RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 DNAH12Q6ZR08 3092 aa13.41□□□□□ -0.26
SSBP1-209ENST00000473783 DOCK1Q14185 1865 aa13.4□□□□□ -0.26
SSBP1-209ENST00000473783 PLIN1O60240 522 aa13.4□□□□□ -0.26
SSBP1-209ENST00000473783 SMAD3P84022 425 aaKnown RBP13.4□□□□□ -0.26
SSBP1-209ENST00000473783 MAP3K12Q12852 859 aa13.4□□□□□ -0.26
SSBP1-209ENST00000473783 TRIM32Q13049 653 aa13.4□□□□□ -0.26
SSBP1-209ENST00000473783 MAP3K21Q5TCX8 1036 aa13.4□□□□□ -0.26
SSBP1-209ENST00000473783 LDHAL6AQ6ZMR3 332 aa13.4□□□□□ -0.26
SSBP1-209ENST00000473783 CCDC146Q8IYE0 955 aa13.4□□□□□ -0.26
SSBP1-209ENST00000473783 RUNDC1Q96C34 613 aa13.4□□□□□ -0.26
SSBP1-209ENST00000473783 TTYH1Q9H313 450 aaPredicted RBP13.4□□□□□ -0.26
SSBP1-209ENST00000473783 IFT57Q9NWB7 429 aa13.4□□□□□ -0.26
SSBP1-209ENST00000473783 PNMA3Q9UL41 463 aa13.4□□□□□ -0.26
SSBP1-209ENST00000473783 ZHX2Q9Y6X8 837 aa13.4□□□□□ -0.26
SSBP1-209ENST00000473783 MYO9BQ13459 2157 aa13.39□□□□□ -0.27
SSBP1-209ENST00000473783 GNAI1P63096 354 aa13.39□□□□□ -0.27
SSBP1-209ENST00000473783 HHIPL2Q6UWX4 724 aa13.39□□□□□ -0.27
SSBP1-209ENST00000473783 TRIB2Q92519 343 aa13.39□□□□□ -0.27
SSBP1-209ENST00000473783 PICK1Q9NRD5 415 aa13.39□□□□□ -0.27
SSBP1-209ENST00000473783 CNNM1Q9NRU3 951 aa13.39□□□□□ -0.27
SSBP1-209ENST00000473783 GJD2Q9UKL4 321 aa13.39□□□□□ -0.27
SSBP1-209ENST00000473783 AGTPBP1Q9UPW5 1226 aa13.39□□□□□ -0.27
SSBP1-209ENST00000473783 SUGT1Q9Y2Z0 365 aa13.39□□□□□ -0.27
SSBP1-209ENST00000473783 AFG3L2Q9Y4W6 797 aa13.39□□□□□ -0.27
SSBP1-209ENST00000473783 MYH13Q9UKX3 1938 aa13.39□□□□□ -0.27
SSBP1-209ENST00000473783 SYNGAP1Q96PV0 1343 aa13.39□□□□□ -0.27
SSBP1-209ENST00000473783 CACNA1FO60840 1977 aa13.38□□□□□ -0.27
SSBP1-209ENST00000473783 PRKAR2AP13861 404 aaKnown RBP13.38□□□□□ -0.27
SSBP1-209ENST00000473783 PTPRAP18433 802 aa13.38□□□□□ -0.27
SSBP1-209ENST00000473783 SCYL3Q8IZE3 742 aa13.38□□□□□ -0.27
SSBP1-209ENST00000473783 C8orf58Q8NAV2 365 aa13.38□□□□□ -0.27
SSBP1-209ENST00000473783 PRKAG2Q9UGJ0 569 aa13.38□□□□□ -0.27
SSBP1-209ENST00000473783 CHMP3Q9Y3E7 222 aa13.38□□□□□ -0.27
SSBP1-209ENST00000473783 ARIH1Q9Y4X5 557 aaPredicted RBP13.38□□□□□ -0.27
SSBP1-209ENST00000473783 LOC285556D6RIA3 1793 aa13.37□□□□□ -0.27
SSBP1-209ENST00000473783 GCLCP48506 637 aaPredicted RBP13.37□□□□□ -0.27
SSBP1-209ENST00000473783 FOXO4P98177 505 aa13.37□□□□□ -0.27
SSBP1-209ENST00000473783 CHAF1AQ13111 956 aaPredicted RBP13.37□□□□□ -0.27
SSBP1-209ENST00000473783 CCDC57Q2TAC2 916 aa13.37□□□□□ -0.27
SSBP1-209ENST00000473783 TAF7LQ5H9L4 462 aa13.37□□□□□ -0.27
SSBP1-209ENST00000473783 VPS37DQ86XT2 251 aa13.37□□□□□ -0.27
SSBP1-209ENST00000473783 LINS1Q8NG48 757 aa13.37□□□□□ -0.27
SSBP1-209ENST00000473783 STK31Q9BXU1 1019 aa13.37□□□□□ -0.27
SSBP1-209ENST00000473783 CALD1Q05682 793 aaKnown RBP13.36□□□□□ -0.27
SSBP1-209ENST00000473783 SHHQ15465 462 aa13.36□□□□□ -0.27
SSBP1-209ENST00000473783 FBXO33Q7Z6M2 555 aa13.36□□□□□ -0.27
SSBP1-209ENST00000473783 IQSEC3Q9UPP2 1182 aaPredicted RBP13.36□□□□□ -0.27
SSBP1-209ENST00000473783 ATRNL1Q5VV63 1379 aa13.35□□□□□ -0.27
SSBP1-209ENST00000473783 PHF20L1A8MW92 1017 aa13.35□□□□□ -0.27
SSBP1-209ENST00000473783 FRAT2O75474 233 aaPredicted RBP13.35□□□□□ -0.27
SSBP1-209ENST00000473783 XRCC5P13010 732 aaKnown RBP13.35□□□□□ -0.27
SSBP1-209ENST00000473783 TCP10Q12799 353 aa13.35□□□□□ -0.27
SSBP1-209ENST00000473783 LHX8Q68G74 356 aa13.35□□□□□ -0.27
SSBP1-209ENST00000473783 TRMT44Q8IYL2 757 aaKnown RBP13.35□□□□□ -0.27
SSBP1-209ENST00000473783 USP38Q8NB14 1042 aa13.35□□□□□ -0.27
SSBP1-209ENST00000473783 ATXN2LQ8WWM7 1075 aaKnown RBP13.35□□□□□ -0.27
SSBP1-209ENST00000473783 ZNF594Q96JF6 807 aaPredicted RBP13.35□□□□□ -0.27
SSBP1-209ENST00000473783 MUC6Q6W4X9 2439 aa13.34□□□□□ -0.27
SSBP1-209ENST00000473783 TRIM75PA6NK02 468 aa13.34□□□□□ -0.27
SSBP1-209ENST00000473783 C9orf50Q5SZB4 431 aa13.34□□□□□ -0.27
SSBP1-209ENST00000473783 LMBR1LQ6UX01 489 aa13.34□□□□□ -0.27
SSBP1-209ENST00000473783 PROCA1Q8NCQ7 364 aaPredicted RBP13.34□□□□□ -0.27
SSBP1-209ENST00000473783 CCER1Q8TC90 406 aaPredicted RBP13.34□□□□□ -0.27
SSBP1-209ENST00000473783 SOCS4Q8WXH5 440 aa13.34□□□□□ -0.27
SSBP1-209ENST00000473783 C1QTNF1Q9BXJ1 281 aa13.34□□□□□ -0.27
SSBP1-209ENST00000473783 SPINK5Q9NQ38 1064 aaPredicted RBP13.34□□□□□ -0.27
SSBP1-209ENST00000473783 RNF216Q9NWF9 866 aaPredicted RBP13.34□□□□□ -0.27
SSBP1-209ENST00000473783 RLFQ13129 1914 aa13.33□□□□□ -0.28
SSBP1-209ENST00000473783 CYP2B6P20813 491 aa13.33□□□□□ -0.28
SSBP1-209ENST00000473783 NFIAQ12857 509 aa13.33□□□□□ -0.28
SSBP1-209ENST00000473783 CAVIN4Q5BKX8 364 aa13.33□□□□□ -0.28
SSBP1-209ENST00000473783 TREML2Q5T2D2 321 aa13.33□□□□□ -0.28
SSBP1-209ENST00000473783 ADAMTS19Q8TE59 1207 aa13.33□□□□□ -0.28
SSBP1-209ENST00000473783 DNAAF4Q8WXU2 420 aa13.33□□□□□ -0.28
SSBP1-209ENST00000473783 CTNND1O60716 968 aaKnown RBP13.32□□□□□ -0.28
SSBP1-209ENST00000473783 ZKSCAN1P17029 563 aaPredicted RBP13.32□□□□□ -0.28
SSBP1-209ENST00000473783 CACNB2Q08289 660 aaPredicted RBP13.32□□□□□ -0.28
SSBP1-209ENST00000473783 PABPC4Q13310 644 aaKnown RBP eCLIP13.32□□□□□ -0.28
SSBP1-209ENST00000473783 CDC42EP5Q6NZY7 148 aa13.32□□□□□ -0.28
SSBP1-209ENST00000473783 G2E3Q7L622 706 aa13.32□□□□□ -0.28
SSBP1-209ENST00000473783 TSPYL6Q8N831 410 aa13.32□□□□□ -0.28
SSBP1-209ENST00000473783 ASB2Q96Q27 587 aa13.32□□□□□ -0.28
SSBP1-209ENST00000473783 NUDT12Q9BQG2 462 aa13.32□□□□□ -0.28
SSBP1-209ENST00000473783 SENP6Q9GZR1 1112 aaPredicted RBP13.32□□□□□ -0.28
SSBP1-209ENST00000473783 MORF4L1Q9UBU8 362 aa13.32□□□□□ -0.28
SSBP1-209ENST00000473783 FAM198AQ9UFP1 575 aa13.32□□□□□ -0.28
SSBP1-209ENST00000473783 DAGLAQ9Y4D2 1042 aa13.32□□□□□ -0.28
SSBP1-209ENST00000473783 LRRFIP2Q9Y608 721 aaKnown RBP13.32□□□□□ -0.28
SSBP1-209ENST00000473783 UHRF1Q96T88 793 aaPredicted RBP13.31□□□□□ -0.28
SSBP1-209ENST00000473783 THEGQ9P2T0 379 aa13.31□□□□□ -0.28
SSBP1-209ENST00000473783 MROH5Q6ZUA9 1318 aa13.31□□□□□ -0.28
SSBP1-209ENST00000473783 ATAD5Q96QE3 1844 aa13.3□□□□□ -0.28
SSBP1-209ENST00000473783 SLC4A2P04920 1241 aa13.3□□□□□ -0.28
SSBP1-209ENST00000473783 CCND3P30281 292 aaPredicted RBP13.3□□□□□ -0.28
SSBP1-209ENST00000473783 RTP1P59025 263 aa13.3□□□□□ -0.28
SSBP1-209ENST00000473783 MAP3K10Q02779 954 aa13.3□□□□□ -0.28
SSBP1-209ENST00000473783 FLIIQ13045 1269 aa13.3□□□□□ -0.28
SSBP1-209ENST00000473783 WDR43Q15061 677 aaKnown RBP eCLIP13.3□□□□□ -0.28
SSBP1-209ENST00000473783 HCN4Q9Y3Q4 1203 aa13.3□□□□□ -0.28
SSBP1-209ENST00000473783 ATN1P54259 1190 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms