RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 ATRNL1Q5VV63 1379 aa18.38■□□□□ 0.53
VPS8-221ENST00000471655 IRF6O14896 467 aa18.37■□□□□ 0.53
VPS8-221ENST00000471655 SNAPC2Q13487 334 aa18.37■□□□□ 0.53
VPS8-221ENST00000471655 FBXO46Q6PJ61 603 aaPredicted RBP18.37■□□□□ 0.53
VPS8-221ENST00000471655 SH3BP5LQ7L8J4 393 aa18.37■□□□□ 0.53
VPS8-221ENST00000471655 ERC1Q8IUD2 1116 aa18.37■□□□□ 0.53
VPS8-221ENST00000471655 RPAP2Q8IXW5 612 aaPredicted RBP18.37■□□□□ 0.53
VPS8-221ENST00000471655 CHMP4BQ9H444 224 aaKnown RBP18.37■□□□□ 0.53
VPS8-221ENST00000471655 DDX4Q9NQI0 724 aaKnown RBP18.37■□□□□ 0.53
VPS8-221ENST00000471655 RAI14Q9P0K7 980 aa18.37■□□□□ 0.53
VPS8-221ENST00000471655 LRP2BPQ9P2M1 347 aa18.37■□□□□ 0.53
VPS8-221ENST00000471655 AK9Q5TCS8 1911 aa18.37■□□□□ 0.53
VPS8-221ENST00000471655 PHF20L1A8MW92 1017 aa18.36■□□□□ 0.53
VPS8-221ENST00000471655 HSP90AB4PQ58FF6 505 aa18.36■□□□□ 0.53
VPS8-221ENST00000471655 EAF2Q96CJ1 260 aaPredicted RBP18.36■□□□□ 0.53
VPS8-221ENST00000471655 ERO1AQ96HE7 468 aa18.36■□□□□ 0.53
VPS8-221ENST00000471655 ZBTB40Q9NUA8 1239 aa18.36■□□□□ 0.53
VPS8-221ENST00000471655 DBNLQ9UJU6 430 aaKnown RBP18.36■□□□□ 0.53
VPS8-221ENST00000471655 HPS5Q9UPZ3 1129 aa18.36■□□□□ 0.53
VPS8-221ENST00000471655 KCNH4Q9UQ05 1017 aa18.36■□□□□ 0.53
VPS8-221ENST00000471655 DDTLA6NHG4 134 aaPredicted RBP18.35■□□□□ 0.53
VPS8-221ENST00000471655 CYP2E1P05181 493 aaPredicted RBP18.35■□□□□ 0.53
VPS8-221ENST00000471655 ZSCAN29Q8IWY8 852 aaPredicted RBP18.35■□□□□ 0.53
VPS8-221ENST00000471655 FAM43AQ8N2R8 423 aa18.35■□□□□ 0.53
VPS8-221ENST00000471655 ZFYVE28Q9HCC9 887 aa18.35■□□□□ 0.53
VPS8-221ENST00000471655 DOCK2Q92608 1830 aa18.35■□□□□ 0.53
VPS8-221ENST00000471655 COL2A1P02458 1487 aaPredicted RBP18.34■□□□□ 0.53
VPS8-221ENST00000471655 TBC1D12O60347 775 aa18.34■□□□□ 0.53
VPS8-221ENST00000471655 SP3Q02447 781 aa18.34■□□□□ 0.53
VPS8-221ENST00000471655 TAF1CQ15572 869 aaPredicted RBP18.34■□□□□ 0.53
VPS8-221ENST00000471655 CCDC8Q9H0W5 538 aaPredicted RBP18.34■□□□□ 0.53
VPS8-221ENST00000471655 SNRKQ9NRH2 765 aa18.34■□□□□ 0.53
VPS8-221ENST00000471655 BTBD19C9JJ37 291 aa18.33■□□□□ 0.52
VPS8-221ENST00000471655 PPP4CP60510 307 aa18.33■□□□□ 0.52
VPS8-221ENST00000471655 PICALMQ13492 652 aa18.33■□□□□ 0.52
VPS8-221ENST00000471655 NAA16Q6N069 864 aaPredicted RBP18.33■□□□□ 0.52
VPS8-221ENST00000471655 SCYL3Q8IZE3 742 aa18.33■□□□□ 0.52
VPS8-221ENST00000471655 TLR7Q9NYK1 1049 aaKnown RBP18.33■□□□□ 0.52
VPS8-221ENST00000471655 EXOC6BQ9Y2D4 811 aa18.33■□□□□ 0.52
VPS8-221ENST00000471655 COG6Q9Y2V7 657 aa18.33■□□□□ 0.52
VPS8-221ENST00000471655 CXCL11O14625 94 aa18.32■□□□□ 0.52
VPS8-221ENST00000471655 CTNND1O60716 968 aaKnown RBP18.32■□□□□ 0.52
VPS8-221ENST00000471655 HMMRO75330 724 aa18.32■□□□□ 0.52
VPS8-221ENST00000471655 BAG3O95817 575 aa18.32■□□□□ 0.52
VPS8-221ENST00000471655 PLCG2P16885 1265 aa18.32■□□□□ 0.52
VPS8-221ENST00000471655 ZAP70P43403 619 aa18.32■□□□□ 0.52
VPS8-221ENST00000471655 MLLT1Q03111 559 aaPredicted RBP18.32■□□□□ 0.52
VPS8-221ENST00000471655 PDE3AQ14432 1141 aa18.32■□□□□ 0.52
VPS8-221ENST00000471655 TMED8Q6PL24 325 aaPredicted RBP18.32■□□□□ 0.52
VPS8-221ENST00000471655 OTOP1Q7RTM1 612 aa18.32■□□□□ 0.52
VPS8-221ENST00000471655 ANKRD23Q86SG2 305 aa18.32■□□□□ 0.52
VPS8-221ENST00000471655 NOL10Q9BSC4 688 aaKnown RBP18.32■□□□□ 0.52
VPS8-221ENST00000471655 TLR2O60603 784 aa18.31■□□□□ 0.52
VPS8-221ENST00000471655 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.31■□□□□ 0.52
VPS8-221ENST00000471655 RHPN1Q8TCX5 695 aa18.31■□□□□ 0.52
VPS8-221ENST00000471655 CD99L2Q8TCZ2 262 aa18.31■□□□□ 0.52
VPS8-221ENST00000471655 OSBPL5Q9H0X9 879 aaPredicted RBP18.31■□□□□ 0.52
VPS8-221ENST00000471655 TRIM17Q9Y577 477 aa18.31■□□□□ 0.52
VPS8-221ENST00000471655 MAST2Q6P0Q8 1798 aa18.31■□□□□ 0.52
VPS8-221ENST00000471655 PTPRAP18433 802 aa18.3■□□□□ 0.52
VPS8-221ENST00000471655 MOGSQ13724 837 aa18.3■□□□□ 0.52
VPS8-221ENST00000471655 ARHGEF6Q15052 776 aa18.3■□□□□ 0.52
VPS8-221ENST00000471655 SIRT2Q8IXJ6 389 aa18.3■□□□□ 0.52
VPS8-221ENST00000471655 TEX11Q8IYF3 940 aa18.3■□□□□ 0.52
VPS8-221ENST00000471655 PIH1D3Q9NQM4 214 aaKnown RBP18.3■□□□□ 0.52
VPS8-221ENST00000471655 PICK1Q9NRD5 415 aa18.3■□□□□ 0.52
VPS8-221ENST00000471655 AACSQ86V21 672 aa18.29■□□□□ 0.52
VPS8-221ENST00000471655 SH3RF3Q8TEJ3 882 aaPredicted RBP18.29■□□□□ 0.52
VPS8-221ENST00000471655 KIF1BPQ96EK5 621 aa18.29■□□□□ 0.52
VPS8-221ENST00000471655 DHX36Q9H2U1 1008 aaKnown RBP18.29■□□□□ 0.52
VPS8-221ENST00000471655 EFCC1Q9HA90 598 aa18.29■□□□□ 0.52
VPS8-221ENST00000471655 PTPN22Q9Y2R2 807 aa18.29■□□□□ 0.52
VPS8-221ENST00000471655 AFG3L2Q9Y4W6 797 aa18.29■□□□□ 0.52
VPS8-221ENST00000471655 RAB11FIP3O75154 756 aa18.28■□□□□ 0.52
VPS8-221ENST00000471655 ADGRA1Q86SQ6 560 aa18.28■□□□□ 0.52
VPS8-221ENST00000471655 CERS3Q8IU89 383 aa18.28■□□□□ 0.52
VPS8-221ENST00000471655 CLASRPQ8N2M8 674 aaKnown RBP18.28■□□□□ 0.52
VPS8-221ENST00000471655 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.28■□□□□ 0.52
VPS8-221ENST00000471655 AATFQ9NY61 560 aaKnown RBP eCLIP18.28■□□□□ 0.52
VPS8-221ENST00000471655 ZHX2Q9Y6X8 837 aa18.28■□□□□ 0.52
VPS8-221ENST00000471655 A0A0G2JLL6 359 aaPredicted RBP18.27■□□□□ 0.52
VPS8-221ENST00000471655 PDHXO00330 501 aa18.27■□□□□ 0.52
VPS8-221ENST00000471655 FASTKD5Q7L8L6 764 aaKnown RBP18.27■□□□□ 0.52
VPS8-221ENST00000471655 PRRT2Q7Z6L0 340 aaPredicted RBP18.27■□□□□ 0.52
VPS8-221ENST00000471655 IL1RAPL2Q9NP60 686 aa18.27■□□□□ 0.52
VPS8-221ENST00000471655 PI4KBQ9UBF8 816 aa18.27■□□□□ 0.52
VPS8-221ENST00000471655 HERC5Q9UII4 1024 aaKnown RBP18.27■□□□□ 0.52
VPS8-221ENST00000471655 SLURP2P0DP57 97 aa18.26■□□□□ 0.51
VPS8-221ENST00000471655 SOX10P56693 466 aa18.26■□□□□ 0.51
VPS8-221ENST00000471655 CAP1Q01518 475 aa18.26■□□□□ 0.51
VPS8-221ENST00000471655 GPAT2Q6NUI2 795 aa18.26■□□□□ 0.51
VPS8-221ENST00000471655 C17orf99Q6UX52 265 aa18.26■□□□□ 0.51
VPS8-221ENST00000471655 METTL16Q86W50 562 aaKnown RBP18.26■□□□□ 0.51
VPS8-221ENST00000471655 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.26■□□□□ 0.51
VPS8-221ENST00000471655 TBC1D2Q9BYX2 928 aa18.26■□□□□ 0.51
VPS8-221ENST00000471655 DOCK1Q14185 1865 aa18.26■□□□□ 0.51
VPS8-221ENST00000471655 MYO5AQ9Y4I1 1855 aaKnown RBP18.26■□□□□ 0.51
VPS8-221ENST00000471655 ADGRA2Q96PE1 1338 aa18.25■□□□□ 0.51
VPS8-221ENST00000471655 IDH1O75874 414 aaKnown RBP18.25■□□□□ 0.51
VPS8-221ENST00000471655 GNRH1P01148 92 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms