RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 PPATQ06203 517 aa14.16□□□□□ -0.14
COL4A3-205ENST00000471862 TTC39AQ5SRH9 613 aa14.16□□□□□ -0.14
COL4A3-205ENST00000471862 FAM43AQ8N2R8 423 aa14.16□□□□□ -0.14
COL4A3-205ENST00000471862 EAF2Q96CJ1 260 aaPredicted RBP14.16□□□□□ -0.14
COL4A3-205ENST00000471862 TLR7Q9NYK1 1049 aaKnown RBP14.16□□□□□ -0.14
COL4A3-205ENST00000471862 HPS5Q9UPZ3 1129 aa14.16□□□□□ -0.14
COL4A3-205ENST00000471862 COL2A1P02458 1487 aaPredicted RBP14.16□□□□□ -0.14
COL4A3-205ENST00000471862 FOCADQ5VW36 1801 aa14.15□□□□□ -0.14
COL4A3-205ENST00000471862 PHIPQ8WWQ0 1821 aa14.15□□□□□ -0.14
COL4A3-205ENST00000471862 DOCK1Q14185 1865 aa14.15□□□□□ -0.14
COL4A3-205ENST00000471862 PHF20L1A8MW92 1017 aa14.15□□□□□ -0.14
COL4A3-205ENST00000471862 MAP4K4O95819 1239 aaPredicted RBP14.15□□□□□ -0.14
COL4A3-205ENST00000471862 CYP2E1P05181 493 aaPredicted RBP14.15□□□□□ -0.14
COL4A3-205ENST00000471862 LDHCP07864 332 aa14.15□□□□□ -0.14
COL4A3-205ENST00000471862 GSTO1P78417 241 aa14.15□□□□□ -0.14
COL4A3-205ENST00000471862 CCDC158Q5M9N0 1113 aa14.15□□□□□ -0.14
COL4A3-205ENST00000471862 FBXO46Q6PJ61 603 aaPredicted RBP14.15□□□□□ -0.14
COL4A3-205ENST00000471862 ZCCHC17Q9NP64 241 aaKnown RBP14.15□□□□□ -0.14
COL4A3-205ENST00000471862 SNRKQ9NRH2 765 aa14.15□□□□□ -0.14
COL4A3-205ENST00000471862 RAI14Q9P0K7 980 aa14.15□□□□□ -0.14
COL4A3-205ENST00000471862 RCAN3Q9UKA8 241 aa14.15□□□□□ -0.14
COL4A3-205ENST00000471862 KCNH4Q9UQ05 1017 aa14.15□□□□□ -0.14
COL4A3-205ENST00000471862 PTPRFP10586 1907 aa14.15□□□□□ -0.14
COL4A3-205ENST00000471862 HTTP42858 3142 aa14.15□□□□□ -0.14
COL4A3-205ENST00000471862 SIPA1L1O43166 1804 aa14.14□□□□□ -0.15
COL4A3-205ENST00000471862 BTBD19C9JJ37 291 aa14.14□□□□□ -0.15
COL4A3-205ENST00000471862 IGSF3O75054 1194 aa14.14□□□□□ -0.15
COL4A3-205ENST00000471862 CETPP11597 493 aa14.14□□□□□ -0.15
COL4A3-205ENST00000471862 ZAP70P43403 619 aa14.14□□□□□ -0.15
COL4A3-205ENST00000471862 CAP1Q01518 475 aa14.14□□□□□ -0.15
COL4A3-205ENST00000471862 SNAPC2Q13487 334 aa14.14□□□□□ -0.15
COL4A3-205ENST00000471862 TAF1CQ15572 869 aaPredicted RBP14.14□□□□□ -0.15
COL4A3-205ENST00000471862 CCDC8Q9H0W5 538 aaPredicted RBP14.14□□□□□ -0.15
COL4A3-205ENST00000471862 ZBTB40Q9NUA8 1239 aa14.14□□□□□ -0.15
COL4A3-205ENST00000471862 DDX19BQ9UMR2 479 aa14.14□□□□□ -0.15
COL4A3-205ENST00000471862 EXOC6BQ9Y2D4 811 aa14.14□□□□□ -0.15
COL4A3-205ENST00000471862 COG6Q9Y2V7 657 aa14.14□□□□□ -0.15
COL4A3-205ENST00000471862 SLURP2P0DP57 97 aa14.13□□□□□ -0.15
COL4A3-205ENST00000471862 PICALMQ13492 652 aa14.13□□□□□ -0.15
COL4A3-205ENST00000471862 MOGSQ13724 837 aa14.13□□□□□ -0.15
COL4A3-205ENST00000471862 OTOP1Q7RTM1 612 aa14.13□□□□□ -0.15
COL4A3-205ENST00000471862 ERC1Q8IUD2 1116 aa14.13□□□□□ -0.15
COL4A3-205ENST00000471862 SIRT2Q8IXJ6 389 aa14.13□□□□□ -0.15
COL4A3-205ENST00000471862 ERO1AQ96HE7 468 aa14.13□□□□□ -0.15
COL4A3-205ENST00000471862 LRP2BPQ9P2M1 347 aa14.13□□□□□ -0.15
COL4A3-205ENST00000471862 TBC1D12O60347 775 aa14.12□□□□□ -0.15
COL4A3-205ENST00000471862 PPP4CP60510 307 aa14.12□□□□□ -0.15
COL4A3-205ENST00000471862 SP3Q02447 781 aa14.12□□□□□ -0.15
COL4A3-205ENST00000471862 ZSCAN29Q8IWY8 852 aaPredicted RBP14.12□□□□□ -0.15
COL4A3-205ENST00000471862 RPAP2Q8IXW5 612 aaPredicted RBP14.12□□□□□ -0.15
COL4A3-205ENST00000471862 SCYL3Q8IZE3 742 aa14.12□□□□□ -0.15
COL4A3-205ENST00000471862 CD99L2Q8TCZ2 262 aa14.12□□□□□ -0.15
COL4A3-205ENST00000471862 OSBPL5Q9H0X9 879 aaPredicted RBP14.12□□□□□ -0.15
COL4A3-205ENST00000471862 ZFYVE28Q9HCC9 887 aa14.12□□□□□ -0.15
COL4A3-205ENST00000471862 PIH1D3Q9NQM4 214 aaKnown RBP14.12□□□□□ -0.15
COL4A3-205ENST00000471862 ZSWIM8A7E2V4 1837 aa14.11□□□□□ -0.15
COL4A3-205ENST00000471862 ATAD5Q96QE3 1844 aa14.11□□□□□ -0.15
COL4A3-205ENST00000471862 HSP90AB4PQ58FF6 505 aa14.11□□□□□ -0.15
COL4A3-205ENST00000471862 NAA16Q6N069 864 aaPredicted RBP14.11□□□□□ -0.15
COL4A3-205ENST00000471862 ADGRA1Q86SQ6 560 aa14.11□□□□□ -0.15
COL4A3-205ENST00000471862 TEX11Q8IYF3 940 aa14.11□□□□□ -0.15
COL4A3-205ENST00000471862 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.11□□□□□ -0.15
COL4A3-205ENST00000471862 RHPN1Q8TCX5 695 aa14.11□□□□□ -0.15
COL4A3-205ENST00000471862 TRIM17Q9Y577 477 aa14.11□□□□□ -0.15
COL4A3-205ENST00000471862 CXCL11O14625 94 aa14.1□□□□□ -0.15
COL4A3-205ENST00000471862 TLR2O60603 784 aa14.1□□□□□ -0.15
COL4A3-205ENST00000471862 PTPRAP18433 802 aa14.1□□□□□ -0.15
COL4A3-205ENST00000471862 PDE3AQ14432 1141 aa14.1□□□□□ -0.15
COL4A3-205ENST00000471862 C20orf194Q5TEA3 1177 aa14.1□□□□□ -0.15
COL4A3-205ENST00000471862 ANKRD23Q86SG2 305 aa14.1□□□□□ -0.15
COL4A3-205ENST00000471862 SH3RF3Q8TEJ3 882 aaPredicted RBP14.1□□□□□ -0.15
COL4A3-205ENST00000471862 CTNND1O60716 968 aaKnown RBP14.09□□□□□ -0.15
COL4A3-205ENST00000471862 SOX10P56693 466 aa14.09□□□□□ -0.15
COL4A3-205ENST00000471862 MLLT1Q03111 559 aaPredicted RBP14.09□□□□□ -0.15
COL4A3-205ENST00000471862 AACSQ86V21 672 aa14.09□□□□□ -0.15
COL4A3-205ENST00000471862 EFCC1Q9HA90 598 aa14.09□□□□□ -0.15
COL4A3-205ENST00000471862 IL1RAPL2Q9NP60 686 aa14.09□□□□□ -0.15
COL4A3-205ENST00000471862 AATFQ9NY61 560 aaKnown RBP eCLIP14.09□□□□□ -0.15
COL4A3-205ENST00000471862 AFG3L2Q9Y4W6 797 aa14.09□□□□□ -0.15
COL4A3-205ENST00000471862 ADGRA2Q96PE1 1338 aa14.09□□□□□ -0.15
COL4A3-205ENST00000471862 A0A0G2JLL6 359 aaPredicted RBP14.08□□□□□ -0.16
COL4A3-205ENST00000471862 FAM196BA6NMK8 535 aa14.08□□□□□ -0.16
COL4A3-205ENST00000471862 HMMRO75330 724 aa14.08□□□□□ -0.16
COL4A3-205ENST00000471862 BAG3O95817 575 aa14.08□□□□□ -0.16
COL4A3-205ENST00000471862 PLCG2P16885 1265 aa14.08□□□□□ -0.16
COL4A3-205ENST00000471862 GPAT2Q6NUI2 795 aa14.08□□□□□ -0.16
COL4A3-205ENST00000471862 C17orf99Q6UX52 265 aa14.08□□□□□ -0.16
COL4A3-205ENST00000471862 PRRT2Q7Z6L0 340 aaPredicted RBP14.08□□□□□ -0.16
COL4A3-205ENST00000471862 KIF1BPQ96EK5 621 aa14.08□□□□□ -0.16
COL4A3-205ENST00000471862 NOL10Q9BSC4 688 aaKnown RBP14.08□□□□□ -0.16
COL4A3-205ENST00000471862 CHMP4BQ9H444 224 aaKnown RBP14.08□□□□□ -0.16
COL4A3-205ENST00000471862 ANTXR1Q9H6X2 564 aa14.08□□□□□ -0.16
COL4A3-205ENST00000471862 PTPN22Q9Y2R2 807 aa14.08□□□□□ -0.16
COL4A3-205ENST00000471862 NDUFB9Q9Y6M9 179 aa14.08□□□□□ -0.16
COL4A3-205ENST00000471862 MYH1P12882 1939 aa14.07□□□□□ -0.16
COL4A3-205ENST00000471862 LOC285556D6RIA3 1793 aa14.07□□□□□ -0.16
COL4A3-205ENST00000471862 RBBP6Q7Z6E9 1792 aaKnown RBP14.07□□□□□ -0.16
COL4A3-205ENST00000471862 PDHXO00330 501 aa14.07□□□□□ -0.16
COL4A3-205ENST00000471862 RRP1BQ14684 758 aaKnown RBP14.07□□□□□ -0.16
COL4A3-205ENST00000471862 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms