RNA–Protein interactions for RNA: ENST00000471471.1

GTF2B-205, Transcript of general transcription factor IIB, humanhuman

TSL 3

Gene GTF2B, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-205ENST00000471471 GREM2Q9H772 168 aa8.4□□□□□ -1.06
GTF2B-205ENST00000471471 TDRD3Q9H7E2 651 aaKnown RBP8.4□□□□□ -1.06
GTF2B-205ENST00000471471 PCDHGA4Q9Y5G9 962 aa8.4□□□□□ -1.06
GTF2B-205ENST00000471471 STK24Q9Y6E0 443 aa8.4□□□□□ -1.06
GTF2B-205ENST00000471471 TCP10L2B9ZVM9 353 aa8.39□□□□□ -1.07
GTF2B-205ENST00000471471 SNAP23O00161 211 aa8.39□□□□□ -1.07
GTF2B-205ENST00000471471 CYP2C8P10632 490 aa8.39□□□□□ -1.07
GTF2B-205ENST00000471471 FOSL2P15408 326 aa8.39□□□□□ -1.07
GTF2B-205ENST00000471471 CTSWP56202 376 aa8.39□□□□□ -1.07
GTF2B-205ENST00000471471 FKBP1AP62942 108 aaKnown RBP8.39□□□□□ -1.07
GTF2B-205ENST00000471471 PPATQ06203 517 aa8.39□□□□□ -1.07
GTF2B-205ENST00000471471 GPAT2Q6NUI2 795 aa8.39□□□□□ -1.07
GTF2B-205ENST00000471471 TTLL11Q8NHH1 800 aa8.39□□□□□ -1.07
GTF2B-205ENST00000471471 WRNIP1Q96S55 665 aa8.39□□□□□ -1.07
GTF2B-205ENST00000471471 BABAM1Q9NWV8 329 aa8.39□□□□□ -1.07
GTF2B-205ENST00000471471 LHX6Q9UPM6 363 aa8.39□□□□□ -1.07
GTF2B-205ENST00000471471 KCNH4Q9UQ05 1017 aa8.39□□□□□ -1.07
GTF2B-205ENST00000471471 ARIH1Q9Y4X5 557 aaPredicted RBP8.39□□□□□ -1.07
GTF2B-205ENST00000471471 COL6A1P12109 1028 aa8.38□□□□□ -1.07
GTF2B-205ENST00000471471 IL1R1P14778 569 aa8.38□□□□□ -1.07
GTF2B-205ENST00000471471 RBM5P52756 815 aaKnown RBP eCLIP8.38□□□□□ -1.07
GTF2B-205ENST00000471471 LRRC26Q2I0M4 334 aa8.38□□□□□ -1.07
GTF2B-205ENST00000471471 CCDC191Q8NCU4 936 aa8.38□□□□□ -1.07
GTF2B-205ENST00000471471 OGDHLQ9ULD0 1010 aa8.38□□□□□ -1.07
GTF2B-205ENST00000471471 JAG2Q9Y219 1238 aa8.38□□□□□ -1.07
GTF2B-205ENST00000471471 REV3LO60673 3130 aa8.38□□□□□ -1.07
GTF2B-205ENST00000471471 DOCK3Q8IZD9 2030 aa8.37□□□□□ -1.07
GTF2B-205ENST00000471471 TRIM32Q13049 653 aa8.37□□□□□ -1.07
GTF2B-205ENST00000471471 HDGFL1Q5TGJ6 251 aa8.37□□□□□ -1.07
GTF2B-205ENST00000471471 C15orf52Q6ZUT6 534 aaKnown RBP8.37□□□□□ -1.07
GTF2B-205ENST00000471471 DZIP1LQ8IYY4 767 aaKnown RBP8.37□□□□□ -1.07
GTF2B-205ENST00000471471 PARK7Q99497 189 aaKnown RBP8.37□□□□□ -1.07
GTF2B-205ENST00000471471 MYD88Q99836 296 aa8.37□□□□□ -1.07
GTF2B-205ENST00000471471 HCSTQ9UBK5 93 aa8.37□□□□□ -1.07
GTF2B-205ENST00000471471 DBF4Q9UBU7 674 aaPredicted RBP8.37□□□□□ -1.07
GTF2B-205ENST00000471471 SERPINA10Q9UK55 444 aa8.37□□□□□ -1.07
GTF2B-205ENST00000471471 CHD9Q3L8U1 2897 aa8.37□□□□□ -1.07
GTF2B-205ENST00000471471 TNPO2O14787 897 aaKnown RBP8.36□□□□□ -1.07
GTF2B-205ENST00000471471 INPP5BP32019 993 aa8.36□□□□□ -1.07
GTF2B-205ENST00000471471 RIC3Q7Z5B4 369 aa8.36□□□□□ -1.07
GTF2B-205ENST00000471471 ANKRD2Q9GZV1 360 aa8.36□□□□□ -1.07
GTF2B-205ENST00000471471 HYPKQ9NX55 129 aa8.36□□□□□ -1.07
GTF2B-205ENST00000471471 CWC25Q9NXE8 425 aaPredicted RBP8.36□□□□□ -1.07
GTF2B-205ENST00000471471 CACNA1AO00555 2505 aa8.36□□□□□ -1.07
GTF2B-205ENST00000471471 MUC6Q6W4X9 2439 aa8.35□□□□□ -1.07
GTF2B-205ENST00000471471 STK25O00506 426 aa8.35□□□□□ -1.07
GTF2B-205ENST00000471471 HMGCRP04035 888 aa8.35□□□□□ -1.07
GTF2B-205ENST00000471471 TNNI2P48788 182 aa8.35□□□□□ -1.07
GTF2B-205ENST00000471471 CACNB3P54284 484 aa8.35□□□□□ -1.07
GTF2B-205ENST00000471471 SMAD3P84022 425 aaKnown RBP8.35□□□□□ -1.07
GTF2B-205ENST00000471471 CHRNDQ07001 517 aa8.35□□□□□ -1.07
GTF2B-205ENST00000471471 SHHQ15465 462 aa8.35□□□□□ -1.07
GTF2B-205ENST00000471471 C9orf50Q5SZB4 431 aa8.35□□□□□ -1.07
GTF2B-205ENST00000471471 ADAMTS19Q8TE59 1207 aa8.35□□□□□ -1.07
GTF2B-205ENST00000471471 HMX1Q9NP08 348 aaPredicted RBP8.35□□□□□ -1.07
GTF2B-205ENST00000471471 CHL1O00533 1208 aa8.34□□□□□ -1.07
GTF2B-205ENST00000471471 ARHGAP33O14559 1287 aa8.34□□□□□ -1.07
GTF2B-205ENST00000471471 NEFMP07197 916 aa8.34□□□□□ -1.07
GTF2B-205ENST00000471471 HOXB7P09629 217 aa8.34□□□□□ -1.07
GTF2B-205ENST00000471471 IGHMBP2P38935 993 aaKnown RBP8.34□□□□□ -1.07
GTF2B-205ENST00000471471 MAP3K21Q5TCX8 1036 aa8.34□□□□□ -1.07
GTF2B-205ENST00000471471 ADGRD1Q6QNK2 874 aa8.34□□□□□ -1.07
GTF2B-205ENST00000471471 TMC2Q8TDI7 906 aa8.34□□□□□ -1.07
GTF2B-205ENST00000471471 ATXN2LQ8WWM7 1075 aaKnown RBP8.34□□□□□ -1.07
GTF2B-205ENST00000471471 ASB2Q96Q27 587 aa8.34□□□□□ -1.07
GTF2B-205ENST00000471471 UHRF1Q96T88 793 aaPredicted RBP8.34□□□□□ -1.07
GTF2B-205ENST00000471471 PHAXQ9H814 394 aaKnown RBP8.34□□□□□ -1.07
GTF2B-205ENST00000471471 PLA2G2EQ9NZK7 142 aa8.34□□□□□ -1.07
GTF2B-205ENST00000471471 ZNF112Q9UJU3 913 aa8.34□□□□□ -1.07
GTF2B-205ENST00000471471 GJD2Q9UKL4 321 aa8.34□□□□□ -1.07
GTF2B-205ENST00000471471 TTF2Q9UNY4 1162 aaKnown RBP8.34□□□□□ -1.07
GTF2B-205ENST00000471471 LTBP2Q14767 1821 aa8.33□□□□□ -1.08
GTF2B-205ENST00000471471 MYH3P11055 1940 aa8.33□□□□□ -1.08
GTF2B-205ENST00000471471 TK2O00142 265 aa8.33□□□□□ -1.08
GTF2B-205ENST00000471471 TAF5LO75529 589 aa8.33□□□□□ -1.08
GTF2B-205ENST00000471471 CRKP46108 304 aa8.33□□□□□ -1.08
GTF2B-205ENST00000471471 KCNJ4P48050 445 aa8.33□□□□□ -1.08
GTF2B-205ENST00000471471 GRIN2CQ14957 1233 aa8.33□□□□□ -1.08
GTF2B-205ENST00000471471 RALBP1Q15311 655 aa8.33□□□□□ -1.08
GTF2B-205ENST00000471471 GRIK5Q16478 980 aa8.33□□□□□ -1.08
GTF2B-205ENST00000471471 MFSD14BQ5SR56 506 aa8.33□□□□□ -1.08
GTF2B-205ENST00000471471 MIGA2Q7L4E1 593 aa8.33□□□□□ -1.08
GTF2B-205ENST00000471471 ALYREFQ86V81 257 aaKnown RBP8.33□□□□□ -1.08
GTF2B-205ENST00000471471 LBHD1Q9BQE6 289 aaPredicted RBP8.33□□□□□ -1.08
GTF2B-205ENST00000471471 METTL22Q9BUU2 404 aaPredicted RBP8.33□□□□□ -1.08
GTF2B-205ENST00000471471 C1QTNF1Q9BXJ1 281 aa8.33□□□□□ -1.08
GTF2B-205ENST00000471471 CHD7Q9P2D1 2997 aa8.33□□□□□ -1.08
GTF2B-205ENST00000471471 MAST2Q6P0Q8 1798 aa8.33□□□□□ -1.08
GTF2B-205ENST00000471471 CACNA1FO60840 1977 aa8.32□□□□□ -1.08
GTF2B-205ENST00000471471 A0A0G2JLL6 359 aaPredicted RBP8.32□□□□□ -1.08
GTF2B-205ENST00000471471 CXCL11O14625 94 aa8.32□□□□□ -1.08
GTF2B-205ENST00000471471 IGKV5-2P06315 115 aa8.32□□□□□ -1.08
GTF2B-205ENST00000471471 ITGA6P23229 1130 aa8.32□□□□□ -1.08
GTF2B-205ENST00000471471 RIPK4P57078 832 aa8.32□□□□□ -1.08
GTF2B-205ENST00000471471 NOL9Q5SY16 702 aaKnown RBP8.32□□□□□ -1.08
GTF2B-205ENST00000471471 ZNF804AQ7Z570 1209 aa8.32□□□□□ -1.08
GTF2B-205ENST00000471471 PRRT2Q7Z6L0 340 aaPredicted RBP8.32□□□□□ -1.08
GTF2B-205ENST00000471471 FAM83AQ86UY5 434 aa8.32□□□□□ -1.08
GTF2B-205ENST00000471471 TRIB2Q92519 343 aa8.32□□□□□ -1.08
GTF2B-205ENST00000471471 COA7Q96BR5 231 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms