RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 SNAPC2Q13487 334 aa25.48■■□□□ 1.67
EPHB3-202ENST00000473079 SH3BP5LQ7L8J4 393 aa25.48■■□□□ 1.67
EPHB3-202ENST00000473079 DDX4Q9NQI0 724 aaKnown RBP25.48■■□□□ 1.67
EPHB3-202ENST00000473079 RAI14Q9P0K7 980 aa25.48■■□□□ 1.67
EPHB3-202ENST00000473079 LRP2BPQ9P2M1 347 aa25.48■■□□□ 1.67
EPHB3-202ENST00000473079 RCAN3Q9UKA8 241 aa25.48■■□□□ 1.67
EPHB3-202ENST00000473079 DDX19BQ9UMR2 479 aa25.48■■□□□ 1.67
EPHB3-202ENST00000473079 FBXO46Q6PJ61 603 aaPredicted RBP25.47■■□□□ 1.67
EPHB3-202ENST00000473079 ERC1Q8IUD2 1116 aa25.47■■□□□ 1.67
EPHB3-202ENST00000473079 EAF2Q96CJ1 260 aaPredicted RBP25.47■■□□□ 1.67
EPHB3-202ENST00000473079 DBNLQ9UJU6 430 aaKnown RBP25.47■■□□□ 1.67
EPHB3-202ENST00000473079 HPS5Q9UPZ3 1129 aa25.47■■□□□ 1.67
EPHB3-202ENST00000473079 PHF20L1A8MW92 1017 aa25.46■■□□□ 1.67
EPHB3-202ENST00000473079 RPAP2Q8IXW5 612 aaPredicted RBP25.46■■□□□ 1.67
EPHB3-202ENST00000473079 FAM43AQ8N2R8 423 aa25.46■■□□□ 1.67
EPHB3-202ENST00000473079 ZFYVE28Q9HCC9 887 aa25.46■■□□□ 1.67
EPHB3-202ENST00000473079 ZBTB40Q9NUA8 1239 aa25.46■■□□□ 1.67
EPHB3-202ENST00000473079 DDTLA6NHG4 134 aaPredicted RBP25.45■■□□□ 1.66
EPHB3-202ENST00000473079 HSP90AB4PQ58FF6 505 aa25.45■■□□□ 1.66
EPHB3-202ENST00000473079 ZSCAN29Q8IWY8 852 aaPredicted RBP25.45■■□□□ 1.66
EPHB3-202ENST00000473079 ERO1AQ96HE7 468 aa25.45■■□□□ 1.66
EPHB3-202ENST00000473079 CHMP4BQ9H444 224 aaKnown RBP25.45■■□□□ 1.66
EPHB3-202ENST00000473079 SNRKQ9NRH2 765 aa25.45■■□□□ 1.66
EPHB3-202ENST00000473079 KCNH4Q9UQ05 1017 aa25.45■■□□□ 1.66
EPHB3-202ENST00000473079 CYP2E1P05181 493 aaPredicted RBP25.44■■□□□ 1.66
EPHB3-202ENST00000473079 SP3Q02447 781 aa25.44■■□□□ 1.66
EPHB3-202ENST00000473079 TAF1CQ15572 869 aaPredicted RBP25.44■■□□□ 1.66
EPHB3-202ENST00000473079 CCDC8Q9H0W5 538 aaPredicted RBP25.44■■□□□ 1.66
EPHB3-202ENST00000473079 TBC1D12O60347 775 aa25.43■■□□□ 1.66
EPHB3-202ENST00000473079 PICALMQ13492 652 aa25.43■■□□□ 1.66
EPHB3-202ENST00000473079 TLR7Q9NYK1 1049 aaKnown RBP25.43■■□□□ 1.66
EPHB3-202ENST00000473079 EXOC6BQ9Y2D4 811 aa25.43■■□□□ 1.66
EPHB3-202ENST00000473079 COG6Q9Y2V7 657 aa25.43■■□□□ 1.66
EPHB3-202ENST00000473079 BTBD19C9JJ37 291 aa25.42■■□□□ 1.66
EPHB3-202ENST00000473079 ZAP70P43403 619 aa25.42■■□□□ 1.66
EPHB3-202ENST00000473079 PPP4CP60510 307 aa25.42■■□□□ 1.66
EPHB3-202ENST00000473079 NAA16Q6N069 864 aaPredicted RBP25.42■■□□□ 1.66
EPHB3-202ENST00000473079 OTOP1Q7RTM1 612 aa25.42■■□□□ 1.66
EPHB3-202ENST00000473079 COL2A1P02458 1487 aaPredicted RBP25.41■■□□□ 1.66
EPHB3-202ENST00000473079 BAG3O95817 575 aa25.41■■□□□ 1.66
EPHB3-202ENST00000473079 MLLT1Q03111 559 aaPredicted RBP25.41■■□□□ 1.66
EPHB3-202ENST00000473079 SCYL3Q8IZE3 742 aa25.41■■□□□ 1.66
EPHB3-202ENST00000473079 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.41■■□□□ 1.66
EPHB3-202ENST00000473079 CXCL11O14625 94 aa25.4■■□□□ 1.66
EPHB3-202ENST00000473079 HMMRO75330 724 aa25.4■■□□□ 1.66
EPHB3-202ENST00000473079 PDE3AQ14432 1141 aa25.4■■□□□ 1.66
EPHB3-202ENST00000473079 ANKRD23Q86SG2 305 aa25.4■■□□□ 1.66
EPHB3-202ENST00000473079 CD99L2Q8TCZ2 262 aa25.4■■□□□ 1.66
EPHB3-202ENST00000473079 NOL10Q9BSC4 688 aaKnown RBP25.4■■□□□ 1.66
EPHB3-202ENST00000473079 TRIM17Q9Y577 477 aa25.4■■□□□ 1.66
EPHB3-202ENST00000473079 AK9Q5TCS8 1911 aa25.39■■□□□ 1.66
EPHB3-202ENST00000473079 TLR2O60603 784 aa25.39■■□□□ 1.66
EPHB3-202ENST00000473079 CTNND1O60716 968 aaKnown RBP25.39■■□□□ 1.66
EPHB3-202ENST00000473079 PLCG2P16885 1265 aa25.39■■□□□ 1.66
EPHB3-202ENST00000473079 SIRT2Q8IXJ6 389 aa25.39■■□□□ 1.66
EPHB3-202ENST00000473079 TEX11Q8IYF3 940 aa25.39■■□□□ 1.66
EPHB3-202ENST00000473079 RHPN1Q8TCX5 695 aa25.39■■□□□ 1.66
EPHB3-202ENST00000473079 OSBPL5Q9H0X9 879 aaPredicted RBP25.39■■□□□ 1.66
EPHB3-202ENST00000473079 PIH1D3Q9NQM4 214 aaKnown RBP25.39■■□□□ 1.66
EPHB3-202ENST00000473079 PICK1Q9NRD5 415 aa25.39■■□□□ 1.66
EPHB3-202ENST00000473079 DOCK2Q92608 1830 aa25.39■■□□□ 1.65
EPHB3-202ENST00000473079 MOGSQ13724 837 aa25.38■■□□□ 1.65
EPHB3-202ENST00000473079 AACSQ86V21 672 aa25.38■■□□□ 1.65
EPHB3-202ENST00000473079 EFCC1Q9HA90 598 aa25.38■■□□□ 1.65
EPHB3-202ENST00000473079 PTPRAP18433 802 aa25.37■■□□□ 1.65
EPHB3-202ENST00000473079 ARHGEF6Q15052 776 aa25.37■■□□□ 1.65
EPHB3-202ENST00000473079 TMED8Q6PL24 325 aaPredicted RBP25.37■■□□□ 1.65
EPHB3-202ENST00000473079 SH3RF3Q8TEJ3 882 aaPredicted RBP25.37■■□□□ 1.65
EPHB3-202ENST00000473079 ZHX2Q9Y6X8 837 aa25.37■■□□□ 1.65
EPHB3-202ENST00000473079 ADGRA1Q86SQ6 560 aa25.36■■□□□ 1.65
EPHB3-202ENST00000473079 KIF1BPQ96EK5 621 aa25.36■■□□□ 1.65
EPHB3-202ENST00000473079 AATFQ9NY61 560 aaKnown RBP eCLIP25.36■■□□□ 1.65
EPHB3-202ENST00000473079 PTPN22Q9Y2R2 807 aa25.36■■□□□ 1.65
EPHB3-202ENST00000473079 SLURP2P0DP57 97 aa25.35■■□□□ 1.65
EPHB3-202ENST00000473079 DHX36Q9H2U1 1008 aaKnown RBP25.35■■□□□ 1.65
EPHB3-202ENST00000473079 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.35■■□□□ 1.65
EPHB3-202ENST00000473079 AFG3L2Q9Y4W6 797 aa25.35■■□□□ 1.65
EPHB3-202ENST00000473079 MAST2Q6P0Q8 1798 aa25.34■■□□□ 1.65
EPHB3-202ENST00000473079 PDHXO00330 501 aa25.34■■□□□ 1.65
EPHB3-202ENST00000473079 RAB11FIP3O75154 756 aa25.34■■□□□ 1.65
EPHB3-202ENST00000473079 SOX10P56693 466 aa25.34■■□□□ 1.65
EPHB3-202ENST00000473079 CAP1Q01518 475 aa25.34■■□□□ 1.65
EPHB3-202ENST00000473079 CLASRPQ8N2M8 674 aaKnown RBP25.34■■□□□ 1.65
EPHB3-202ENST00000473079 IL1RAPL2Q9NP60 686 aa25.34■■□□□ 1.65
EPHB3-202ENST00000473079 HERC5Q9UII4 1024 aaKnown RBP25.34■■□□□ 1.65
EPHB3-202ENST00000473079 A0A0G2JLL6 359 aaPredicted RBP25.33■■□□□ 1.65
EPHB3-202ENST00000473079 C17orf99Q6UX52 265 aa25.33■■□□□ 1.65
EPHB3-202ENST00000473079 FASTKD5Q7L8L6 764 aaKnown RBP25.33■■□□□ 1.65
EPHB3-202ENST00000473079 PRRT2Q7Z6L0 340 aaPredicted RBP25.33■■□□□ 1.65
EPHB3-202ENST00000473079 CERS3Q8IU89 383 aa25.33■■□□□ 1.65
EPHB3-202ENST00000473079 PI4KBQ9UBF8 816 aa25.33■■□□□ 1.65
EPHB3-202ENST00000473079 IDH1O75874 414 aaKnown RBP25.32■■□□□ 1.64
EPHB3-202ENST00000473079 C20orf194Q5TEA3 1177 aa25.32■■□□□ 1.64
EPHB3-202ENST00000473079 GPAT2Q6NUI2 795 aa25.32■■□□□ 1.64
EPHB3-202ENST00000473079 CYP7A1P22680 504 aa25.31■■□□□ 1.64
EPHB3-202ENST00000473079 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.31■■□□□ 1.64
EPHB3-202ENST00000473079 TGFBRAP1Q8WUH2 860 aa25.31■■□□□ 1.64
EPHB3-202ENST00000473079 LACTBP83111 547 aaPredicted RBP25.3■■□□□ 1.64
EPHB3-202ENST00000473079 MAP3K12Q12852 859 aa25.3■■□□□ 1.64
EPHB3-202ENST00000473079 METTL16Q86W50 562 aaKnown RBP25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms