RNA–Protein interactions for RNA: ENST00000471165.1

CLIP4-209, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-209ENST00000471165 ATXN3LQ9H3M9 355 aa6.96□□□□□ -1.3
CLIP4-209ENST00000471165 CARS2Q9HA77 564 aaKnown RBP6.96□□□□□ -1.3
CLIP4-209ENST00000471165 LATS2Q9NRM7 1088 aa6.96□□□□□ -1.3
CLIP4-209ENST00000471165 TRIM13O60858 407 aa6.95□□□□□ -1.3
CLIP4-209ENST00000471165 NKPD1Q17RQ9 610 aa6.95□□□□□ -1.3
CLIP4-209ENST00000471165 FAM214BQ7L5A3 538 aa6.95□□□□□ -1.3
CLIP4-209ENST00000471165 XYLT2Q9H1B5 865 aa6.94□□□□□ -1.3
CLIP4-209ENST00000471165 A0A096LPE4 126 aa6.93□□□□□ -1.3
CLIP4-209ENST00000471165 A0A1W2PPZ6 126 aa6.93□□□□□ -1.3
CLIP4-209ENST00000471165 LMOD1P29536 600 aaPredicted RBP6.93□□□□□ -1.3
CLIP4-209ENST00000471165 C8orf34Q49A92 452 aa6.93□□□□□ -1.3
CLIP4-209ENST00000471165 BAHD1Q8TBE0 780 aaPredicted RBP6.93□□□□□ -1.3
CLIP4-209ENST00000471165 EDEM1Q92611 657 aa6.93□□□□□ -1.3
CLIP4-209ENST00000471165 DISC1Q9NRI5 854 aa6.93□□□□□ -1.3
CLIP4-209ENST00000471165 PCOLCE2Q9UKZ9 415 aa6.93□□□□□ -1.3
CLIP4-209ENST00000471165 RNGTTO60942 597 aaKnown RBP6.92□□□□□ -1.3
CLIP4-209ENST00000471165 TTLL4Q14679 1199 aa6.92□□□□□ -1.3
CLIP4-209ENST00000471165 SWI5Q1ZZU3 235 aa6.92□□□□□ -1.3
CLIP4-209ENST00000471165 ABHD4Q8TB40 342 aa6.92□□□□□ -1.3
CLIP4-209ENST00000471165 DDX54Q8TDD1 881 aaKnown RBP6.92□□□□□ -1.3
CLIP4-209ENST00000471165 WDR89Q96FK6 387 aaPredicted RBP6.92□□□□□ -1.3
CLIP4-209ENST00000471165 ADAMTS20P59510 1910 aa6.91□□□□□ -1.3
CLIP4-209ENST00000471165 IGF2BP3O00425 579 aaKnown RBP eCLIP6.91□□□□□ -1.3
CLIP4-209ENST00000471165 PCSK2P16519 638 aa6.91□□□□□ -1.3
CLIP4-209ENST00000471165 LIG1P18858 919 aa6.91□□□□□ -1.3
CLIP4-209ENST00000471165 CLCN7P51798 805 aa6.91□□□□□ -1.3
CLIP4-209ENST00000471165 ID3Q02535 119 aa6.91□□□□□ -1.3
CLIP4-209ENST00000471165 TCERG1LQ5VWI1 586 aa6.91□□□□□ -1.3
CLIP4-209ENST00000471165 GTF2IRD1Q9UHL9 959 aa6.91□□□□□ -1.3
CLIP4-209ENST00000471165 OVOL3O00110 214 aa6.9□□□□□ -1.3
CLIP4-209ENST00000471165 PHACTR2O75167 634 aa6.9□□□□□ -1.3
CLIP4-209ENST00000471165 HCLS1P14317 486 aaPredicted RBP6.9□□□□□ -1.3
CLIP4-209ENST00000471165 DNM1Q05193 864 aaKnown RBP6.9□□□□□ -1.3
CLIP4-209ENST00000471165 SPRED3Q2MJR0 410 aa6.9□□□□□ -1.3
CLIP4-209ENST00000471165 ERICH6BQ5W0A0 696 aa6.9□□□□□ -1.3
CLIP4-209ENST00000471165 B3GALT4O96024 378 aa6.89□□□□□ -1.31
CLIP4-209ENST00000471165 PDGFAP04085 211 aa6.89□□□□□ -1.31
CLIP4-209ENST00000471165 TTC16Q8NEE8 873 aa6.89□□□□□ -1.31
CLIP4-209ENST00000471165 CRELD1Q96HD1 420 aa6.89□□□□□ -1.31
CLIP4-209ENST00000471165 ACIN1Q9UKV3 1341 aaKnown RBP6.89□□□□□ -1.31
CLIP4-209ENST00000471165 OTOL1A6NHN0 477 aaPredicted RBP6.88□□□□□ -1.31
CLIP4-209ENST00000471165 SLFN14P0C7P3 912 aa6.88□□□□□ -1.31
CLIP4-209ENST00000471165 INSRRP14616 1297 aa6.88□□□□□ -1.31
CLIP4-209ENST00000471165 GRIA4P48058 902 aa6.88□□□□□ -1.31
CLIP4-209ENST00000471165 DLG4P78352 724 aa6.88□□□□□ -1.31
CLIP4-209ENST00000471165 PUM1Q14671 1186 aaKnown RBP eCLIP6.88□□□□□ -1.31
CLIP4-209ENST00000471165 NPAS4Q8IUM7 802 aa6.88□□□□□ -1.31
CLIP4-209ENST00000471165 ATP13A1Q9HD20 1204 aa6.88□□□□□ -1.31
CLIP4-209ENST00000471165 CXXC1Q9P0U4 656 aaPredicted RBP6.88□□□□□ -1.31
CLIP4-209ENST00000471165 AKAP8O43823 692 aaKnown RBP6.87□□□□□ -1.31
CLIP4-209ENST00000471165 TNFRSF21O75509 655 aa6.87□□□□□ -1.31
CLIP4-209ENST00000471165 CCNJLQ8IV13 435 aa6.87□□□□□ -1.31
CLIP4-209ENST00000471165 CCDC120Q96HB5 630 aa6.87□□□□□ -1.31
CLIP4-209ENST00000471165 CCDC86Q9H6F5 360 aaKnown RBP6.87□□□□□ -1.31
CLIP4-209ENST00000471165 CNOT6Q9ULM6 557 aaKnown RBP6.87□□□□□ -1.31
CLIP4-209ENST00000471165 NOVA2Q9UNW9 492 aaKnown RBP6.87□□□□□ -1.31
CLIP4-209ENST00000471165 NEFMP07197 916 aa6.86□□□□□ -1.31
CLIP4-209ENST00000471165 RAC2P15153 192 aa6.86□□□□□ -1.31
CLIP4-209ENST00000471165 UBTFP17480 764 aaKnown RBP6.86□□□□□ -1.31
CLIP4-209ENST00000471165 SPATS1Q496A3 300 aa6.86□□□□□ -1.31
CLIP4-209ENST00000471165 SEMA3GQ9NS98 782 aa6.86□□□□□ -1.31
CLIP4-209ENST00000471165 PCDHGC5Q9Y5F6 944 aa6.86□□□□□ -1.31
CLIP4-209ENST00000471165 GNAT3A8MTJ3 354 aa6.85□□□□□ -1.31
CLIP4-209ENST00000471165 ZNF862O60290 1169 aa6.85□□□□□ -1.31
CLIP4-209ENST00000471165 SASH1O94885 1247 aa6.85□□□□□ -1.31
CLIP4-209ENST00000471165 EFEMP1Q12805 493 aa6.85□□□□□ -1.31
CLIP4-209ENST00000471165 AP3B2Q13367 1082 aa6.85□□□□□ -1.31
CLIP4-209ENST00000471165 ZNF385BQ569K4 471 aa6.85□□□□□ -1.31
CLIP4-209ENST00000471165 SNX29Q8TEQ0 813 aa6.85□□□□□ -1.31
CLIP4-209ENST00000471165 ISL2Q96A47 359 aa6.85□□□□□ -1.31
CLIP4-209ENST00000471165 MCOLN1Q9GZU1 580 aa6.85□□□□□ -1.31
CLIP4-209ENST00000471165 FOXD3Q9UJU5 478 aaPredicted RBP6.85□□□□□ -1.31
CLIP4-209ENST00000471165 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.84□□□□□ -1.31
CLIP4-209ENST00000471165 ALPK1Q96QP1 1244 aa6.84□□□□□ -1.31
CLIP4-209ENST00000471165 TCF12Q99081 682 aa6.84□□□□□ -1.31
CLIP4-209ENST00000471165 SSU72Q9NP77 194 aaKnown RBP6.84□□□□□ -1.31
CLIP4-209ENST00000471165 AMOTL2Q9Y2J4 779 aa6.84□□□□□ -1.31
CLIP4-209ENST00000471165 MZF1P28698 734 aaPredicted RBP6.83□□□□□ -1.32
CLIP4-209ENST00000471165 FAM69CQ0P6D2 419 aa6.83□□□□□ -1.32
CLIP4-209ENST00000471165 KIF4BQ2VIQ3 1234 aa6.83□□□□□ -1.32
CLIP4-209ENST00000471165 HSPA12BQ96MM6 686 aa6.83□□□□□ -1.32
CLIP4-209ENST00000471165 ZC3H12CQ9C0D7 883 aaKnown RBP6.83□□□□□ -1.32
CLIP4-209ENST00000471165 KCTD3Q9Y597 815 aa6.83□□□□□ -1.32
CLIP4-209ENST00000471165 RFX1P22670 979 aa6.82□□□□□ -1.32
CLIP4-209ENST00000471165 TTC6Q86TZ1 520 aa6.82□□□□□ -1.32
CLIP4-209ENST00000471165 TMEM151BQ8IW70 566 aa6.82□□□□□ -1.32
CLIP4-209ENST00000471165 MYLIPQ8WY64 445 aa6.82□□□□□ -1.32
CLIP4-209ENST00000471165 LIN7BQ9HAP6 207 aa6.82□□□□□ -1.32
CLIP4-209ENST00000471165 MYRFQ9Y2G1 1151 aa6.82□□□□□ -1.32
CLIP4-209ENST00000471165 ERVFC1P60507 584 aa6.81□□□□□ -1.32
CLIP4-209ENST00000471165 CDCA8Q53HL2 280 aa6.81□□□□□ -1.32
CLIP4-209ENST00000471165 PRDM10Q9NQV6 1147 aa6.81□□□□□ -1.32
CLIP4-209ENST00000471165 MYOCOSA0A1B0GUC4 107 aa6.8□□□□□ -1.32
CLIP4-209ENST00000471165 A0A1W2PP55 124 aa6.8□□□□□ -1.32
CLIP4-209ENST00000471165 SEMA7AO75326 666 aa6.8□□□□□ -1.32
CLIP4-209ENST00000471165 FEZF2Q8TBJ5 459 aa6.8□□□□□ -1.32
CLIP4-209ENST00000471165 ZNF576Q9H609 170 aa6.8□□□□□ -1.32
CLIP4-209ENST00000471165 SLAMF8Q9P0V8 285 aa6.8□□□□□ -1.32
CLIP4-209ENST00000471165 RFXAPO00287 272 aa6.79□□□□□ -1.32
CLIP4-209ENST00000471165 POLR3DP05423 398 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms