RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 C12orf60Q5U649 245 aa10.54□□□□□ -0.72
LMCD1-207ENST00000470776 MTMR14Q8NCE2 650 aa10.54□□□□□ -0.72
LMCD1-207ENST00000470776 JDP2Q8WYK2 163 aa10.54□□□□□ -0.72
LMCD1-207ENST00000470776 FBXW7Q969H0 707 aa10.54□□□□□ -0.72
LMCD1-207ENST00000470776 TMX3Q96JJ7 454 aa10.54□□□□□ -0.72
LMCD1-207ENST00000470776 ZSCAN31Q96LW9 406 aaPredicted RBP10.54□□□□□ -0.72
LMCD1-207ENST00000470776 RNF41Q9H4P4 317 aaPredicted RBP10.54□□□□□ -0.72
LMCD1-207ENST00000470776 CNNM2Q9H8M5 875 aa10.54□□□□□ -0.72
LMCD1-207ENST00000470776 ARPP21Q9UBL0 812 aaPredicted RBP10.54□□□□□ -0.72
LMCD1-207ENST00000470776 LIMCH1Q9UPQ0 1083 aa10.54□□□□□ -0.72
LMCD1-207ENST00000470776 CCDC88AQ3V6T2 1871 aa10.53□□□□□ -0.72
LMCD1-207ENST00000470776 F8W031 263 aaPredicted RBP10.53□□□□□ -0.72
LMCD1-207ENST00000470776 WDHD1O75717 1129 aaPredicted RBP10.53□□□□□ -0.72
LMCD1-207ENST00000470776 YBX3P16989 372 aaKnown RBP eCLIP10.53□□□□□ -0.72
LMCD1-207ENST00000470776 PTMSP20962 102 aa10.53□□□□□ -0.72
LMCD1-207ENST00000470776 RPS12P25398 132 aaKnown RBP10.53□□□□□ -0.72
LMCD1-207ENST00000470776 YY1P25490 414 aa10.53□□□□□ -0.72
LMCD1-207ENST00000470776 MCM5P33992 734 aa10.53□□□□□ -0.72
LMCD1-207ENST00000470776 DDIT3P35638 169 aa10.53□□□□□ -0.72
LMCD1-207ENST00000470776 USP5P45974 858 aa10.53□□□□□ -0.72
LMCD1-207ENST00000470776 CIAPIN1Q6FI81 312 aa10.53□□□□□ -0.72
LMCD1-207ENST00000470776 CDC42EP5Q6NZY7 148 aa10.53□□□□□ -0.72
LMCD1-207ENST00000470776 MFSD6Q6ZSS7 791 aa10.53□□□□□ -0.72
LMCD1-207ENST00000470776 KIAA0825Q8IV33 1275 aa10.53□□□□□ -0.72
LMCD1-207ENST00000470776 TEX11Q8IYF3 940 aa10.53□□□□□ -0.72
LMCD1-207ENST00000470776 TGFBRAP1Q8WUH2 860 aa10.53□□□□□ -0.72
LMCD1-207ENST00000470776 INTS4Q96HW7 963 aaKnown RBP10.53□□□□□ -0.72
LMCD1-207ENST00000470776 IDI2Q9BXS1 227 aa10.53□□□□□ -0.72
LMCD1-207ENST00000470776 KRT23Q9C075 422 aa10.53□□□□□ -0.72
LMCD1-207ENST00000470776 SH2B1Q9NRF2 756 aaPredicted RBP10.53□□□□□ -0.72
LMCD1-207ENST00000470776 TAOK2Q9UL54 1235 aa10.53□□□□□ -0.72
LMCD1-207ENST00000470776 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.53□□□□□ -0.72
LMCD1-207ENST00000470776 SCN9AQ15858 1988 aa10.53□□□□□ -0.72
LMCD1-207ENST00000470776 ARFGEF1Q9Y6D6 1849 aa10.53□□□□□ -0.72
LMCD1-207ENST00000470776 TIAM2Q8IVF5 1701 aa10.53□□□□□ -0.72
LMCD1-207ENST00000470776 ROBO3Q96MS0 1386 aa10.52□□□□□ -0.72
LMCD1-207ENST00000470776 ORC4O43929 436 aa10.52□□□□□ -0.73
LMCD1-207ENST00000470776 RAD17O75943 681 aa10.52□□□□□ -0.73
LMCD1-207ENST00000470776 SCNN1DP51172 638 aa10.52□□□□□ -0.73
LMCD1-207ENST00000470776 ANTXR2P58335 489 aa10.52□□□□□ -0.73
LMCD1-207ENST00000470776 CTDSPL2Q05D32 466 aa10.52□□□□□ -0.73
LMCD1-207ENST00000470776 TRDNQ13061 729 aa10.52□□□□□ -0.73
LMCD1-207ENST00000470776 TNIP1Q15025 636 aa10.52□□□□□ -0.73
LMCD1-207ENST00000470776 GPR162Q16538 588 aa10.52□□□□□ -0.73
LMCD1-207ENST00000470776 Q6ZUG5 572 aa10.52□□□□□ -0.73
LMCD1-207ENST00000470776 RALYLQ86SE5 291 aaKnown RBP10.52□□□□□ -0.73
LMCD1-207ENST00000470776 DPF2Q92785 391 aa10.52□□□□□ -0.73
LMCD1-207ENST00000470776 ZBED3Q96IU2 234 aaPredicted RBP10.52□□□□□ -0.73
LMCD1-207ENST00000470776 TMEM87BQ96K49 555 aa10.52□□□□□ -0.73
LMCD1-207ENST00000470776 USP40Q9NVE5 1235 aa10.52□□□□□ -0.73
LMCD1-207ENST00000470776 HDAC9Q9UKV0 1011 aa10.52□□□□□ -0.73
LMCD1-207ENST00000470776 FLT1P17948 1338 aa10.52□□□□□ -0.73
LMCD1-207ENST00000470776 NEDD4P46934 1319 aa10.52□□□□□ -0.73
LMCD1-207ENST00000470776 MINDY4BA8MYZ0 360 aa10.51□□□□□ -0.73
LMCD1-207ENST00000470776 B4E1Z4 1266 aa10.51□□□□□ -0.73
LMCD1-207ENST00000470776 SLC3A2P08195 630 aaKnown RBP10.51□□□□□ -0.73
LMCD1-207ENST00000470776 USP17L8P0C7I0 530 aa10.51□□□□□ -0.73
LMCD1-207ENST00000470776 ZNF280AP59817 542 aaPredicted RBP10.51□□□□□ -0.73
LMCD1-207ENST00000470776 RASSF7Q02833 373 aa10.51□□□□□ -0.73
LMCD1-207ENST00000470776 NKX2-3Q8TAU0 364 aa10.51□□□□□ -0.73
LMCD1-207ENST00000470776 IGDCC4Q8TDY8 1250 aa10.51□□□□□ -0.73
LMCD1-207ENST00000470776 CWC22Q9HCG8 908 aaKnown RBP10.51□□□□□ -0.73
LMCD1-207ENST00000470776 MCM9Q9NXL9 1143 aa10.51□□□□□ -0.73
LMCD1-207ENST00000470776 ZSWIM5Q9P217 1185 aa10.51□□□□□ -0.73
LMCD1-207ENST00000470776 TPCN1Q9ULQ1 816 aa10.51□□□□□ -0.73
LMCD1-207ENST00000470776 PSME4Q14997 1843 aa10.51□□□□□ -0.73
LMCD1-207ENST00000470776 CYP2D7A0A087X1C5 515 aa10.5□□□□□ -0.73
LMCD1-207ENST00000470776 DCAF8L1A6NGE4 600 aa10.5□□□□□ -0.73
LMCD1-207ENST00000470776 SMIM22K7EJ46 135 aa10.5□□□□□ -0.73
LMCD1-207ENST00000470776 PRC1O43663 620 aa10.5□□□□□ -0.73
LMCD1-207ENST00000470776 ENTPD3O75355 529 aa10.5□□□□□ -0.73
LMCD1-207ENST00000470776 LMNB1P20700 586 aa10.5□□□□□ -0.73
LMCD1-207ENST00000470776 LIFRP42702 1097 aa10.5□□□□□ -0.73
LMCD1-207ENST00000470776 ME3Q16798 604 aa10.5□□□□□ -0.73
LMCD1-207ENST00000470776 CFAP100Q494V2 611 aa10.5□□□□□ -0.73
LMCD1-207ENST00000470776 ARHGAP27Q6ZUM4 889 aa10.5□□□□□ -0.73
LMCD1-207ENST00000470776 CYB5R4Q7L1T6 521 aa10.5□□□□□ -0.73
LMCD1-207ENST00000470776 MAPKAPK5Q8IW41 473 aa10.5□□□□□ -0.73
LMCD1-207ENST00000470776 ZNF274Q96GC6 653 aaPredicted RBP10.5□□□□□ -0.73
LMCD1-207ENST00000470776 PRMT6Q96LA8 375 aaPredicted RBP10.5□□□□□ -0.73
LMCD1-207ENST00000470776 TCEANC2Q96MN5 208 aa10.5□□□□□ -0.73
LMCD1-207ENST00000470776 INCENPQ9NQS7 918 aa10.5□□□□□ -0.73
LMCD1-207ENST00000470776 CIZ1Q9ULV3 898 aaPredicted RBP10.5□□□□□ -0.73
LMCD1-207ENST00000470776 ZBTB12Q9Y330 459 aaPredicted RBP10.5□□□□□ -0.73
LMCD1-207ENST00000470776 LAMA4Q16363 1823 aa10.49□□□□□ -0.73
LMCD1-207ENST00000470776 SPDYE2BA6NHP3 402 aa10.49□□□□□ -0.73
LMCD1-207ENST00000470776 SH2B2O14492 632 aaPredicted RBP10.49□□□□□ -0.73
LMCD1-207ENST00000470776 LARGE1O95461 756 aa10.49□□□□□ -0.73
LMCD1-207ENST00000470776 POLR3DP05423 398 aaPredicted RBP10.49□□□□□ -0.73
LMCD1-207ENST00000470776 SPDYE6P0CI01 402 aa10.49□□□□□ -0.73
LMCD1-207ENST00000470776 CYP2D6P10635 497 aa10.49□□□□□ -0.73
LMCD1-207ENST00000470776 PLCD1P51178 756 aa10.49□□□□□ -0.73
LMCD1-207ENST00000470776 EIF6P56537 245 aaKnown RBP10.49□□□□□ -0.73
LMCD1-207ENST00000470776 GABPAQ06546 454 aa10.49□□□□□ -0.73
LMCD1-207ENST00000470776 PDE4BQ07343 736 aa10.49□□□□□ -0.73
LMCD1-207ENST00000470776 ST3GAL1Q11201 340 aa10.49□□□□□ -0.73
LMCD1-207ENST00000470776 L1TD1Q5T7N2 865 aaKnown RBP10.49□□□□□ -0.73
LMCD1-207ENST00000470776 FKBP1CQ5VVH2 108 aa10.49□□□□□ -0.73
LMCD1-207ENST00000470776 C16orf86Q6ZW13 317 aa10.49□□□□□ -0.73
LMCD1-207ENST00000470776 TTC6Q86TZ1 520 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms