RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	ASIC4	Q96FT7	647 aa		7.55	□□□□□ -1.2
BBX-223	ENST00000473542	FAM105A	Q9NUU6	356 aa		7.55	□□□□□ -1.2
BBX-223	ENST00000473542	PPP4R2	Q9NY27	417 aa		7.55	□□□□□ -1.2
BBX-223	ENST00000473542	GADD45B	O75293	160 aa	Predicted RBP	7.54	□□□□□ -1.2
BBX-223	ENST00000473542	PAPLN	O95428	1278 aa		7.54	□□□□□ -1.2
BBX-223	ENST00000473542	GRIA4	P48058	902 aa		7.54	□□□□□ -1.2
BBX-223	ENST00000473542	FANCC	Q00597	558 aa		7.54	□□□□□ -1.2
BBX-223	ENST00000473542	PCDH1	Q08174	1060 aa		7.54	□□□□□ -1.2
BBX-223	ENST00000473542	AKAP4	Q5JQC9	854 aa		7.54	□□□□□ -1.2
BBX-223	ENST00000473542	PI16	Q6UXB8	463 aa		7.54	□□□□□ -1.2
BBX-223	ENST00000473542	DYM	Q7RTS9	669 aa		7.54	□□□□□ -1.2
BBX-223	ENST00000473542	BCO2	Q9BYV7	579 aa		7.54	□□□□□ -1.2
BBX-223	ENST00000473542	USP31	Q70CQ4	1352 aa		7.54	□□□□□ -1.2
BBX-223	ENST00000473542		A0A096LPE4	126 aa		7.53	□□□□□ -1.2
BBX-223	ENST00000473542		A0A1W2PP55	124 aa		7.53	□□□□□ -1.2
BBX-223	ENST00000473542		A0A1W2PPZ6	126 aa		7.53	□□□□□ -1.2
BBX-223	ENST00000473542	XRCC5	P13010	732 aa	Known RBP	7.53	□□□□□ -1.2
BBX-223	ENST00000473542	GSTT1	P30711	240 aa		7.53	□□□□□ -1.2
BBX-223	ENST00000473542	ZNF76	P36508	570 aa		7.53	□□□□□ -1.2
BBX-223	ENST00000473542	HDLBP	Q00341	1268 aa	Known RBP	7.53	□□□□□ -1.2
BBX-223	ENST00000473542	GRM2	Q14416	872 aa		7.53	□□□□□ -1.2
BBX-223	ENST00000473542	METTL16	Q86W50	562 aa	Known RBP	7.53	□□□□□ -1.2
BBX-223	ENST00000473542	RNF34	Q969K3	372 aa		7.53	□□□□□ -1.2
BBX-223	ENST00000473542	YIPF2	Q9BWQ6	316 aa		7.53	□□□□□ -1.2
BBX-223	ENST00000473542	ACSS3	Q9H6R3	686 aa		7.53	□□□□□ -1.2
BBX-223	ENST00000473542	LGR6	Q9HBX8	967 aa		7.53	□□□□□ -1.2
BBX-223	ENST00000473542	ZC3H6	P61129	1189 aa	Known RBP	7.52	□□□□□ -1.21
BBX-223	ENST00000473542	NXPE4	Q6UWF7	544 aa		7.52	□□□□□ -1.21
BBX-223	ENST00000473542	SEZ6L2	Q6UXD5	910 aa		7.52	□□□□□ -1.21
BBX-223	ENST00000473542	TCF12	Q99081	682 aa		7.52	□□□□□ -1.21
BBX-223	ENST00000473542	TRIM56	Q9BRZ2	755 aa	Known RBP	7.52	□□□□□ -1.21
BBX-223	ENST00000473542	ZFYVE1	Q9HBF4	777 aa		7.52	□□□□□ -1.21
BBX-223	ENST00000473542	C1GALT1	Q9NS00	363 aa		7.52	□□□□□ -1.21
BBX-223	ENST00000473542	USP17L7	P0C7H9	530 aa		7.51	□□□□□ -1.21
BBX-223	ENST00000473542	JUNB	P17275	347 aa	Predicted RBP	7.51	□□□□□ -1.21
BBX-223	ENST00000473542	PTPN12	Q05209	780 aa	Known RBP	7.51	□□□□□ -1.21
BBX-223	ENST00000473542	MAP7	Q14244	749 aa		7.51	□□□□□ -1.21
BBX-223	ENST00000473542	POU4F3	Q15319	338 aa		7.51	□□□□□ -1.21
BBX-223	ENST00000473542	TAF1C	Q15572	869 aa	Predicted RBP	7.51	□□□□□ -1.21
BBX-223	ENST00000473542	DUSP27	Q5VZP5	1158 aa		7.51	□□□□□ -1.21
BBX-223	ENST00000473542	SPRED2	Q7Z698	418 aa		7.51	□□□□□ -1.21
BBX-223	ENST00000473542	CCNJL	Q8IV13	435 aa		7.51	□□□□□ -1.21
BBX-223	ENST00000473542	AGBL5	Q8NDL9	886 aa		7.51	□□□□□ -1.21
BBX-223	ENST00000473542	GLIS3	Q8NEA6	775 aa		7.51	□□□□□ -1.21
BBX-223	ENST00000473542	BCL7C	Q8WUZ0	217 aa	Predicted RBP	7.51	□□□□□ -1.21
BBX-223	ENST00000473542	EHD4	Q9H223	541 aa		7.51	□□□□□ -1.21
BBX-223	ENST00000473542	CLEC4M	Q9H2X3	399 aa	Predicted RBP	7.51	□□□□□ -1.21
BBX-223	ENST00000473542	PPM1H	Q9ULR3	514 aa		7.51	□□□□□ -1.21
BBX-223	ENST00000473542	AP4E1	Q9UPM8	1137 aa		7.51	□□□□□ -1.21
BBX-223	ENST00000473542	ERCC5	P28715	1186 aa	Predicted RBP	7.5	□□□□□ -1.21
BBX-223	ENST00000473542	ZNF648	Q5T619	568 aa	Predicted RBP	7.5	□□□□□ -1.21
BBX-223	ENST00000473542	LCE4A	Q5TA78	99 aa		7.5	□□□□□ -1.21
BBX-223	ENST00000473542	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	7.5	□□□□□ -1.21
BBX-223	ENST00000473542	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	7.49	□□□□□ -1.21
BBX-223	ENST00000473542	ASPA	P45381	313 aa		7.49	□□□□□ -1.21
BBX-223	ENST00000473542	BNIP3	Q12983	259 aa		7.49	□□□□□ -1.21
BBX-223	ENST00000473542	NT5DC4	Q86YG4	428 aa		7.49	□□□□□ -1.21
BBX-223	ENST00000473542	C3orf58	Q8NDZ4	430 aa		7.49	□□□□□ -1.21
BBX-223	ENST00000473542	KRTAP4-9	Q9BYQ8	210 aa		7.49	□□□□□ -1.21
BBX-223	ENST00000473542	TGIF2	Q9GZN2	237 aa		7.49	□□□□□ -1.21
BBX-223	ENST00000473542	GSX1	Q9H4S2	264 aa	Predicted RBP	7.49	□□□□□ -1.21
BBX-223	ENST00000473542	LIN7B	Q9HAP6	207 aa		7.49	□□□□□ -1.21
BBX-223	ENST00000473542	DAGLA	Q9Y4D2	1042 aa		7.49	□□□□□ -1.21
BBX-223	ENST00000473542	CARMIL2	Q6F5E8	1435 aa		7.49	□□□□□ -1.21
BBX-223	ENST00000473542	TMEM238L	A0A1B0GVL6	79 aa		7.48	□□□□□ -1.21
BBX-223	ENST00000473542	CYP11A1	P05108	521 aa		7.48	□□□□□ -1.21
BBX-223	ENST00000473542	RAD51AP2	Q09MP3	1159 aa		7.48	□□□□□ -1.21
BBX-223	ENST00000473542	HS2ST1	Q7LGA3	356 aa		7.48	□□□□□ -1.21
BBX-223	ENST00000473542	NOC4L	Q9BVI4	516 aa	Known RBP	7.48	□□□□□ -1.21
BBX-223	ENST00000473542	ABCB6	Q9NP58	842 aa		7.48	□□□□□ -1.21
BBX-223	ENST00000473542	RAD18	Q9NS91	495 aa		7.48	□□□□□ -1.21
BBX-223	ENST00000473542		U3KQE9	123 aa		7.48	□□□□□ -1.21
BBX-223	ENST00000473542	ITPKA	P23677	461 aa		7.47	□□□□□ -1.21
BBX-223	ENST00000473542	CYP27A1	Q02318	531 aa		7.47	□□□□□ -1.21
BBX-223	ENST00000473542	PLCL1	Q15111	1095 aa		7.47	□□□□□ -1.21
BBX-223	ENST00000473542	ZNF124	Q15973	351 aa		7.47	□□□□□ -1.21
BBX-223	ENST00000473542	ZNF792	Q3KQV3	632 aa		7.47	□□□□□ -1.21
BBX-223	ENST00000473542	OGFOD3	Q6PK18	319 aa		7.47	□□□□□ -1.21
BBX-223	ENST00000473542	WDR18	Q9BV38	432 aa		7.47	□□□□□ -1.21
BBX-223	ENST00000473542	PPP1R9A	Q9ULJ8	1098 aa		7.47	□□□□□ -1.21
BBX-223	ENST00000473542	SLC5A6	Q9Y289	635 aa		7.47	□□□□□ -1.21
BBX-223	ENST00000473542	AOC2	O75106	756 aa		7.46	□□□□□ -1.22
BBX-223	ENST00000473542	B3GALT4	O96024	378 aa		7.45	□□□□□ -1.22
BBX-223	ENST00000473542	RLBP1	P12271	317 aa		7.45	□□□□□ -1.22
BBX-223	ENST00000473542	CD96	P40200	585 aa		7.45	□□□□□ -1.22
BBX-223	ENST00000473542	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	7.45	□□□□□ -1.22
BBX-223	ENST00000473542	MEI1	Q5TIA1	1274 aa		7.45	□□□□□ -1.22
BBX-223	ENST00000473542	ERMP1	Q7Z2K6	904 aa		7.45	□□□□□ -1.22
BBX-223	ENST00000473542	PLD6	Q8N2A8	252 aa	Known RBP	7.45	□□□□□ -1.22
BBX-223	ENST00000473542	FAM181A	Q8N9Y4	354 aa		7.45	□□□□□ -1.22
BBX-223	ENST00000473542	WDR89	Q96FK6	387 aa	Predicted RBP	7.45	□□□□□ -1.22
BBX-223	ENST00000473542	CORO1B	Q9BR76	489 aa		7.45	□□□□□ -1.22
BBX-223	ENST00000473542	ZNF576	Q9H609	170 aa		7.45	□□□□□ -1.22
BBX-223	ENST00000473542	FCGRT	P55899	365 aa		7.44	□□□□□ -1.22
BBX-223	ENST00000473542	CDK5R2	Q13319	367 aa		7.44	□□□□□ -1.22
BBX-223	ENST00000473542	DTHD1	Q6ZMT9	781 aa		7.44	□□□□□ -1.22
BBX-223	ENST00000473542	SLC43A3	Q8NBI5	491 aa		7.44	□□□□□ -1.22
BBX-223	ENST00000473542	DDX41	Q9UJV9	622 aa	Known RBP	7.44	□□□□□ -1.22
BBX-223	ENST00000473542	ADAMTS6	Q9UKP5	1117 aa		7.44	□□□□□ -1.22
BBX-223	ENST00000473542	LIG1	P18858	919 aa		7.43	□□□□□ -1.22

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