RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 USP26Q9BXU7 913 aa2.82□□□□□ -1.96
UBXN4-207ENST00000471246 IRF2BPLQ9H1B7 796 aa2.82□□□□□ -1.96
UBXN4-207ENST00000471246 NPHS2Q9NP85 383 aa2.82□□□□□ -1.96
UBXN4-207ENST00000471246 OSGEPQ9NPF4 335 aa2.82□□□□□ -1.96
UBXN4-207ENST00000471246 GNEQ9Y223 722 aaKnown RBP2.82□□□□□ -1.96
UBXN4-207ENST00000471246 SOX1O00570 391 aaPredicted RBP2.81□□□□□ -1.96
UBXN4-207ENST00000471246 CPNE3O75131 537 aaKnown RBP2.81□□□□□ -1.96
UBXN4-207ENST00000471246 NEFLP07196 543 aa2.81□□□□□ -1.96
UBXN4-207ENST00000471246 CELA3BP08861 270 aa2.81□□□□□ -1.96
UBXN4-207ENST00000471246 ESRRAP11474 423 aaPredicted RBP2.81□□□□□ -1.96
UBXN4-207ENST00000471246 GRIA4P48058 902 aa2.81□□□□□ -1.96
UBXN4-207ENST00000471246 ARL4DP49703 201 aa2.81□□□□□ -1.96
UBXN4-207ENST00000471246 LINC00310P59036 64 aa2.81□□□□□ -1.96
UBXN4-207ENST00000471246 CYP27A1Q02318 531 aa2.81□□□□□ -1.96
UBXN4-207ENST00000471246 C19orf57Q0VDD7 668 aa2.81□□□□□ -1.96
UBXN4-207ENST00000471246 CCNJLQ8IV13 435 aa2.81□□□□□ -1.96
UBXN4-207ENST00000471246 C2CD4AQ8NCU7 369 aaPredicted RBP2.81□□□□□ -1.96
UBXN4-207ENST00000471246 CITED4Q96RK1 184 aa2.81□□□□□ -1.96
UBXN4-207ENST00000471246 TCF12Q99081 682 aa2.81□□□□□ -1.96
UBXN4-207ENST00000471246 TMPRSS13Q9BYE2 586 aa2.81□□□□□ -1.96
UBXN4-207ENST00000471246 RBCK1Q9BYM8 510 aa2.81□□□□□ -1.96
UBXN4-207ENST00000471246 NIF3L1Q9GZT8 377 aa2.81□□□□□ -1.96
UBXN4-207ENST00000471246 LIN7BQ9HAP6 207 aa2.81□□□□□ -1.96
UBXN4-207ENST00000471246 PRDM7Q9NQW5 492 aa2.81□□□□□ -1.96
UBXN4-207ENST00000471246 BIN2Q9UBW5 565 aaPredicted RBP2.81□□□□□ -1.96
UBXN4-207ENST00000471246 VAV3Q9UKW4 847 aa2.81□□□□□ -1.96
UBXN4-207ENST00000471246 A0A096LPE4 126 aa2.8□□□□□ -1.96
UBXN4-207ENST00000471246 LOC100289279A0A1B0GTE1 492 aa2.8□□□□□ -1.96
UBXN4-207ENST00000471246 A0A1W2PPZ6 126 aa2.8□□□□□ -1.96
UBXN4-207ENST00000471246 TCAF2A6NFQ2 919 aa2.8□□□□□ -1.96
UBXN4-207ENST00000471246 EIF1AYO14602 144 aaKnown RBP2.8□□□□□ -1.96
UBXN4-207ENST00000471246 GLI1P08151 1106 aa2.8□□□□□ -1.96
UBXN4-207ENST00000471246 PRKCQQ04759 706 aa2.8□□□□□ -1.96
UBXN4-207ENST00000471246 PCDH1Q08174 1060 aa2.8□□□□□ -1.96
UBXN4-207ENST00000471246 SPRED3Q2MJR0 410 aa2.8□□□□□ -1.96
UBXN4-207ENST00000471246 NUTM2GQ5VZR2 741 aa2.8□□□□□ -1.96
UBXN4-207ENST00000471246 SLC23A3Q6PIS1 610 aa2.8□□□□□ -1.96
UBXN4-207ENST00000471246 MPZL3Q6UWV2 235 aa2.8□□□□□ -1.96
UBXN4-207ENST00000471246 TMC7Q7Z402 723 aa2.8□□□□□ -1.96
UBXN4-207ENST00000471246 NETO1Q8TDF5 533 aa2.8□□□□□ -1.96
UBXN4-207ENST00000471246 TMC1Q8TDI8 760 aa2.8□□□□□ -1.96
UBXN4-207ENST00000471246 ALKBH8Q96BT7 664 aaKnown RBP2.8□□□□□ -1.96
UBXN4-207ENST00000471246 DMRTB1Q96MA1 342 aa2.8□□□□□ -1.96
UBXN4-207ENST00000471246 DIRC2Q96SL1 478 aa2.8□□□□□ -1.96
UBXN4-207ENST00000471246 NRSN2Q9GZP1 204 aa2.8□□□□□ -1.96
UBXN4-207ENST00000471246 DNAJC25Q9H1X3 360 aa2.8□□□□□ -1.96
UBXN4-207ENST00000471246 CLEC4MQ9H2X3 399 aaPredicted RBP2.8□□□□□ -1.96
UBXN4-207ENST00000471246 SOX17Q9H6I2 414 aaPredicted RBP2.8□□□□□ -1.96
UBXN4-207ENST00000471246 SUGCTQ9HAC7 445 aa2.8□□□□□ -1.96
UBXN4-207ENST00000471246 ABCB6Q9NP58 842 aa2.8□□□□□ -1.96
UBXN4-207ENST00000471246 DCTN4Q9UJW0 460 aa2.8□□□□□ -1.96
UBXN4-207ENST00000471246 CTNND2Q9UQB3 1225 aa2.8□□□□□ -1.96
UBXN4-207ENST00000471246 IVNS1ABPQ9Y6Y0 642 aa2.8□□□□□ -1.96
UBXN4-207ENST00000471246 ETV2O00321 342 aaPredicted RBP2.79□□□□□ -1.96
UBXN4-207ENST00000471246 NFICP08651 508 aa2.79□□□□□ -1.96
UBXN4-207ENST00000471246 MAPK1P28482 360 aa2.79□□□□□ -1.96
UBXN4-207ENST00000471246 GSTM4Q03013 218 aa2.79□□□□□ -1.96
UBXN4-207ENST00000471246 KIAA0319Q5VV43 1072 aa2.79□□□□□ -1.96
UBXN4-207ENST00000471246 PRPF40BQ6NWY9 871 aaKnown RBP2.79□□□□□ -1.96
UBXN4-207ENST00000471246 MARCH10Q8NA82 808 aaPredicted RBP2.79□□□□□ -1.96
UBXN4-207ENST00000471246 CCDC74AQ96AQ1 378 aa2.79□□□□□ -1.96
UBXN4-207ENST00000471246 EHD4Q9H223 541 aa2.79□□□□□ -1.96
UBXN4-207ENST00000471246 ZNF576Q9H609 170 aa2.79□□□□□ -1.96
UBXN4-207ENST00000471246 NSUN3Q9H649 340 aaKnown RBP2.79□□□□□ -1.96
UBXN4-207ENST00000471246 U3KQE9 123 aa2.79□□□□□ -1.96
UBXN4-207ENST00000471246 ADAMTS20P59510 1910 aa2.79□□□□□ -1.96
UBXN4-207ENST00000471246 PNMA6FA0A0J9YX94 578 aa2.78□□□□□ -1.96
UBXN4-207ENST00000471246 GADD45BO75293 160 aaPredicted RBP2.78□□□□□ -1.96
UBXN4-207ENST00000471246 DLGAP3O95886 979 aa2.78□□□□□ -1.96
UBXN4-207ENST00000471246 B3GALT4O96024 378 aa2.78□□□□□ -1.96
UBXN4-207ENST00000471246 CTSBP07858 339 aa2.78□□□□□ -1.96
UBXN4-207ENST00000471246 GLDCP23378 1020 aa2.78□□□□□ -1.96
UBXN4-207ENST00000471246 ITPKAP23677 461 aa2.78□□□□□ -1.96
UBXN4-207ENST00000471246 KCNA1Q09470 495 aa2.78□□□□□ -1.96
UBXN4-207ENST00000471246 GRM2Q14416 872 aa2.78□□□□□ -1.96
UBXN4-207ENST00000471246 ZNF423Q2M1K9 1284 aa2.78□□□□□ -1.96
UBXN4-207ENST00000471246 OGFOD3Q6PK18 319 aa2.78□□□□□ -1.96
UBXN4-207ENST00000471246 PI16Q6UXB8 463 aa2.78□□□□□ -1.96
UBXN4-207ENST00000471246 TRIM56Q9BRZ2 755 aaKnown RBP2.78□□□□□ -1.96
UBXN4-207ENST00000471246 MENTQ9BUN1 341 aa2.78□□□□□ -1.96
UBXN4-207ENST00000471246 CYP4F12Q9HCS2 524 aa2.78□□□□□ -1.96
UBXN4-207ENST00000471246 C1GALT1Q9NS00 363 aa2.78□□□□□ -1.96
UBXN4-207ENST00000471246 TREHO43280 583 aa2.77□□□□□ -1.97
UBXN4-207ENST00000471246 EIF4EBP3O60516 100 aaPredicted RBP2.77□□□□□ -1.97
UBXN4-207ENST00000471246 ECEL1O95672 775 aa2.77□□□□□ -1.97
UBXN4-207ENST00000471246 MAOBP27338 520 aa2.77□□□□□ -1.97
UBXN4-207ENST00000471246 AFMP43652 599 aa2.77□□□□□ -1.97
UBXN4-207ENST00000471246 DSC3Q14574 896 aa2.77□□□□□ -1.97
UBXN4-207ENST00000471246 POU4F3Q15319 338 aa2.77□□□□□ -1.97
UBXN4-207ENST00000471246 AOC3Q16853 763 aa2.77□□□□□ -1.97
UBXN4-207ENST00000471246 SEZ6L2Q6UXD5 910 aa2.77□□□□□ -1.97
UBXN4-207ENST00000471246 FAM181AQ8N9Y4 354 aa2.77□□□□□ -1.97
UBXN4-207ENST00000471246 EPS8L3Q8TE67 593 aaKnown RBP2.77□□□□□ -1.97
UBXN4-207ENST00000471246 TRAIPQ9BWF2 469 aa2.77□□□□□ -1.97
UBXN4-207ENST00000471246 XYLT2Q9H1B5 865 aa2.77□□□□□ -1.97
UBXN4-207ENST00000471246 TRAK1Q9UPV9 953 aa2.77□□□□□ -1.97
UBXN4-207ENST00000471246 MYRFQ9Y2G1 1151 aa2.77□□□□□ -1.97
UBXN4-207ENST00000471246 TMEM238LA0A1B0GVL6 79 aa2.76□□□□□ -1.97
UBXN4-207ENST00000471246 TRIM13O60858 407 aa2.76□□□□□ -1.97
UBXN4-207ENST00000471246 CYP11A1P05108 521 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms