARS2-206ENST00000473916 GTF2IP78347 998 aa21.12■□□□□ 0.97
VARS2-206ENST00000473916 NFXL1Q6ZNB6 911 aa21.12■□□□□ 0.97
VARS2-206ENST00000473916 RTFDC1Q9BY42 306 aaPredicted RBP21.12■□□□□ 0.97
VARS2-206ENST00000473916 ADAMTSL1Q8N6G6 1762 aa21.12■□□□□ 0.97
VARS2-206ENST00000473916 MROH7-TTC4A0A0A0MT08 1334 aa21.12■□□□□ 0.97
VARS2-206ENST00000473916 USP17L8P0C7I0 530 aa21.12■□□□□ 0.97
VARS2-206ENST00000473916 CDC27P30260 824 aa21.12■□□□□ 0.97
VARS2-206ENST00000473916 ADD1P35611 737 aaKnown RBP21.12■□□□□ 0.97
VARS2-206ENST00000473916 BAG6P46379 1132 aa21.12■□□□□ 0.97
VARS2-206ENST00000473916 GUCY1B3Q02153 619 aa21.12■□□□□ 0.97
VARS2-206ENST00000473916 GIMAP6Q6P9H5 292 aa21.12■□□□□ 0.97
VARS2-206ENST00000473916 MXD3Q9BW11 206 aa21.12■□□□□ 0.97
VARS2-206ENST00000473916 RNF41Q9H4P4 317 aaPredicted RBP21.12■□□□□ 0.97
VARS2-206ENST00000473916 H0YIN7 160 aa21.11■□□□□ 0.97
VARS2-206ENST00000473916 METAP2P50579 478 aaKnown RBP eCLIP21.11■□□□□ 0.97
VARS2-206ENST00000473916 HMGN5P82970 282 aaKnown RBP21.11■□□□□ 0.97
VARS2-206ENST00000473916 SF3B2Q13435 895 aaKnown RBP21.11■□□□□ 0.97
VARS2-206ENST00000473916 FBXW7Q969H0 707 aa21.11■□□□□ 0.97
VARS2-206ENST00000473916 H3BQV1 296 aa21.11■□□□□ 0.97
VARS2-206ENST00000473916 IFFO2Q5TF58 517 aa21.11■□□□□ 0.97
VARS2-206ENST00000473916 SGMS1Q86VZ5 419 aa21.11■□□□□ 0.97
VARS2-206ENST00000473916 ATP8A2Q9NTI2 1148 aa21.11■□□□□ 0.97
VARS2-206ENST00000473916 ATP6V1DQ9Y5K8 247 aa21.11■□□□□ 0.97
VARS2-206ENST00000473916 LIFRP42702 1097 aa21.1■□□□□ 0.97
VARS2-206ENST00000473916 RESTQ13127 1097 aa21.1■□□□□ 0.97
VARS2-206ENST00000473916 OTUD7BQ6GQQ9 843 aa21.1■□□□□ 0.97
VARS2-206ENST00000473916 ZC3H12CQ9C0D7 883 aaKnown RBP21.1■□□□□ 0.97
VARS2-206ENST00000473916 GJB4Q9NTQ9 266 aa21.1■□□□□ 0.97
VARS2-206ENST00000473916 FAM217BQ9NTX9 383 aaPredicted RBP21.1■□□□□ 0.97
VARS2-206ENST00000473916 MCM9Q9NXL9 1143 aa21.1■□□□□ 0.97
VARS2-206ENST00000473916 MKRN1Q9UHC7 482 aaKnown RBP21.1■□□□□ 0.97
VARS2-206ENST00000473916 ZBTB43O43298 467 aa21.09■□□□□ 0.97
VARS2-206ENST00000473916 BTDP43251 543 aa21.09■□□□□ 0.97
VARS2-206ENST00000473916 GSTO1P78417 241 aa21.09■□□□□ 0.97
VARS2-206ENST00000473916 CERS5Q8N5B7 392 aa21.09■□□□□ 0.97
VARS2-206ENST00000473916 TMEM87AQ8NBN3 555 aa21.09■□□□□ 0.97
VARS2-206ENST00000473916 COA1Q9GZY4 146 aa21.09■□□□□ 0.97
VARS2-206ENST00000473916 SCN9AQ15858 1988 aa21.09■□□□□ 0.97
VARS2-206ENST00000473916 FAM205AQ6ZU69 1335 aa21.09■□□□□ 0.97
VARS2-206ENST00000473916 CPLX1O14810 134 aa21.09■□□□□ 0.97
VARS2-206ENST00000473916 RANBP6O60518 1105 aaKnown RBP21.09■□□□□ 0.97
VARS2-206ENST00000473916 WTAPQ15007 396 aa21.09■□□□□ 0.97
VARS2-206ENST00000473916 STYK1Q6J9G0 422 aa21.09■□□□□ 0.97
VARS2-206ENST00000473916 TGFBRAP1Q8WUH2 860 aa21.09■□□□□ 0.97
VARS2-206ENST00000473916 TMEM63CQ9P1W3 806 aa21.09■□□□□ 0.97
VARS2-206ENST00000473916 DLEC1Q9Y238 1755 aa21.08■□□□□ 0.97
VARS2-206ENST00000473916 F8W031 263 aaPredicted RBP21.08■□□□□ 0.97
VARS2-206ENST00000473916 USP5P45974 858 aa21.08■□□□□ 0.97
VARS2-206ENST00000473916 TMED8Q6PL24 325 aaPredicted RBP21.08■□□□□ 0.97
VARS2-206ENST00000473916 GAS2L3Q86XJ1 694 aa21.08■□□□□ 0.97
VARS2-206ENST00000473916 ESR2Q92731 530 aa21.08■□□□□ 0.97
VARS2-206ENST00000473916 KCNQ5Q9NR82 932 aa21.08■□□□□ 0.97
VARS2-206ENST00000473916 ORC3Q9UBD5 711 aaPredicted RBP21.08■□□□□ 0.97
VARS2-206ENST00000473916 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.08■□□□□ 0.97
VARS2-206ENST00000473916 TNKSO95271 1327 aa21.08■□□□□ 0.96
VARS2-206ENST00000473916 CCDC69A6NI79 296 aa21.07■□□□□ 0.96
VARS2-206ENST00000473916 GOLGA8AA7E2F4 631 aa21.07■□□□□ 0.96
VARS2-206ENST00000473916 UBE2Q2LH0YL09 131 aa21.07■□□□□ 0.96
VARS2-206ENST00000473916 SEC23AQ15436 765 aa21.07■□□□□ 0.96
VARS2-206ENST00000473916 PHKBQ93100 1093 aa21.07■□□□□ 0.96
VARS2-206ENST00000473916 AIFM3Q96NN9 605 aa21.07■□□□□ 0.96
VARS2-206ENST00000473916 DBNDD1Q9H9R9 158 aa21.07■□□□□ 0.96
VARS2-206ENST00000473916 TFIP11Q9UBB9 837 aaKnown RBP21.07■□□□□ 0.96
VARS2-206ENST00000473916 SLC12A7Q9Y666 1083 aa21.07■□□□□ 0.96
VARS2-206ENST00000473916 DDX60LQ5H9U9 1706 aaKnown RBP21.07■□□□□ 0.96
VARS2-206ENST00000473916 FGRP09769 529 aa21.07■□□□□ 0.96
VARS2-206ENST00000473916 PPP4CP60510 307 aa21.07■□□□□ 0.96
VARS2-206ENST00000473916 MAPKAPK5Q8IW41 473 aa21.07■□□□□ 0.96
VARS2-206ENST00000473916 UBAC1Q9BSL1 405 aa21.07■□□□□ 0.96
VARS2-206ENST00000473916 ARPP21Q9UBL0 812 aaPredicted RBP21.07■□□□□ 0.96
VARS2-206ENST00000473916 DHX16O60231 1041 aaKnown RBP21.06■□□□□ 0.96
VARS2-206ENST00000473916 NMT2O60551 498 aa21.06■□□□□ 0.96
VARS2-206ENST00000473916 BAG3O95817 575 aa21.06■□□□□ 0.96
VARS2-206ENST00000473916 PDIA4P13667 645 aaKnown RBP21.06■□□□□ 0.96
VARS2-206ENST00000473916 SBK1Q52WX2 424 aa21.06■□□□□ 0.96
VARS2-206ENST00000473916 FAM47AQ5JRC9 791 aa21.06■□□□□ 0.96
VARS2-206ENST00000473916 ENAHQ8N8S7 591 aaPredicted RBP21.06■□□□□ 0.96
VARS2-206ENST00000473916 TBC1D22AQ8WUA7 517 aa21.06■□□□□ 0.96
VARS2-206ENST00000473916 DYNLL2Q96FJ2 89 aa21.06■□□□□ 0.96
VARS2-206ENST00000473916 SAP30BPQ9UHR5 308 aaKnown RBP21.06■□□□□ 0.96
VARS2-206ENST00000473916 TAOK2Q9UL54 1235 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms