RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 PICK1Q9NRD5 415 aa23.9■■□□□ 1.42
SORT1-203ENST00000471996 AFG3L2Q9Y4W6 797 aa23.9■■□□□ 1.42
SORT1-203ENST00000471996 IFIT1P09914 478 aaKnown RBP23.89■■□□□ 1.41
SORT1-203ENST00000471996 PTPRAP18433 802 aa23.89■■□□□ 1.41
SORT1-203ENST00000471996 DIXDC1Q155Q3 683 aa23.89■■□□□ 1.41
SORT1-203ENST00000471996 Q7L0L9 218 aa23.89■■□□□ 1.41
SORT1-203ENST00000471996 C7orf61Q8IZ16 206 aa23.89■■□□□ 1.41
SORT1-203ENST00000471996 ANKLE1Q8NAG6 615 aa23.89■■□□□ 1.41
SORT1-203ENST00000471996 SMCR8Q8TEV9 937 aaPredicted RBP23.89■■□□□ 1.41
SORT1-203ENST00000471996 COA7Q96BR5 231 aa23.89■■□□□ 1.41
SORT1-203ENST00000471996 ZMYND8Q9ULU4 1186 aaPredicted RBP23.89■■□□□ 1.41
SORT1-203ENST00000471996 MGAMO43451 1857 aa23.89■■□□□ 1.41
SORT1-203ENST00000471996 PUM3Q15397 648 aaKnown RBP23.88■■□□□ 1.41
SORT1-203ENST00000471996 ZFPM1Q8IX07 1006 aa23.88■■□□□ 1.41
SORT1-203ENST00000471996 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.88■■□□□ 1.411e-14■■■□□ 17.6
SORT1-203ENST00000471996 USP40Q9NVE5 1235 aa23.88■■□□□ 1.41
SORT1-203ENST00000471996 TAOK2Q9UL54 1235 aa23.88■■□□□ 1.41
SORT1-203ENST00000471996 ATRNL1Q5VV63 1379 aa23.88■■□□□ 1.41
SORT1-203ENST00000471996 ZEB1P37275 1124 aaPredicted RBP23.87■■□□□ 1.41
SORT1-203ENST00000471996 WDR63Q8IWG1 891 aa23.87■■□□□ 1.41
SORT1-203ENST00000471996 ANKRD44Q8N8A2 993 aa23.87■■□□□ 1.41
SORT1-203ENST00000471996 MTMR10Q9NXD2 777 aa23.87■■□□□ 1.41
SORT1-203ENST00000471996 KLHDC4Q8TBB5 520 aa23.86■■□□□ 1.41
SORT1-203ENST00000471996 PRDX5P30044 214 aa23.85■■□□□ 1.41
SORT1-203ENST00000471996 MAGEA10P43363 369 aaPredicted RBP23.84■■□□□ 1.41
SORT1-203ENST00000471996 MAP3K10Q02779 954 aa23.84■■□□□ 1.41
SORT1-203ENST00000471996 CCDC184Q52MB2 194 aa23.84■■□□□ 1.41
SORT1-203ENST00000471996 TDHQ8IZJ6 230 aa23.84■■□□□ 1.41
SORT1-203ENST00000471996 ANKRD13CQ8N6S4 541 aa23.84■■□□□ 1.41
SORT1-203ENST00000471996 NBPF3Q9H094 633 aa23.84■■□□□ 1.41
SORT1-203ENST00000471996 SLC5A1P13866 664 aa23.83■■□□□ 1.41
SORT1-203ENST00000471996 SYN1P17600 705 aa23.83■■□□□ 1.41
SORT1-203ENST00000471996 LPIN2Q92539 896 aa23.83■■□□□ 1.41
SORT1-203ENST00000471996 AGTPBP1Q9UPW5 1226 aa23.83■■□□□ 1.41
SORT1-203ENST00000471996 ALPK3Q96L96 1907 aa23.82■■□□□ 1.4
SORT1-203ENST00000471996 ENTPD3O75355 529 aa23.82■■□□□ 1.4
SORT1-203ENST00000471996 HMGCRP04035 888 aa23.82■■□□□ 1.4
SORT1-203ENST00000471996 LDHBP07195 334 aaKnown RBP23.82■■□□□ 1.4
SORT1-203ENST00000471996 RGS3P49796 1198 aa23.82■■□□□ 1.4
SORT1-203ENST00000471996 FAM110CQ1W6H9 321 aa23.82■■□□□ 1.4
SORT1-203ENST00000471996 COL25A1Q9BXS0 654 aaPredicted RBP23.82■■□□□ 1.4
SORT1-203ENST00000471996 IDI2Q9BXS1 227 aa23.82■■□□□ 1.4
SORT1-203ENST00000471996 SPINK5Q9NQ38 1064 aaPredicted RBP23.82■■□□□ 1.4
SORT1-203ENST00000471996 LRRFIP2Q9Y608 721 aaKnown RBP23.82■■□□□ 1.4
SORT1-203ENST00000471996 RPTORQ8N122 1335 aa23.82■■□□□ 1.4
SORT1-203ENST00000471996 TRIM75PA6NK02 468 aa23.81■■□□□ 1.4
SORT1-203ENST00000471996 CTNND1O60716 968 aaKnown RBP23.81■■□□□ 1.4
SORT1-203ENST00000471996 SH3BP5LQ7L8J4 393 aa23.81■■□□□ 1.4
SORT1-203ENST00000471996 HMX1Q9NP08 348 aaPredicted RBP23.81■■□□□ 1.4
SORT1-203ENST00000471996 UNC80Q8N2C7 3258 aa23.8■■□□□ 1.4
SORT1-203ENST00000471996 C11orf49Q9H6J7 331 aa23.8■■□□□ 1.4
SORT1-203ENST00000471996 PNMA3Q9UL41 463 aa23.8■■□□□ 1.4
SORT1-203ENST00000471996 SALL2Q9Y467 1007 aaPredicted RBP23.8■■□□□ 1.4
SORT1-203ENST00000471996 AK9Q5TCS8 1911 aa23.79■■□□□ 1.4
SORT1-203ENST00000471996 TREML2Q5T2D2 321 aa23.79■■□□□ 1.4
SORT1-203ENST00000471996 ZSCAN29Q8IWY8 852 aaPredicted RBP23.79■■□□□ 1.4
SORT1-203ENST00000471996 UBE2OQ9C0C9 1292 aaKnown RBP23.79■■□□□ 1.4
SORT1-203ENST00000471996 GJD2Q9UKL4 321 aa23.79■■□□□ 1.4
SORT1-203ENST00000471996 SALL1Q9NSC2 1324 aa23.79■■□□□ 1.4
SORT1-203ENST00000471996 EYA2O00167 538 aa23.78■■□□□ 1.4
SORT1-203ENST00000471996 SLURP2P0DP57 97 aa23.78■■□□□ 1.4
SORT1-203ENST00000471996 OGDHLQ9ULD0 1010 aa23.78■■□□□ 1.4
SORT1-203ENST00000471996 DDTLA6NHG4 134 aaPredicted RBP23.77■■□□□ 1.4
SORT1-203ENST00000471996 TRIM32Q13049 653 aa23.77■■□□□ 1.4
SORT1-203ENST00000471996 CCDC84Q86UT8 332 aaPredicted RBP23.77■■□□□ 1.4
SORT1-203ENST00000471996 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.77■■□□□ 1.4
SORT1-203ENST00000471996 RFX7Q2KHR2 1363 aa23.77■■□□□ 1.4
SORT1-203ENST00000471996 GCLCP48506 637 aaPredicted RBP23.76■■□□□ 1.39
SORT1-203ENST00000471996 PROCA1Q8NCQ7 364 aaPredicted RBP23.76■■□□□ 1.39
SORT1-203ENST00000471996 GNL3LQ9NVN8 582 aaKnown RBP23.76■■□□□ 1.39
SORT1-203ENST00000471996 RFX5P48382 616 aaPredicted RBP23.75■■□□□ 1.39
SORT1-203ENST00000471996 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.75■■□□□ 1.39
SORT1-203ENST00000471996 DENND2AQ9ULE3 1009 aa23.75■■□□□ 1.39
SORT1-203ENST00000471996 GAKO14976 1311 aa23.75■■□□□ 1.39
SORT1-203ENST00000471996 DOCK2Q92608 1830 aa23.73■■□□□ 1.39
SORT1-203ENST00000471996 SEMA3EO15041 775 aa23.73■■□□□ 1.39
SORT1-203ENST00000471996 ATG9AQ7Z3C6 839 aa23.73■■□□□ 1.39
SORT1-203ENST00000471996 DDX4Q9NQI0 724 aaKnown RBP23.73■■□□□ 1.39
SORT1-203ENST00000471996 PFASO15067 1338 aa23.73■■□□□ 1.39
SORT1-203ENST00000471996 PTPRFP10586 1907 aa23.72■■□□□ 1.39
SORT1-203ENST00000471996 DOCK3Q8IZD9 2030 aa23.72■■□□□ 1.39
SORT1-203ENST00000471996 TBC1D12O60347 775 aa23.72■■□□□ 1.39
SORT1-203ENST00000471996 PABPC4Q13310 644 aaKnown RBP eCLIP23.72■■□□□ 1.39
SORT1-203ENST00000471996 ATP2B3Q16720 1220 aa23.72■■□□□ 1.39
SORT1-203ENST00000471996 MAP3K21Q5TCX8 1036 aa23.72■■□□□ 1.39
SORT1-203ENST00000471996 TRIB2Q92519 343 aa23.72■■□□□ 1.39
SORT1-203ENST00000471996 USP44Q9H0E7 712 aa23.72■■□□□ 1.39
SORT1-203ENST00000471996 SPP2Q13103 211 aa23.71■■□□□ 1.39
SORT1-203ENST00000471996 PICALMQ13492 652 aa23.71■■□□□ 1.39
SORT1-203ENST00000471996 ZGPATQ8N5A5 531 aaKnown RBP23.71■■□□□ 1.39
SORT1-203ENST00000471996 FAM163AQ96GL9 167 aaPredicted RBP23.71■■□□□ 1.39
SORT1-203ENST00000471996 PHIPQ8WWQ0 1821 aa23.7■■□□□ 1.39
SORT1-203ENST00000471996 DDX60LQ5H9U9 1706 aaKnown RBP23.7■■□□□ 1.39
SORT1-203ENST00000471996 POTEB2H3BUK9 544 aa23.7■■□□□ 1.38
SORT1-203ENST00000471996 ZBTB22O15209 634 aa23.7■■□□□ 1.38
SORT1-203ENST00000471996 PHKA1P46020 1223 aa23.7■■□□□ 1.38
SORT1-203ENST00000471996 FAM109BQ6ICB4 259 aaPredicted RBP23.7■■□□□ 1.38
SORT1-203ENST00000471996 ZNF280CQ8ND82 737 aa23.7■■□□□ 1.38
SORT1-203ENST00000471996 ASCC2Q9H1I8 757 aaPredicted RBP23.7■■□□□ 1.38
SORT1-203ENST00000471996 MYH13Q9UKX3 1938 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms