RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 HMGCRP04035 888 aa17.49■□□□□ 0.39
SMURF1-203ENST00000472627 CDC42EP5Q6NZY7 148 aa17.49■□□□□ 0.39
SMURF1-203ENST00000472627 UBE2OQ9C0C9 1292 aaKnown RBP17.49■□□□□ 0.39
SMURF1-203ENST00000472627 NCBP3Q53F19 620 aaKnown RBP17.48■□□□□ 0.39
SMURF1-203ENST00000472627 Q7L0L9 218 aa17.48■□□□□ 0.39
SMURF1-203ENST00000472627 SUCLG2Q96I99 432 aa17.48■□□□□ 0.39
SMURF1-203ENST00000472627 C11orf49Q9H6J7 331 aa17.48■□□□□ 0.39
SMURF1-203ENST00000472627 HMX1Q9NP08 348 aaPredicted RBP17.48■□□□□ 0.39
SMURF1-203ENST00000472627 USP40Q9NVE5 1235 aa17.48■□□□□ 0.39
SMURF1-203ENST00000472627 MTMR10Q9NXD2 777 aa17.48■□□□□ 0.39
SMURF1-203ENST00000472627 DAGLAQ9Y4D2 1042 aa17.48■□□□□ 0.39
SMURF1-203ENST00000472627 SLC5A1P13866 664 aa17.47■□□□□ 0.39
SMURF1-203ENST00000472627 PTPRAP18433 802 aa17.47■□□□□ 0.39
SMURF1-203ENST00000472627 MAGEA10P43363 369 aaPredicted RBP17.47■□□□□ 0.39
SMURF1-203ENST00000472627 FAM110CQ1W6H9 321 aa17.47■□□□□ 0.39
SMURF1-203ENST00000472627 ZSCAN29Q8IWY8 852 aaPredicted RBP17.47■□□□□ 0.39
SMURF1-203ENST00000472627 ANKRD13CQ8N6S4 541 aa17.47■□□□□ 0.39
SMURF1-203ENST00000472627 DIS3LQ8TF46 1054 aaKnown RBP17.47■□□□□ 0.39
SMURF1-203ENST00000472627 GNL3LQ9NVN8 582 aaKnown RBP17.47■□□□□ 0.39
SMURF1-203ENST00000472627 AGTPBP1Q9UPW5 1226 aa17.47■□□□□ 0.39
SMURF1-203ENST00000472627 AFG3L2Q9Y4W6 797 aa17.47■□□□□ 0.39
SMURF1-203ENST00000472627 RPTORQ8N122 1335 aa17.47■□□□□ 0.39
SMURF1-203ENST00000472627 LDHBP07195 334 aaKnown RBP17.46■□□□□ 0.39
SMURF1-203ENST00000472627 NFIAQ12857 509 aa17.46■□□□□ 0.39
SMURF1-203ENST00000472627 PABPC4Q13310 644 aaKnown RBP eCLIP17.46■□□□□ 0.39
SMURF1-203ENST00000472627 LRRC24Q50LG9 513 aa17.46■□□□□ 0.39
SMURF1-203ENST00000472627 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.46■□□□□ 0.39
SMURF1-203ENST00000472627 VGLL2Q8N8G2 317 aa17.46■□□□□ 0.39
SMURF1-203ENST00000472627 TRIM75PA6NK02 468 aa17.45■□□□□ 0.38
SMURF1-203ENST00000472627 CTNND1O60716 968 aaKnown RBP17.45■□□□□ 0.38
SMURF1-203ENST00000472627 ENTPD3O75355 529 aa17.45■□□□□ 0.38
SMURF1-203ENST00000472627 GCLCP48506 637 aaPredicted RBP17.45■□□□□ 0.38
SMURF1-203ENST00000472627 EXOSC9Q06265 439 aaKnown RBP17.45■□□□□ 0.38
SMURF1-203ENST00000472627 RABL6Q3YEC7 729 aaPredicted RBP17.45■□□□□ 0.38
SMURF1-203ENST00000472627 COL25A1Q9BXS0 654 aaPredicted RBP17.45■□□□□ 0.38
SMURF1-203ENST00000472627 BICC1Q9H694 974 aaKnown RBP17.45■□□□□ 0.38
SMURF1-203ENST00000472627 FAM198AQ9UFP1 575 aa17.45■□□□□ 0.38
SMURF1-203ENST00000472627 SYN1P17600 705 aa17.44■□□□□ 0.38
SMURF1-203ENST00000472627 DIXDC1Q155Q3 683 aa17.44■□□□□ 0.38
SMURF1-203ENST00000472627 WDR63Q8IWG1 891 aa17.44■□□□□ 0.38
SMURF1-203ENST00000472627 LPIN2Q92539 896 aa17.44■□□□□ 0.38
SMURF1-203ENST00000472627 PHF20L1A8MW92 1017 aa17.43■□□□□ 0.38
SMURF1-203ENST00000472627 NBPF7P0C2Y1 421 aaPredicted RBP17.43■□□□□ 0.38
SMURF1-203ENST00000472627 SLF2Q8IX21 1173 aa17.43■□□□□ 0.38
SMURF1-203ENST00000472627 ZGPATQ8N5A5 531 aaKnown RBP17.43■□□□□ 0.38
SMURF1-203ENST00000472627 PROCA1Q8NCQ7 364 aaPredicted RBP17.43■□□□□ 0.38
SMURF1-203ENST00000472627 UTYO14607 1347 aa17.43■□□□□ 0.38
SMURF1-203ENST00000472627 RGS3P49796 1198 aa17.42■□□□□ 0.38
SMURF1-203ENST00000472627 KAZALD1Q96I82 304 aa17.42■□□□□ 0.38
SMURF1-203ENST00000472627 IDI2Q9BXS1 227 aa17.42■□□□□ 0.38
SMURF1-203ENST00000472627 TBC1D2Q9BYX2 928 aa17.42■□□□□ 0.38
SMURF1-203ENST00000472627 SPINK5Q9NQ38 1064 aaPredicted RBP17.42■□□□□ 0.38
SMURF1-203ENST00000472627 DOCK2Q92608 1830 aa17.42■□□□□ 0.38
SMURF1-203ENST00000472627 ALPK3Q96L96 1907 aa17.41■□□□□ 0.38
SMURF1-203ENST00000472627 MYH13Q9UKX3 1938 aa17.41■□□□□ 0.38
SMURF1-203ENST00000472627 FGFR2P21802 821 aa17.41■□□□□ 0.38
SMURF1-203ENST00000472627 PRDX5P30044 214 aa17.41■□□□□ 0.38
SMURF1-203ENST00000472627 OGDHLQ9ULD0 1010 aa17.41■□□□□ 0.38
SMURF1-203ENST00000472627 ATRNL1Q5VV63 1379 aa17.4■□□□□ 0.38
SMURF1-203ENST00000472627 SEMA3EO15041 775 aa17.4■□□□□ 0.38
SMURF1-203ENST00000472627 FAM109BQ6ICB4 259 aaPredicted RBP17.4■□□□□ 0.38
SMURF1-203ENST00000472627 TRMT44Q8IYL2 757 aaKnown RBP17.4■□□□□ 0.38
SMURF1-203ENST00000472627 DENND2AQ9ULE3 1009 aa17.4■□□□□ 0.38
SMURF1-203ENST00000472627 SALL1Q9NSC2 1324 aa17.4■□□□□ 0.38
SMURF1-203ENST00000472627 MAP3K10Q02779 954 aa17.39■□□□□ 0.37
SMURF1-203ENST00000472627 DZIP1Q86YF9 867 aaKnown RBP17.39■□□□□ 0.37
SMURF1-203ENST00000472627 ZFPM1Q8IX07 1006 aa17.39■□□□□ 0.37
SMURF1-203ENST00000472627 ANKRD44Q8N8A2 993 aa17.39■□□□□ 0.37
SMURF1-203ENST00000472627 SOCS4Q8WXH5 440 aa17.39■□□□□ 0.37
SMURF1-203ENST00000472627 LBHD1Q9BQE6 289 aaPredicted RBP17.39■□□□□ 0.37
SMURF1-203ENST00000472627 DOCK1Q14185 1865 aa17.39■□□□□ 0.37
SMURF1-203ENST00000472627 DDX60LQ5H9U9 1706 aaKnown RBP17.38■□□□□ 0.37
SMURF1-203ENST00000472627 EYA2O00167 538 aa17.38■□□□□ 0.37
SMURF1-203ENST00000472627 PDE3AQ14432 1141 aa17.38■□□□□ 0.37
SMURF1-203ENST00000472627 TREML2Q5T2D2 321 aa17.38■□□□□ 0.37
SMURF1-203ENST00000472627 KLHDC4Q8TBB5 520 aa17.38■□□□□ 0.37
SMURF1-203ENST00000472627 PRKAR2AP13861 404 aaKnown RBP17.37■□□□□ 0.37
SMURF1-203ENST00000472627 CCAR1Q8IX12 1150 aaKnown RBP17.37■□□□□ 0.37
SMURF1-203ENST00000472627 ZNF280CQ8ND82 737 aa17.37■□□□□ 0.37
SMURF1-203ENST00000472627 TBC1D12O60347 775 aa17.36■□□□□ 0.37
SMURF1-203ENST00000472627 PICALMQ13492 652 aa17.36■□□□□ 0.37
SMURF1-203ENST00000472627 ATP2B3Q16720 1220 aa17.36■□□□□ 0.37
SMURF1-203ENST00000472627 ZNF697Q5TEC3 545 aa17.36■□□□□ 0.37
SMURF1-203ENST00000472627 SPTY2D1Q68D10 685 aaPredicted RBP17.36■□□□□ 0.37
SMURF1-203ENST00000472627 NUDT12Q9BQG2 462 aa17.36■□□□□ 0.37
SMURF1-203ENST00000472627 OSBPL5Q9H0X9 879 aaPredicted RBP17.36■□□□□ 0.37
SMURF1-203ENST00000472627 AS3MTQ9HBK9 375 aa17.36■□□□□ 0.37
SMURF1-203ENST00000472627 GJD2Q9UKL4 321 aa17.36■□□□□ 0.37
SMURF1-203ENST00000472627 PTPRFP10586 1907 aa17.36■□□□□ 0.37
SMURF1-203ENST00000472627 UNC80Q8N2C7 3258 aa17.36■□□□□ 0.37
SMURF1-203ENST00000472627 GAKO14976 1311 aa17.36■□□□□ 0.37
SMURF1-203ENST00000472627 XRCC5P13010 732 aaKnown RBP17.35■□□□□ 0.37
SMURF1-203ENST00000472627 ZKSCAN1P17029 563 aaPredicted RBP17.35■□□□□ 0.37
SMURF1-203ENST00000472627 CYP2B6P20813 491 aa17.35■□□□□ 0.37
SMURF1-203ENST00000472627 IRX3P78415 501 aaPredicted RBP17.35■□□□□ 0.37
SMURF1-203ENST00000472627 MDM2Q00987 491 aaPredicted RBP17.35■□□□□ 0.37
SMURF1-203ENST00000472627 SPP2Q13103 211 aa17.35■□□□□ 0.37
SMURF1-203ENST00000472627 TRIB2Q92519 343 aa17.35■□□□□ 0.37
SMURF1-203ENST00000472627 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.35■□□□□ 0.37
SMURF1-203ENST00000472627 PRKAG2Q9UGJ0 569 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms