RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 TRIM42Q8IWZ5 723 aa8.75□□□□□ -1.01
HDAC9-221ENST00000471887 PHC3Q8NDX5 983 aa8.75□□□□□ -1.01
HDAC9-221ENST00000471887 EZH1Q92800 747 aaPredicted RBP8.75□□□□□ -1.01
HDAC9-221ENST00000471887 ACSS3Q9H6R3 686 aa8.75□□□□□ -1.01
HDAC9-221ENST00000471887 C7orf69Q9H7B7 122 aa8.75□□□□□ -1.01
HDAC9-221ENST00000471887 PCDHB5Q9Y5E4 795 aa8.75□□□□□ -1.01
HDAC9-221ENST00000471887 HMX2A2RU54 273 aa8.74□□□□□ -1.01
HDAC9-221ENST00000471887 GSC2O15499 205 aa8.74□□□□□ -1.01
HDAC9-221ENST00000471887 RECKO95980 971 aa8.74□□□□□ -1.01
HDAC9-221ENST00000471887 GBP2P32456 591 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-221ENST00000471887 PTPN11Q06124 597 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-221ENST00000471887 SEPT6Q14141 434 aa8.74□□□□□ -1.01
HDAC9-221ENST00000471887 MAP7Q14244 749 aa8.74□□□□□ -1.01
HDAC9-221ENST00000471887 LDLRAD1Q5T700 205 aa8.74□□□□□ -1.01
HDAC9-221ENST00000471887 DIEXFQ68CQ4 756 aaKnown RBP8.74□□□□□ -1.01
HDAC9-221ENST00000471887 ELMO3Q96BJ8 720 aa8.74□□□□□ -1.01
HDAC9-221ENST00000471887 TMEM74Q96NL1 305 aa8.74□□□□□ -1.01
HDAC9-221ENST00000471887 DISC1Q9NRI5 854 aa8.74□□□□□ -1.01
HDAC9-221ENST00000471887 UNCXA6NJT0 531 aa8.73□□□□□ -1.01
HDAC9-221ENST00000471887 DCDC2CA8MYV0 355 aa8.73□□□□□ -1.01
HDAC9-221ENST00000471887 F6X3S4 739 aa8.73□□□□□ -1.01
HDAC9-221ENST00000471887 ADAM23O75077 832 aa8.73□□□□□ -1.01
HDAC9-221ENST00000471887 NFICP08651 508 aa8.73□□□□□ -1.01
HDAC9-221ENST00000471887 FSTP19883 344 aa8.73□□□□□ -1.01
HDAC9-221ENST00000471887 TTLL4Q14679 1199 aa8.73□□□□□ -1.01
HDAC9-221ENST00000471887 NFKBIBQ15653 356 aa8.73□□□□□ -1.01
HDAC9-221ENST00000471887 PAOXQ6QHF9 649 aa8.73□□□□□ -1.01
HDAC9-221ENST00000471887 ERMP1Q7Z2K6 904 aa8.73□□□□□ -1.01
HDAC9-221ENST00000471887 SLC51AQ86UW1 340 aa8.73□□□□□ -1.01
HDAC9-221ENST00000471887 SEMA6CQ9H3T2 930 aa8.73□□□□□ -1.01
HDAC9-221ENST00000471887 PICK1Q9NRD5 415 aa8.73□□□□□ -1.01
HDAC9-221ENST00000471887 METTL5Q9NRN9 209 aaKnown RBP8.73□□□□□ -1.01
HDAC9-221ENST00000471887 GGT7Q9UJ14 662 aa8.73□□□□□ -1.01
HDAC9-221ENST00000471887 ZNF76P36508 570 aa8.72□□□□□ -1.01
HDAC9-221ENST00000471887 LMNB2Q03252 620 aa8.72□□□□□ -1.01
HDAC9-221ENST00000471887 CAMK2GQ13555 558 aaPredicted RBP8.72□□□□□ -1.01
HDAC9-221ENST00000471887 PRSS36Q5K4E3 855 aa8.72□□□□□ -1.01
HDAC9-221ENST00000471887 RNF43Q68DV7 783 aa8.72□□□□□ -1.01
HDAC9-221ENST00000471887 HDXQ7Z353 690 aa8.72□□□□□ -1.01
HDAC9-221ENST00000471887 RNF214Q8ND24 703 aa8.72□□□□□ -1.01
HDAC9-221ENST00000471887 RHOVQ96L33 236 aa8.72□□□□□ -1.01
HDAC9-221ENST00000471887 KBTBD4Q9NVX7 518 aa8.72□□□□□ -1.01
HDAC9-221ENST00000471887 DAGLAQ9Y4D2 1042 aa8.72□□□□□ -1.01
HDAC9-221ENST00000471887 CSADQ9Y600 493 aa8.72□□□□□ -1.01
HDAC9-221ENST00000471887 SNCAIPQ9Y6H5 919 aa8.72□□□□□ -1.01
HDAC9-221ENST00000471887 RNGTTO60942 597 aaKnown RBP8.71□□□□□ -1.02
HDAC9-221ENST00000471887 IGLV1-40P01703 118 aa8.71□□□□□ -1.02
HDAC9-221ENST00000471887 PF4P02776 101 aa8.71□□□□□ -1.02
HDAC9-221ENST00000471887 HCLS1P14317 486 aaPredicted RBP8.71□□□□□ -1.02
HDAC9-221ENST00000471887 NFIAQ12857 509 aa8.71□□□□□ -1.02
HDAC9-221ENST00000471887 INPP5AQ14642 412 aa8.71□□□□□ -1.02
HDAC9-221ENST00000471887 LRFN4Q6PJG9 635 aa8.71□□□□□ -1.02
HDAC9-221ENST00000471887 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.71□□□□□ -1.02
HDAC9-221ENST00000471887 CCDC84Q86UT8 332 aaPredicted RBP8.71□□□□□ -1.02
HDAC9-221ENST00000471887 C12orf40Q86WS4 652 aa8.71□□□□□ -1.02
HDAC9-221ENST00000471887 SMYD4Q8IYR2 804 aaPredicted RBP8.71□□□□□ -1.02
HDAC9-221ENST00000471887 JARID2Q92833 1246 aaPredicted RBP8.71□□□□□ -1.02
HDAC9-221ENST00000471887 KIAA1522Q9P206 1035 aaPredicted RBP8.71□□□□□ -1.02
HDAC9-221ENST00000471887 MINDY4BA8MYZ0 360 aa8.7□□□□□ -1.02
HDAC9-221ENST00000471887 FANCCQ00597 558 aa8.7□□□□□ -1.02
HDAC9-221ENST00000471887 PPM1JQ5JR12 505 aa8.7□□□□□ -1.02
HDAC9-221ENST00000471887 WIPI1Q5MNZ9 446 aaPredicted RBP8.7□□□□□ -1.02
HDAC9-221ENST00000471887 PLPPR2Q96GM1 343 aa8.7□□□□□ -1.02
HDAC9-221ENST00000471887 COPRSQ9NQ92 184 aa8.7□□□□□ -1.02
HDAC9-221ENST00000471887 SCAMP3O14828 347 aaKnown RBP8.69□□□□□ -1.02
HDAC9-221ENST00000471887 FANCGO15287 622 aa8.69□□□□□ -1.02
HDAC9-221ENST00000471887 RPL6Q02878 288 aaKnown RBP8.69□□□□□ -1.02
HDAC9-221ENST00000471887 RING1Q06587 406 aa8.69□□□□□ -1.02
HDAC9-221ENST00000471887 SNAP47Q5SQN1 464 aa8.69□□□□□ -1.02
HDAC9-221ENST00000471887 RNF34Q969K3 372 aa8.69□□□□□ -1.02
HDAC9-221ENST00000471887 DBNDD2Q9BQY9 259 aa8.69□□□□□ -1.02
HDAC9-221ENST00000471887 SSU72Q9NP77 194 aaKnown RBP8.69□□□□□ -1.02
HDAC9-221ENST00000471887 PRAMEF27A3QJZ7 478 aa8.68□□□□□ -1.02
HDAC9-221ENST00000471887 NEFMP07197 916 aa8.68□□□□□ -1.02
HDAC9-221ENST00000471887 ITGB7P26010 798 aa8.68□□□□□ -1.02
HDAC9-221ENST00000471887 FAM160A1Q05DH4 1040 aa8.68□□□□□ -1.02
HDAC9-221ENST00000471887 CYFIP1Q7L576 1253 aa8.68□□□□□ -1.02
HDAC9-221ENST00000471887 ISL2Q96A47 359 aa8.68□□□□□ -1.02
HDAC9-221ENST00000471887 PCOLCE2Q9UKZ9 415 aa8.68□□□□□ -1.02
HDAC9-221ENST00000471887 BPNT1O95861 308 aa8.67□□□□□ -1.02
HDAC9-221ENST00000471887 ZBTB37Q5TC79 503 aa8.67□□□□□ -1.02
HDAC9-221ENST00000471887 BNC2Q6ZN30 1099 aaPredicted RBP8.67□□□□□ -1.02
HDAC9-221ENST00000471887 GOLM1Q8NBJ4 401 aa8.67□□□□□ -1.02
HDAC9-221ENST00000471887 GIMAP7Q8NHV1 300 aa8.67□□□□□ -1.02
HDAC9-221ENST00000471887 GATAD2BQ8WXI9 593 aa8.67□□□□□ -1.02
HDAC9-221ENST00000471887 MFSD14AQ96MC6 490 aa8.67□□□□□ -1.02
HDAC9-221ENST00000471887 TBC1D32Q96NH3 1257 aa8.67□□□□□ -1.02
HDAC9-221ENST00000471887 LGR6Q9HBX8 967 aa8.67□□□□□ -1.02
HDAC9-221ENST00000471887 PRKAG2Q9UGJ0 569 aa8.67□□□□□ -1.02
HDAC9-221ENST00000471887 GFRA2O00451 464 aa8.66□□□□□ -1.02
HDAC9-221ENST00000471887 NTF4P34130 210 aa8.66□□□□□ -1.02
HDAC9-221ENST00000471887 EIF4A3P38919 411 aaKnown RBP8.66□□□□□ -1.02
HDAC9-221ENST00000471887 CDK8P49336 464 aa8.66□□□□□ -1.02
HDAC9-221ENST00000471887 SEZ6L2Q6UXD5 910 aa8.66□□□□□ -1.02
HDAC9-221ENST00000471887 CDC37L1Q7L3B6 337 aa8.66□□□□□ -1.02
HDAC9-221ENST00000471887 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.66□□□□□ -1.02
HDAC9-221ENST00000471887 KCT2Q8NC54 265 aa8.66□□□□□ -1.02
HDAC9-221ENST00000471887 ZNF507Q8TCN5 953 aa8.66□□□□□ -1.02
HDAC9-221ENST00000471887 ZNF428Q96B54 188 aa8.66□□□□□ -1.02
HDAC9-221ENST00000471887 TACC3Q9Y6A5 838 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms