RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 GPRC5DQ9NZD1 345 aa23.12■■□□□ 1.29
CHMP2B-204ENST00000472024 TAOK2Q9UL54 1235 aa23.12■■□□□ 1.29
CHMP2B-204ENST00000472024 PCP11498 1178 aaKnown RBP23.11■■□□□ 1.29
CHMP2B-204ENST00000472024 USP5P45974 858 aa23.11■■□□□ 1.29
CHMP2B-204ENST00000472024 NT5C2P49902 561 aa23.11■■□□□ 1.29
CHMP2B-204ENST00000472024 MICALL2Q8IY33 904 aa23.11■■□□□ 1.29
CHMP2B-204ENST00000472024 ZSWIM6Q9HCJ5 1215 aa23.11■■□□□ 1.29
CHMP2B-204ENST00000472024 CNOT7Q9UIV1 285 aaKnown RBP23.11■■□□□ 1.29
CHMP2B-204ENST00000472024 GJA3Q9Y6H8 435 aa23.11■■□□□ 1.29
CHMP2B-204ENST00000472024 BAZ2AQ9UIF9 1905 aaKnown RBP23.1■■□□□ 1.29
CHMP2B-204ENST00000472024 ENTPD3O75355 529 aa23.1■■□□□ 1.29
CHMP2B-204ENST00000472024 PPARAQ07869 468 aa23.1■■□□□ 1.29
CHMP2B-204ENST00000472024 C12orf60Q5U649 245 aa23.1■■□□□ 1.29
CHMP2B-204ENST00000472024 STOX1Q6ZVD7 989 aa23.1■■□□□ 1.29
CHMP2B-204ENST00000472024 STAG1Q8WVM7 1258 aa23.1■■□□□ 1.29
CHMP2B-204ENST00000472024 DDX4Q9NQI0 724 aaKnown RBP23.1■■□□□ 1.29
CHMP2B-204ENST00000472024 USP17L12C9JPN9 530 aa23.09■■□□□ 1.29
CHMP2B-204ENST00000472024 USP17L21D6R901 530 aa23.09■■□□□ 1.29
CHMP2B-204ENST00000472024 E7EWF7 191 aa23.09■■□□□ 1.29
CHMP2B-204ENST00000472024 WNT10BO00744 389 aa23.09■■□□□ 1.29
CHMP2B-204ENST00000472024 PSMA5P28066 241 aa23.09■■□□□ 1.29
CHMP2B-204ENST00000472024 RBM5P52756 815 aaKnown RBP eCLIP23.09■■□□□ 1.29
CHMP2B-204ENST00000472024 ADCK5Q3MIX3 580 aa23.09■■□□□ 1.29
CHMP2B-204ENST00000472024 TBC1D10CQ8IV04 446 aa23.09■■□□□ 1.29
CHMP2B-204ENST00000472024 OSBPL5Q9H0X9 879 aaPredicted RBP23.09■■□□□ 1.29
CHMP2B-204ENST00000472024 ATRNL1Q5VV63 1379 aa23.09■■□□□ 1.29
CHMP2B-204ENST00000472024 SHTN1A0MZ66 631 aa23.08■■□□□ 1.29
CHMP2B-204ENST00000472024 NFIAQ12857 509 aa23.08■■□□□ 1.29
CHMP2B-204ENST00000472024 MAPKAPK5Q8IW41 473 aa23.08■■□□□ 1.29
CHMP2B-204ENST00000472024 ZNF70Q9UC06 446 aaPredicted RBP23.08■■□□□ 1.29
CHMP2B-204ENST00000472024 FAM198AQ9UFP1 575 aa23.08■■□□□ 1.29
CHMP2B-204ENST00000472024 H7C1D1 291 aa23.07■■□□□ 1.28
CHMP2B-204ENST00000472024 HMGB1P09429 215 aaKnown RBP23.07■■□□□ 1.28
CHMP2B-204ENST00000472024 AKNAD1Q5T1N1 836 aa23.07■■□□□ 1.28
CHMP2B-204ENST00000472024 ALDH8A1Q9H2A2 487 aaPredicted RBP23.07■■□□□ 1.28
CHMP2B-204ENST00000472024 RNF41Q9H4P4 317 aaPredicted RBP23.07■■□□□ 1.28
CHMP2B-204ENST00000472024 TDRD3Q9H7E2 651 aaKnown RBP23.07■■□□□ 1.28
CHMP2B-204ENST00000472024 MCM9Q9NXL9 1143 aa23.07■■□□□ 1.28
CHMP2B-204ENST00000472024 MYH1P12882 1939 aa23.06■■□□□ 1.28
CHMP2B-204ENST00000472024 GLTPD2A6NH11 291 aa23.06■■□□□ 1.28
CHMP2B-204ENST00000472024 DDNO94850 711 aaPredicted RBP23.06■■□□□ 1.28
CHMP2B-204ENST00000472024 YY1P25490 414 aa23.06■■□□□ 1.28
CHMP2B-204ENST00000472024 HAND2P61296 217 aa23.06■■□□□ 1.28
CHMP2B-204ENST00000472024 DPY19L2Q6NUT2 758 aa23.06■■□□□ 1.28
CHMP2B-204ENST00000472024 FAM83AQ86UY5 434 aa23.06■■□□□ 1.28
CHMP2B-204ENST00000472024 SNX21Q969T3 373 aa23.06■■□□□ 1.28
CHMP2B-204ENST00000472024 JAKMIP1Q96N16 626 aaKnown RBP23.06■■□□□ 1.28
CHMP2B-204ENST00000472024 NEK1Q96PY6 1258 aa23.06■■□□□ 1.28
CHMP2B-204ENST00000472024 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.06■■□□□ 1.28
CHMP2B-204ENST00000472024 WDR19Q8NEZ3 1342 aa23.06■■□□□ 1.28
CHMP2B-204ENST00000472024 WDR90Q96KV7 1748 aa23.05■■□□□ 1.28
CHMP2B-204ENST00000472024 KIF4BQ2VIQ3 1234 aa23.05■■□□□ 1.28
CHMP2B-204ENST00000472024 METTL16Q86W50 562 aaKnown RBP23.05■■□□□ 1.28
CHMP2B-204ENST00000472024 AMOTL1Q8IY63 956 aa23.05■■□□□ 1.28
CHMP2B-204ENST00000472024 FBXL16Q8N461 479 aa23.05■■□□□ 1.28
CHMP2B-204ENST00000472024 TTC14Q96N46 770 aa23.05■■□□□ 1.28
CHMP2B-204ENST00000472024 EHD4Q9H223 541 aa23.05■■□□□ 1.28
CHMP2B-204ENST00000472024 DHX36Q9H2U1 1008 aaKnown RBP23.05■■□□□ 1.28
CHMP2B-204ENST00000472024 TMOD2Q9NZR1 351 aa23.05■■□□□ 1.28
CHMP2B-204ENST00000472024 TACC3Q9Y6A5 838 aa23.05■■□□□ 1.28
CHMP2B-204ENST00000472024 MYO1BO43795 1136 aa23.04■■□□□ 1.28
CHMP2B-204ENST00000472024 ORC4O43929 436 aa23.04■■□□□ 1.28
CHMP2B-204ENST00000472024 EGFRP00533 1210 aa23.04■■□□□ 1.28
CHMP2B-204ENST00000472024 GABPAQ06546 454 aa23.04■■□□□ 1.28
CHMP2B-204ENST00000472024 NBPF9Q3BBW0 867 aa23.04■■□□□ 1.28
CHMP2B-204ENST00000472024 RUFY3Q7L099 469 aa23.04■■□□□ 1.28
CHMP2B-204ENST00000472024 MB21D2Q8IYB1 491 aaPredicted RBP23.04■■□□□ 1.28
CHMP2B-204ENST00000472024 CNNM2Q9H8M5 875 aa23.04■■□□□ 1.28
CHMP2B-204ENST00000472024 CNTNAP1P78357 1384 aa23.03■■□□□ 1.28
CHMP2B-204ENST00000472024 CYP2D7A0A087X1C5 515 aa23.03■■□□□ 1.28
CHMP2B-204ENST00000472024 SLC3A2P08195 630 aaKnown RBP23.03■■□□□ 1.28
CHMP2B-204ENST00000472024 CYP2D6P10635 497 aa23.03■■□□□ 1.28
CHMP2B-204ENST00000472024 RPS6KB1P23443 525 aa23.03■■□□□ 1.28
CHMP2B-204ENST00000472024 EXOSC10Q01780 885 aaKnown RBP23.03■■□□□ 1.28
CHMP2B-204ENST00000472024 TTC6Q86TZ1 520 aa23.03■■□□□ 1.28
CHMP2B-204ENST00000472024 NCOA7Q8NI08 942 aa23.03■■□□□ 1.28
CHMP2B-204ENST00000472024 FAM151AQ8WW52 585 aa23.03■■□□□ 1.28
CHMP2B-204ENST00000472024 MTA3Q9BTC8 594 aa23.03■■□□□ 1.28
CHMP2B-204ENST00000472024 ADARB2Q9NS39 739 aaKnown RBP23.03■■□□□ 1.28
CHMP2B-204ENST00000472024 CYP46A1Q9Y6A2 500 aa23.03■■□□□ 1.28
CHMP2B-204ENST00000472024 MINDY4BA8MYZ0 360 aa23.02■■□□□ 1.28
CHMP2B-204ENST00000472024 CASTP20810 708 aaKnown RBP23.02■■□□□ 1.28
CHMP2B-204ENST00000472024 ANP32AP39687 249 aaKnown RBP23.02■■□□□ 1.28
CHMP2B-204ENST00000472024 EPS15P42566 896 aa23.02■■□□□ 1.28
CHMP2B-204ENST00000472024 PLCD1P51178 756 aa23.02■■□□□ 1.28
CHMP2B-204ENST00000472024 CTDSPL2Q05D32 466 aa23.02■■□□□ 1.28
CHMP2B-204ENST00000472024 BLOC1S2Q6QNY1 142 aa23.02■■□□□ 1.28
CHMP2B-204ENST00000472024 MFSD6Q6ZSS7 791 aa23.02■■□□□ 1.28
CHMP2B-204ENST00000472024 C16orf86Q6ZW13 317 aa23.02■■□□□ 1.28
CHMP2B-204ENST00000472024 DHX32Q7L7V1 743 aaKnown RBP23.02■■□□□ 1.28
CHMP2B-204ENST00000472024 SAMD7Q7Z3H4 446 aa23.02■■□□□ 1.28
CHMP2B-204ENST00000472024 AGXT2Q9BYV1 514 aa23.02■■□□□ 1.28
CHMP2B-204ENST00000472024 KRT23Q9C075 422 aa23.02■■□□□ 1.28
CHMP2B-204ENST00000472024 PGAP2Q9UHJ9 254 aa23.02■■□□□ 1.28
CHMP2B-204ENST00000472024 SIPA1L1O43166 1804 aa23.02■■□□□ 1.28
CHMP2B-204ENST00000472024 SCN4AP35499 1836 aa23.02■■□□□ 1.28
CHMP2B-204ENST00000472024 NEDD4P46934 1319 aa23.02■■□□□ 1.28
CHMP2B-204ENST00000472024 POLR3DP05423 398 aaPredicted RBP23.01■■□□□ 1.27
CHMP2B-204ENST00000472024 LMOD1P29536 600 aaPredicted RBP23.01■■□□□ 1.27
CHMP2B-204ENST00000472024 PICALMQ13492 652 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms