RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 UTRNP46939 3433 aa10.85□□□□□ -0.67
A1CF-209ENST00000473480 EIF1AYO14602 144 aaKnown RBP10.84□□□□□ -0.67
A1CF-209ENST00000473480 CDC25BP30305 580 aa10.84□□□□□ -0.67
A1CF-209ENST00000473480 USPL1Q5W0Q7 1092 aa10.84□□□□□ -0.67
A1CF-209ENST00000473480 BSNDQ8WZ55 320 aa10.84□□□□□ -0.67
A1CF-209ENST00000473480 MAST1Q9Y2H9 1570 aa10.84□□□□□ -0.67
A1CF-209ENST00000473480 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.84□□□□□ -0.67
A1CF-209ENST00000473480 H3BRJ5 948 aa10.83□□□□□ -0.68
A1CF-209ENST00000473480 FSCN2O14926 492 aa10.83□□□□□ -0.68
A1CF-209ENST00000473480 SOX13Q9UN79 622 aa10.83□□□□□ -0.68
A1CF-209ENST00000473480 CFAP65Q6ZU64 1925 aaKnown RBP10.82□□□□□ -0.68
A1CF-209ENST00000473480 NINLQ9Y2I6 1382 aa10.82□□□□□ -0.68
A1CF-209ENST00000473480 A0A1W2PP55 124 aa10.82□□□□□ -0.68
A1CF-209ENST00000473480 TXNRD3Q86VQ6 643 aa10.82□□□□□ -0.68
A1CF-209ENST00000473480 KLHL23Q8NBE8 558 aa10.82□□□□□ -0.68
A1CF-209ENST00000473480 ASAP3Q8TDY4 903 aa10.82□□□□□ -0.68
A1CF-209ENST00000473480 WNT8BQ93098 351 aa10.82□□□□□ -0.68
A1CF-209ENST00000473480 CSRNP1Q96S65 589 aa10.82□□□□□ -0.68
A1CF-209ENST00000473480 MRPL18Q9H0U6 180 aaKnown RBP10.82□□□□□ -0.68
A1CF-209ENST00000473480 CFDP1Q9UEE9 299 aaPredicted RBP10.82□□□□□ -0.68
A1CF-209ENST00000473480 GPATCH8Q9UKJ3 1502 aaKnown RBP10.82□□□□□ -0.68
A1CF-209ENST00000473480 ASXL1Q8IXJ9 1541 aa10.81□□□□□ -0.68
A1CF-209ENST00000473480 ZSCAN29Q8IWY8 852 aaPredicted RBP10.81□□□□□ -0.68
A1CF-209ENST00000473480 GALNT11Q8NCW6 608 aa10.81□□□□□ -0.68
A1CF-209ENST00000473480 SEC31BQ9NQW1 1179 aa10.81□□□□□ -0.68
A1CF-209ENST00000473480 PTCH1Q13635 1447 aa10.81□□□□□ -0.68
A1CF-209ENST00000473480 ARHGAP35Q9NRY4 1499 aa10.81□□□□□ -0.68
A1CF-209ENST00000473480 CD68P34810 354 aaPredicted RBP10.8□□□□□ -0.68
A1CF-209ENST00000473480 KIAA0319Q5VV43 1072 aa10.8□□□□□ -0.68
A1CF-209ENST00000473480 CCDC74AQ96AQ1 378 aa10.8□□□□□ -0.68
A1CF-209ENST00000473480 CARD10Q9BWT7 1032 aa10.8□□□□□ -0.68
A1CF-209ENST00000473480 LIN7BQ9HAP6 207 aa10.8□□□□□ -0.68
A1CF-209ENST00000473480 NPHS2Q9NP85 383 aa10.8□□□□□ -0.68
A1CF-209ENST00000473480 SPHKAPQ2M3C7 1700 aa10.8□□□□□ -0.68
A1CF-209ENST00000473480 CHD2O14647 1828 aaKnown RBP10.79□□□□□ -0.68
A1CF-209ENST00000473480 TREHO43280 583 aa10.79□□□□□ -0.68
A1CF-209ENST00000473480 PLCB3Q01970 1234 aa10.79□□□□□ -0.68
A1CF-209ENST00000473480 CCNJLQ8IV13 435 aa10.79□□□□□ -0.68
A1CF-209ENST00000473480 OSGEPQ9NPF4 335 aa10.79□□□□□ -0.68
A1CF-209ENST00000473480 ARL4DP49703 201 aa10.78□□□□□ -0.68
A1CF-209ENST00000473480 DSC3Q14574 896 aa10.78□□□□□ -0.68
A1CF-209ENST00000473480 VN1R5Q7Z5H4 357 aa10.78□□□□□ -0.68
A1CF-209ENST00000473480 TMEM130Q8N3G9 435 aa10.78□□□□□ -0.68
A1CF-209ENST00000473480 WFDC12Q8WWY7 111 aa10.78□□□□□ -0.68
A1CF-209ENST00000473480 BRWD3Q6RI45 1802 aa10.78□□□□□ -0.68
A1CF-209ENST00000473480 CAMSAP2Q08AD1 1489 aa10.78□□□□□ -0.68
A1CF-209ENST00000473480 RALGAPBQ86X10 1494 aa10.77□□□□□ -0.69
A1CF-209ENST00000473480 TM4SF5O14894 197 aa10.77□□□□□ -0.69
A1CF-209ENST00000473480 IKBKEQ14164 716 aa10.77□□□□□ -0.69
A1CF-209ENST00000473480 DOC2BQ14184 412 aa10.77□□□□□ -0.69
A1CF-209ENST00000473480 ASB16Q96NS5 453 aa10.77□□□□□ -0.69
A1CF-209ENST00000473480 TCF12Q99081 682 aa10.77□□□□□ -0.69
A1CF-209ENST00000473480 EHD4Q9H223 541 aa10.77□□□□□ -0.69
A1CF-209ENST00000473480 AKTIPQ9H8T0 292 aa10.77□□□□□ -0.69
A1CF-209ENST00000473480 SPON1Q9HCB6 807 aa10.77□□□□□ -0.69
A1CF-209ENST00000473480 CAMTA1Q9Y6Y1 1673 aa10.76□□□□□ -0.69
A1CF-209ENST00000473480 METTL12A8MUP2 240 aa10.76□□□□□ -0.69
A1CF-209ENST00000473480 NOS3P29474 1203 aa10.76□□□□□ -0.69
A1CF-209ENST00000473480 IREB2P48200 963 aaKnown RBP10.76□□□□□ -0.69
A1CF-209ENST00000473480 SUZ12Q15022 739 aaKnown RBP10.76□□□□□ -0.69
A1CF-209ENST00000473480 FOXD4L6Q3SYB3 417 aaPredicted RBP10.76□□□□□ -0.69
A1CF-209ENST00000473480 FOXD4L3Q6VB84 417 aaPredicted RBP10.76□□□□□ -0.69
A1CF-209ENST00000473480 KRT27Q7Z3Y8 459 aa10.76□□□□□ -0.69
A1CF-209ENST00000473480 SLC7A3Q8WY07 619 aa10.76□□□□□ -0.69
A1CF-209ENST00000473480 DDX17Q92841 729 aaKnown RBP10.76□□□□□ -0.69
A1CF-209ENST00000473480 KLHDC7BQ96G42 594 aa10.76□□□□□ -0.69
A1CF-209ENST00000473480 TPSG1Q9NRR2 321 aa10.76□□□□□ -0.69
A1CF-209ENST00000473480 LRRIQ1Q96JM4 1722 aa10.75□□□□□ -0.69
A1CF-209ENST00000473480 A0A096LPE4 126 aa10.75□□□□□ -0.69
A1CF-209ENST00000473480 A0A1W2PPZ6 126 aa10.75□□□□□ -0.69
A1CF-209ENST00000473480 F8W735 103 aaPredicted RBP10.75□□□□□ -0.69
A1CF-209ENST00000473480 C19orf57Q0VDD7 668 aa10.75□□□□□ -0.69
A1CF-209ENST00000473480 SND1Q7KZF4 910 aaKnown RBP eCLIP10.75□□□□□ -0.69
A1CF-209ENST00000473480 CHD4Q14839 1912 aa10.75□□□□□ -0.69
A1CF-209ENST00000473480 PIK3C2BO00750 1634 aa10.75□□□□□ -0.69
A1CF-209ENST00000473480 EFCAB6Q5THR3 1501 aa10.74□□□□□ -0.69
A1CF-209ENST00000473480 GADD45BO75293 160 aaPredicted RBP10.74□□□□□ -0.69
A1CF-209ENST00000473480 FURINP09958 794 aa10.74□□□□□ -0.69
A1CF-209ENST00000473480 GRIA4P48058 902 aa10.74□□□□□ -0.69
A1CF-209ENST00000473480 KCNK4Q9NYG8 393 aa10.74□□□□□ -0.69
A1CF-209ENST00000473480 PNMA6FA0A0J9YX94 578 aa10.73□□□□□ -0.69
A1CF-209ENST00000473480 SOX1O00570 391 aaPredicted RBP10.73□□□□□ -0.69
A1CF-209ENST00000473480 ENOX2Q16206 610 aaKnown RBP10.73□□□□□ -0.69
A1CF-209ENST00000473480 DUOXA2Q1HG44 320 aa10.73□□□□□ -0.69
A1CF-209ENST00000473480 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.73□□□□□ -0.69
A1CF-209ENST00000473480 EPS8L3Q8TE67 593 aaKnown RBP10.73□□□□□ -0.69
A1CF-209ENST00000473480 SOX17Q9H6I2 414 aaPredicted RBP10.73□□□□□ -0.69
A1CF-209ENST00000473480 NLRP2Q9NX02 1062 aa10.73□□□□□ -0.69
A1CF-209ENST00000473480 TRAK1Q9UPV9 953 aa10.73□□□□□ -0.69
A1CF-209ENST00000473480 DCCP43146 1447 aa10.73□□□□□ -0.69
A1CF-209ENST00000473480 KCNQ2O43526 872 aa10.72□□□□□ -0.69
A1CF-209ENST00000473480 EIF4EBP3O60516 100 aaPredicted RBP10.72□□□□□ -0.69
A1CF-209ENST00000473480 ESRRAP11474 423 aaPredicted RBP10.72□□□□□ -0.69
A1CF-209ENST00000473480 PRELPP51888 382 aa10.72□□□□□ -0.69
A1CF-209ENST00000473480 SPRED3Q2MJR0 410 aa10.72□□□□□ -0.69
A1CF-209ENST00000473480 ACAD11Q709F0 780 aa10.72□□□□□ -0.69
A1CF-209ENST00000473480 UNC5CLQ8IV45 518 aa10.72□□□□□ -0.69
A1CF-209ENST00000473480 FOXD4L4Q8WXT5 416 aaPredicted RBP10.72□□□□□ -0.69
A1CF-209ENST00000473480 SSBP4Q9BWG4 385 aaPredicted RBP10.72□□□□□ -0.69
A1CF-209ENST00000473480 CLEC4MQ9H2X3 399 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms